Basic Information

Insect: Trichogramma dendrolimi
Gene Symbol: -
Assembly: GCA_034770305.1
Location: JAPMIB010000001.1:3252279-3253733[+]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.12 24 5.8 7.0 17 44 178 202 166 202 0.90

2 9 0.011 2.1 9.2 1.4 19 43 208 229 206 230 0.93

3 9 0.0012 0.23 12.3 1.0 18 44 235 258 233 258 0.95

4 9 0.001 0.2 12.5 3.2 18 43 263 285 261 286 0.95

5 9 0.051 10 7.0 1.2 18 43 291 313 289 314 0.82

6 9 0.0004 0.079 13.8 3.0 18 44 319 342 317 342 0.96

7 9 0.00016 0.031 15.1 3.4 18 44 347 370 345 370 0.96

8 9 0.13 26 5.7 4.7 18 43 375 397 373 398 0.93

9 9 8.2e-05 0.016 16.0 2.2 18 44 403 426 401 426 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.12	24	5.8	7.0	17	44	178	202	166	202	0.90
2	9	0.011	2.1	9.2	1.4	19	43	208	229	206	230	0.93
3	9	0.0012	0.23	12.3	1.0	18	44	235	258	233	258	0.95
4	9	0.001	0.2	12.5	3.2	18	43	263	285	261	286	0.95
5	9	0.051	10	7.0	1.2	18	43	291	313	289	314	0.82
6	9	0.0004	0.079	13.8	3.0	18	44	319	342	317	342	0.96
7	9	0.00016	0.031	15.1	3.4	18	44	347	370	345	370	0.96
8	9	0.13	26	5.7	4.7	18	43	375	397	373	398	0.93
9	9	8.2e-05	0.016	16.0	2.2	18	44	403	426	401	426	0.95

Sequence Information

Coding Sequence: ATGGATTGTGAAGGTTCATTTAATTGTGCGGTCAGAGTAAAAGAAGAACCTTGTGATGCGATGCTAACAGAAAATGATGATGAAGTAATTGACGAGAAGCCCgacgttaaaaatattcgattCATTAGAGAATATTCAaCGCTTCAAAAGTGTAATGAAAATCACGAAACTGAACTTGACGACGTACACATTGAACTCGAGTGTAAAGATGAGAAGCCTGACATGAAATTATTGGtatttaagaaaattgaaaactattCTCAAAACCACTTGCACAGTGAAAATCATACAACTCAAAGCACAATTAAAAGAGAAAGTGAGGACAGGATGAGACAAGAAATGGATTTTAATTTACACAGTGAAgtcaaagagaaaaataaaaagagaagagataCAAAAAAGTATATCGGTAAACTCAACATCCACATTTTTAACGGTACAACACATCCTTGCAATACACgtgaaaagttatttaaacgaaaaagttaTCTTGATAGACATGTTGAATCGACGCATAATGGTGTTATTAAACATACATGTAATACATGCGGTAAGTCATATACTAAAAAAAGTagtctcaaaactcacatcaaCGTAATGCATAATGGTTTCACACATCCATGCGATGTGTGCCAAAAGAAATTCGCATATAAGAGTTGTCTCCGCGCTCACATCAATTttgtgcacaatggtgtcacctATACATGTGATACTtgcggaaagacattttcacaaaaaaaaaatctcaaagttcACATAAATGCAAAGCACAATGGCGTCACCCATACATGTGGTATATGTGAAGAGACGTTTAATCGAAAGAACAATCTGAATAGGCATGTTCGATCGACGCATCTAGGTATCACCTATACATGTGGAAtatgtggaaagacattcgTACAGAAAGGTCATCTCAAAGTTCACATAAATGCAAAGCACAATGGCGTCACCCATACATGTGGTATATGTGAAAAGACGTTTACTCACAAGAGCAATCTGTATAAGCATGTTCAATCGGCGCATCAAGGTATCACCCATACATGTGGTATATGTGAAAAGACGTTTAATCACAAGAGCAATCTGTATAGGCATGTTCAATCGGCGCATCAAGGTATCACCCATACATGTGGTATATGTGAAAAGACGTTTAATCTCAAGAGCCATCTGAATAGGCATGTTCGATCGACGCATCTAGGTATCACCTATACATGTGGTATATGTGAAAAGACGTTTAATCACAAGAGCAATCTGTATAGGCATGTTCGATCGGTGCATCAAGGTATCACCCATAAATGA
Protein Sequence: MDCEGSFNCAVRVKEEPCDAMLTENDDEVIDEKPDVKNIRFIREYSTLQKCNENHETELDDVHIELECKDEKPDMKLLVFKKIENYSQNHLHSENHTTQSTIKRESEDRMRQEMDFNLHSEVKEKNKKRRDTKKYIGKLNIHIFNGTTHPCNTREKLFKRKSYLDRHVESTHNGVIKHTCNTCGKSYTKKSSLKTHINVMHNGFTHPCDVCQKKFAYKSCLRAHINFVHNGVTYTCDTCGKTFSQKKNLKVHINAKHNGVTHTCGICEETFNRKNNLNRHVRSTHLGITYTCGICGKTFVQKGHLKVHINAKHNGVTHTCGICEKTFTHKSNLYKHVQSAHQGITHTCGICEKTFNHKSNLYRHVQSAHQGITHTCGICEKTFNLKSHLNRHVRSTHLGITYTCGICEKTFNHKSNLYRHVRSVHQGITHK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01482914;
90% Identity: iTF_01482914;
80% Identity: iTF_01482914;