Basic Information

Insect: Trichogramma dendrolimi
Gene Symbol: -
Assembly: GCA_034770305.1
Location: JAPMIB010000004.1:867171-869116[-]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 1.1 2.1e+02 2.8 1.6 16 43 170 194 156 195 0.78

2 15 6.2 1.2e+03 0.4 0.4 19 38 201 217 198 223 0.72

3 15 0.0013 0.25 12.2 1.2 6 44 217 252 211 252 0.83

4 15 8e-05 0.016 16.0 0.3 18 44 257 280 254 280 0.95

5 15 0.00072 0.14 13.0 0.6 15 44 283 309 281 309 0.90

6 15 0.016 3 8.7 1.2 16 43 312 336 310 337 0.77

7 15 5.4e-05 0.011 16.6 0.3 19 44 343 365 340 365 0.95

8 15 0.013 2.5 9.0 1.3 15 43 368 393 366 394 0.77

9 15 0.00067 0.13 13.0 0.4 19 44 400 422 397 422 0.94

10 15 0.0025 0.5 11.2 0.7 16 44 426 451 423 451 0.87

11 15 0.035 6.8 7.6 0.1 19 44 457 479 455 479 0.92

12 15 0.011 2.2 9.1 1.4 15 44 482 508 480 508 0.90

13 15 0.079 16 6.4 3.2 3 43 499 536 497 537 0.88

14 15 0.62 1.2e+02 3.6 1.6 19 43 543 564 539 565 0.86

15 15 0.00032 0.063 14.1 1.5 19 44 571 593 568 593 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	1.1	2.1e+02	2.8	1.6	16	43	170	194	156	195	0.78
2	15	6.2	1.2e+03	0.4	0.4	19	38	201	217	198	223	0.72
3	15	0.0013	0.25	12.2	1.2	6	44	217	252	211	252	0.83
4	15	8e-05	0.016	16.0	0.3	18	44	257	280	254	280	0.95
5	15	0.00072	0.14	13.0	0.6	15	44	283	309	281	309	0.90
6	15	0.016	3	8.7	1.2	16	43	312	336	310	337	0.77
7	15	5.4e-05	0.011	16.6	0.3	19	44	343	365	340	365	0.95
8	15	0.013	2.5	9.0	1.3	15	43	368	393	366	394	0.77
9	15	0.00067	0.13	13.0	0.4	19	44	400	422	397	422	0.94
10	15	0.0025	0.5	11.2	0.7	16	44	426	451	423	451	0.87
11	15	0.035	6.8	7.6	0.1	19	44	457	479	455	479	0.92
12	15	0.011	2.2	9.1	1.4	15	44	482	508	480	508	0.90
13	15	0.079	16	6.4	3.2	3	43	499	536	497	537	0.88
14	15	0.62	1.2e+02	3.6	1.6	19	43	543	564	539	565	0.86
15	15	0.00032	0.063	14.1	1.5	19	44	571	593	568	593	0.94

