Basic Information

Insect: Trichogramma dendrolimi
Gene Symbol: -
Assembly: GCA_034770305.1
Location: JAPMIB010000103.1:377269-379024[-]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 8.3 1.6e+03 -0.0 0.2 26 43 139 156 137 157 0.83

2 14 6.1 1.2e+03 0.4 0.9 21 43 175 194 174 195 0.79

3 14 0.69 1.4e+02 3.4 3.3 17 44 199 223 184 223 0.82

4 14 0.26 52 4.8 2.2 19 37 229 244 226 255 0.78

5 14 0.036 7.2 7.5 3.0 4 44 243 279 240 279 0.79

6 14 0.022 4.4 8.2 0.0 18 43 284 306 282 307 0.92

7 14 0.0017 0.34 11.8 0.4 18 44 312 335 309 335 0.92

8 14 0.29 57 4.6 0.0 18 43 340 362 338 363 0.87

9 14 0.00012 0.023 15.5 0.3 18 43 368 390 365 391 0.92

10 14 0.0013 0.25 12.2 2.2 18 44 396 419 394 419 0.91

11 14 0.037 7.2 7.5 0.0 18 44 424 447 422 447 0.91

12 14 0.45 89 4.0 0.3 18 43 452 474 448 475 0.78

13 14 0.0005 0.097 13.5 0.5 19 44 481 503 477 503 0.93

14 14 4.9 9.7e+02 0.7 0.3 18 29 508 519 506 526 0.75

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	8.3	1.6e+03	-0.0	0.2	26	43	139	156	137	157	0.83
2	14	6.1	1.2e+03	0.4	0.9	21	43	175	194	174	195	0.79
3	14	0.69	1.4e+02	3.4	3.3	17	44	199	223	184	223	0.82
4	14	0.26	52	4.8	2.2	19	37	229	244	226	255	0.78
5	14	0.036	7.2	7.5	3.0	4	44	243	279	240	279	0.79
6	14	0.022	4.4	8.2	0.0	18	43	284	306	282	307	0.92
7	14	0.0017	0.34	11.8	0.4	18	44	312	335	309	335	0.92
8	14	0.29	57	4.6	0.0	18	43	340	362	338	363	0.87
9	14	0.00012	0.023	15.5	0.3	18	43	368	390	365	391	0.92
10	14	0.0013	0.25	12.2	2.2	18	44	396	419	394	419	0.91
11	14	0.037	7.2	7.5	0.0	18	44	424	447	422	447	0.91
12	14	0.45	89	4.0	0.3	18	43	452	474	448	475	0.78
13	14	0.0005	0.097	13.5	0.5	19	44	481	503	477	503	0.93
14	14	4.9	9.7e+02	0.7	0.3	18	29	508	519	506	526	0.75

Sequence Information

Coding Sequence: ATGGAATCGAGCGGAATGTTTAACTGTGTCGTCAgaGTGAAAAGTGAACCTATTGATTTGTCATTTGCTGAGAATGAGTATAATAGTATTGACGAGACActcgatgataaaaattttgtattttccaGATGTCCGCAAGAATACCCAATTCGCGTGCTTCGAAAATCTGACGAAAGTCACGAAGGTGAACTTGACGAGTTGACGATAGAATTGGAATGTAAAGAACAGAAGCCCAAAATTGATTTACTAGCGGTTACgaagattgaaaattcgtTCCAAAATCACTCGCAGCATATGGAAGATAGAAATGGTTATCAAGTTCGAGgtgaaattaaaatagaaaatttggGAGCAATGAAAAAGGAATCATTCGCGGACGACGCAAGCCAATTGAATGTTGAATTCGACTGTGGACTCAGCGAGACAAATGAAACTAGCTGTGCTAGAAACAAGTTGAACAATAAATGTAGCCTCAAAACGCGCATCGGAACGGCACACAATGGTGTCACCAACACTCgtgatatttgtaaaaagaCTTGCGGATCTAAGAGTAATCTCCAAAAACACATTGATATGGTACATAATGAGATCTCTCATGCATGTAGTATTTGCGGAAACACATTCATACGAAAGATTAATCTAAAAATACACATTGACACGGAGCATAATGGAGTTAGatatgcatgtgatatttgcggaaagaaatacTCTCAGAAAATTCATctgaaaaaacacatcgattctGCGCCTCATAAAATCGAACATGAATGTGATCgttgtggaaaaaaattttcgacgaAGAGTAATCTCAACAAACACATCGATGTGGCGCACAATGGTATCGCCCCTATCTGTGAGACATGTGGTAAGATATTTGCACGACTGGATGTTCTCAAACGCCATATCAATTCGGTACATGataaaatcactcatgaatgtgatatttgcggaaagaaattctcaGGCAAGTGGAATCTCAAGAATCACATCGATGTGGCGCACAATGGTATCGCCCCTATCTGTGAGACATGTGGTAAGACATTTGCACGACTGGATGTTCTCCAACGCCATATCAATTCGATACATGACAAAATCCCtcatgaatgtgatatttgcggcaAAAAATTCTCAGacaagagtaatctcaaaagACACATTGATGCAacgcacaatggtgtcacacatACTTGTGAtatatgcaaaaagaaattctcCACTAGCAATAATCTAAAAAATCACATCGATGTGGCGCACAATGGTATCGTCCCTATCTGTGAGACATGTGGTAAGACATTTGCACGACTGGATGTTCTCAAACGCCATATCGATTCGGTACATAACAAAATCATtcatgaatgtgatatttgcggcaAATCATTTACTCAACAAGTTAATCTCAAAATACACATCGATGTAGTGCACAATGGTGTTAggcatgcatgtgatatttgcggaaaaaaattctcagataagagtaatctcaagaaacacatcgatgtggcgcacaatggtgtcacccATACTTGTGATCTTTGTGGaaaagacattttcaaaaaagaaatctcAAGAACACATCGATGTGGCGCACAATGGTATTAG
Protein Sequence: MESSGMFNCVVRVKSEPIDLSFAENEYNSIDETLDDKNFVFSRCPQEYPIRVLRKSDESHEGELDELTIELECKEQKPKIDLLAVTKIENSFQNHSQHMEDRNGYQVRGEIKIENLGAMKKESFADDASQLNVEFDCGLSETNETSCARNKLNNKCSLKTRIGTAHNGVTNTRDICKKTCGSKSNLQKHIDMVHNEISHACSICGNTFIRKINLKIHIDTEHNGVRYACDICGKKYSQKIHLKKHIDSAPHKIEHECDRCGKKFSTKSNLNKHIDVAHNGIAPICETCGKIFARLDVLKRHINSVHDKITHECDICGKKFSGKWNLKNHIDVAHNGIAPICETCGKTFARLDVLQRHINSIHDKIPHECDICGKKFSDKSNLKRHIDATHNGVTHTCDICKKKFSTSNNLKNHIDVAHNGIVPICETCGKTFARLDVLKRHIDSVHNKIIHECDICGKSFTQQVNLKIHIDVVHNGVRHACDICGKKFSDKSNLKKHIDVAHNGVTHTCDLCGKDIFKKEISRTHRCGAQWY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01482820;
90% Identity: iTF_01482820;
80% Identity: iTF_01482820;