Tden014720.1
Basic Information
- Insect
- Trichogramma dendrolimi
- Gene Symbol
- -
- Assembly
- GCA_034770305.1
- Location
- JAPMIB010000061.1:62171-63837[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.00049 0.096 13.5 2.1 16 43 69 93 62 94 0.90 2 11 0.002 0.39 11.6 1.7 18 44 99 122 96 122 0.91 3 11 0.034 6.7 7.6 0.5 19 43 128 149 125 150 0.91 4 11 0.00035 0.068 14.0 0.7 19 44 156 178 152 178 0.93 5 11 0.032 6.3 7.7 1.3 18 44 183 206 180 206 0.91 6 11 0.049 9.7 7.1 0.1 19 43 240 261 235 262 0.87 7 11 2.5 4.9e+02 1.6 0.8 19 30 268 281 265 294 0.71 8 11 0.0021 0.4 11.5 1.3 19 44 296 318 290 318 0.91 9 11 0.0046 0.9 10.4 0.9 19 43 324 345 320 346 0.93 10 11 0.00056 0.11 13.3 0.4 18 43 351 373 346 374 0.90 11 11 0.054 11 7.0 0.5 18 43 379 401 377 402 0.93
Sequence Information
- Coding Sequence
- ATGGGCTCCACTGATTTATTCAACCATGATATCAGAGTCAAACAAGAACCCAGCGATGAGTTGCTagatgaatattattataaaatgattgaCATTAATCCCGATttaagaatattatttaaatttttcaatttttgggAGAAAATTCATGAAAAGTTAAAAGATGGACTCAAAATAAGAACCAAAAAGGTTCATAATGGTACCACCCATACCTGTGATACATGTGGTAAGACATTTGCACAAACAGGTAATCTTAAACGCCATATCAATTCGGAACACGACAAAATCACTCATGAATGCAATATTTGCGGCAAATCATTTACTCGAAAACTTAATCTCAAAATACACATCGATTCAGTGCACAATGGTATCATCCATAGCTGTAAGACATGTGGTAAGACATTTGCACGACTGGATATTCTCAAACGCCACATCGATTCAGTACATGACAAAATCACTCATgattgtgatatttgcggaaagaaattttcagaCAAGAGTAATCTCAAGAAACACATCGATTCGCTGCATAATGGagttatacatacatgtgaAATATGCGAAAATAAATTCTTATATAAGAGAAATCTCAAGAATCACATCGACGTTGCGCACAATGGTCTCACTCATTCATGCGAcatgtgtgaaaaaaaatttagaacaaCAGCtcatctcaaaatccacaccGCCTCAGTGCACAATGGTGTTAGatatgcatgtgatatttgcgaaaagaaattttcagaCAAGAGTTATCTAAAAAAACACGTTGACGTTGCGCACAATGGTCTCACTCATTCATGCGAcatgtgtgaaaaaaaatttacaacaaaaagtTATCTCAAAATCCATACTGATTCAGTGCACAATGGTGTTAGACATGCATGTAATATTTGCGGCAAGAAATTCTCAGAGAAGAGTTATCTCAAGAAACACATTGATTCGCTGCATAATGGAGTTATACATGCATGTGAAatatgcgaaaagaaattcttatataagaaaaatctcaaaaagcaCATTGATTCGATACATGACAAAATCACtcatgaatgtgatatttgcggcaAGAAATACTCACAAAAGAGTGATCTCAAAAGACACATTGATGCAacgcacaatggtgtcacccATACTTGTGATgtatgcgaaaagaaattcttatataaaataaatctcaaaaaGCACATTGATTCGGTACATGATAATGTCGCGTggaaagaggaaaaatga
- Protein Sequence
- MGSTDLFNHDIRVKQEPSDELLDEYYYKMIDINPDLRILFKFFNFWEKIHEKLKDGLKIRTKKVHNGTTHTCDTCGKTFAQTGNLKRHINSEHDKITHECNICGKSFTRKLNLKIHIDSVHNGIIHSCKTCGKTFARLDILKRHIDSVHDKITHDCDICGKKFSDKSNLKKHIDSLHNGVIHTCEICENKFLYKRNLKNHIDVAHNGLTHSCDMCEKKFRTTAHLKIHTASVHNGVRYACDICEKKFSDKSYLKKHVDVAHNGLTHSCDMCEKKFTTKSYLKIHTDSVHNGVRHACNICGKKFSEKSYLKKHIDSLHNGVIHACEICEKKFLYKKNLKKHIDSIHDKITHECDICGKKYSQKSDLKRHIDATHNGVTHTCDVCEKKFLYKINLKKHIDSVHDNVAWKEEK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01482671;
- 90% Identity
- iTF_01482867;
- 80% Identity
- iTF_01482867;