Sequence Information

Coding Sequence: ATGGAATCGAGTGGAACGTTGAACTGTCCTGTccgcGTGAAAGAAGAACCAATCGACGTGTTGCTCGGTGAAAATGATTACATTGTAATCGACAAGACAGCCGAtgtcaacaattttcaattcctCAGACATCAGCAAGAAAATCaaatTCATGTGCTTCAAAAATCTGACGAAAATCACGAGAGTGAACTTGACGACTTGGCGATCGAGTTGGAATGTAAAGACATGAAGCCGAGCTTGGATTTATTAGCAGttacgaaaattgaaaattggtcTGAAGATCACTTGGCGGTTATTGAAAATAGTAACGAATATCAAactcaaaatataattaaattggAAGCTTTAGATACAGTAAAAACGGAATCGTTTGTAGACGACGCAAATCAATTAAATATGAACCTAAACTGTGAACTCAGCGAgccaaagaaaagaaaaacagttGTACAAAATGTGGATTATAATCATaaactcaaaaaacacattgatATGCCGAATCGTAAAATCAGATATCCTTGTGATACATGTGGAAAGTCATTCGGACATAAGAGCACTCTCAAAGCTCACATCGACTCGGTGCATCTTAAAATCACTCATGCCTGTGACGAAtgtggaaaaatattcaaacaaaAACATTATCTTAAACTTCACATTGATGCAGTGCATAATAGTCAAAAAAGGTACGAATGTGGCGTGTGTGGCAAGAATTTCTCGCTAAAGGGTACTCTGAAAACTCATATCGATTCCGCACATAATGGTAAAACTCCCACATGCGATATCTGCGGAAAGACGTTTTCTCAAAAGAGTAATCTCCAAACCCACATCAACTCGGTTCATAATAGTCAAAAAAGTTACGAATGTGGCGTGTGTGGCAAGAAGTTCTCGCTAAAGGGTAATCTTCGCACCCACATCAACTCAGTGcataatcaaaaaagttacGAATGTGACGTGTGTGGCAAGAAGTTCTCGCGAAAGCATGTTCTGAAAACTCATACCGATTCGATGCATAAAGGCATCACCTACCCATGCAATTTTTGCGGAAAGACGTTCTCGTACAAGAGTACTCTCCAAACCCACATCAACTCAGTGCATAATAGTCAAAAAAGTTACGAATGTGACGTGTGTGGCAAGAAGTTCTCGCGAAAGCATGTTCTGAAAACTCATACCGATTCGATGCATAAAGGCATCACCTACCCATGCAATTTTTGCGGAAAGACGTTCTCGCTCAAGGGTAATCTCCAAGCCCACATCAACTCGATGCATAATAGAACAAAAAGGTACGAATGTGACGTGTGTGGCAAGAAGTTCTCGCAAAAGGGTACTCTGAAAACTCATATCGATACGATGCATAAAGGCATCACCTACCCATGCGATGTatgcggaaagacattttcCCAAAAATGGAATTTAAAAACTCACATCGATTCGATACATAATggtcgaaaaaattatgaatgtgACGAGTGTAACAAGAAGTTCTCGCGAAAGGATCATCTAAAAAGTCATATCGATTCTGCGCATAATAAAACGAAAAGTTACGAGTGTGACGTGTGTCGCAAGAAATTCTCGCTAAAGTTTAATCTTAAAATACACATTGATTCAGTGCACCATAAAATCACCTACGCTTGTGGTACATGTGGAAAAGCATTCAGATATCAGAACAGTCTTAATAATCACATCAAATCAGTGCACCATAAAATCACTCATGCCTGTGACGTATGTGGAAAGATGTTCTCTCAAACAAGTAATCTTCGCACCCATATCAACTCAGTGCATAATAGTCAAAAAATCATCTGA
Protein Sequence: MESSGTLNCPVRVKEEPIDVLLGENDYIVIDKTADVNNFQFLRHQQENQIHVLQKSDENHESELDDLAIELECKDMKPSLDLLAVTKIENWSEDHLAVIENSNEYQTQNIIKLEALDTVKTESFVDDANQLNMNLNCELSEPKKRKTVVQNVDYNHKLKKHIDMPNRKIRYPCDTCGKSFGHKSTLKAHIDSVHLKITHACDECGKIFKQKHYLKLHIDAVHNSQKRYECGVCGKNFSLKGTLKTHIDSAHNGKTPTCDICGKTFSQKSNLQTHINSVHNSQKSYECGVCGKKFSLKGNLRTHINSVHNQKSYECDVCGKKFSRKHVLKTHTDSMHKGITYPCNFCGKTFSYKSTLQTHINSVHNSQKSYECDVCGKKFSRKHVLKTHTDSMHKGITYPCNFCGKTFSLKGNLQAHINSMHNRTKRYECDVCGKKFSQKGTLKTHIDTMHKGITYPCDVCGKTFSQKWNLKTHIDSIHNGRKNYECDECNKKFSRKDHLKSHIDSAHNKTKSYECDVCRKKFSLKFNLKIHIDSVHHKITYACGTCGKAFRYQNSLNNHIKSVHHKITHACDVCGKMFSQTSNLRTHINSVHNSQKII

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01482792;
90% Identity: iTF_01482792;
80% Identity: iTF_01482792;