Tden025245.1
Basic Information
- Insect
- Trichogramma dendrolimi
- Gene Symbol
- -
- Assembly
- GCA_034770305.1
- Location
- JAPMIB010000174.1:260580-262210[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 1.3 2.6e+02 2.5 0.4 19 30 136 147 127 156 0.77 2 11 0.003 0.58 11.0 0.1 18 43 162 184 157 185 0.90 3 11 0.0015 0.3 11.9 0.9 18 44 190 213 186 213 0.92 4 11 0.0051 1 10.2 1.1 18 43 218 240 215 241 0.84 5 11 0.076 15 6.5 0.5 19 44 247 269 242 269 0.92 6 11 0.0017 0.33 11.8 0.3 18 43 274 296 271 297 0.93 7 11 0.037 7.2 7.5 0.5 19 43 303 324 299 325 0.87 8 11 9.1e-05 0.018 15.8 0.3 18 43 330 352 327 353 0.94 9 11 0.037 7.3 7.5 0.4 19 43 359 380 356 381 0.88 10 11 0.086 17 6.3 0.5 19 31 387 399 384 402 0.86 11 11 0.83 1.6e+02 3.2 3.1 4 43 410 449 408 450 0.74
Sequence Information
- Coding Sequence
- ATGGAATCGGGTGATAATTTCAACGGTGATCTCAAAGTAAAACTAGAGCCACGCGATGTGTCtcttgatgatgatgaagattatcaaattaaattttccaaactTATGCATAAAAATCCAatccaaaattttaaacaagaATATGATGAATTGTCTGAACCTCAAGAAGAcatggaaataatttttgagtGTAAAGACGTAAAGCCCGTCGCGGGTTTATTAGTTGATAAAATTAACGATTATTCTCAAAATAACTTGCAGAATATGAATTACAGCGTTGACTGTAAAACTGAAACTAGTATTAAAATAGAGACCGAATgcaaagaggaagaagaaataaattcaaactATAAAAATAGACTCGATATACTTATCGATACAGGAAAAAAAGGTATTAGACATGCATGCGAtatatgcaaaaagaaattcgcTAAGTTGAGTAATCTCAAAAACACATTGATAGTGCACAATGGTGTTAGTTTTACATGTGGTATATGTGGTAAGACATTTGCACGACTGGATATTCTCAAACGCCATATCAATTCGATACATGACAAAATCACtcatgaatgtgatatttgcaaaaagaaattttcagaCAAGAGTAATCTCAAGAAACACGTTGACGTTGCGCACAATGGTGTTTCACATGTATGTAATATATGCGGAAAGAAGTTCTCAGAcaaaaattatcttaaaaaacACGTCGACTCGCTACATAATGGTATCACTCACTCATGTGATacatgcggaaagaaattctcaGACAAAAGTTATCTCAAGAAACACATCGATGCGGCGCACAATGGTGTCGTACATAGCTGTAAGACTTGTGGTAAGACATTTGCACAAGTGTATAATCTCAAAcgccacatcgattcggtacaTGACAAAGTCACTCATGCATGTGTTGTTTGCGGGAAGAAATTCTCAGCGAAGGGTAATCTGAAGAAACACATCGATGTGACGCACAATGGTGTTACATATACTTGTGAtgtatgcgaaaaaaaattctcaaacaAGAGTAATCTAAAAAAACACATTATTTCGGTACATGATAAAATCACTCATGCATGTGTTGTTTGCGGGAAGAAATTCTCAGAGAAGGGTAATCTTACGAAACACATTGATGTggcgcacaatggtgtcagacatgcatgtgatatttgcgaaaagaaattttcaggCAAGAATACTCTCAAGAAAccacatcgatgtggcgcacaatggtgtcacccATATTTGCATGTCGAATCATCGCATAATGCTATCACCTATACATGCGAGACATGTggtaaatcatttttacaaaagaaaaatcttaaaatgcACGTCGATGTGGCGCATCGCTGA
- Protein Sequence
- MESGDNFNGDLKVKLEPRDVSLDDDEDYQIKFSKLMHKNPIQNFKQEYDELSEPQEDMEIIFECKDVKPVAGLLVDKINDYSQNNLQNMNYSVDCKTETSIKIETECKEEEEINSNYKNRLDILIDTGKKGIRHACDICKKKFAKLSNLKNTLIVHNGVSFTCGICGKTFARLDILKRHINSIHDKITHECDICKKKFSDKSNLKKHVDVAHNGVSHVCNICGKKFSDKNYLKKHVDSLHNGITHSCDTCGKKFSDKSYLKKHIDAAHNGVVHSCKTCGKTFAQVYNLKRHIDSVHDKVTHACVVCGKKFSAKGNLKKHIDVTHNGVTYTCDVCEKKFSNKSNLKKHIISVHDKITHACVVCGKKFSEKGNLTKHIDVAHNGVRHACDICEKKFSGKNTLKKPHRCGAQWCHPYLHVESSHNAITYTCETCGKSFLQKKNLKMHVDVAHR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01482877;
- 90% Identity
- iTF_01482877;
- 80% Identity
- iTF_01482877;