Basic Information

Insect: Trichogramma dendrolimi
Gene Symbol: -
Assembly: GCA_034770305.1
Location: JAPMIB010000004.1:1051638-1053266[+]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.0022 0.43 11.4 3.3 12 44 24 53 13 53 0.86

2 18 0.022 4.2 8.2 0.2 15 43 56 81 54 82 0.73

3 18 0.024 4.8 8.1 0.4 19 32 88 101 85 110 0.73

4 18 0.0056 1.1 10.1 1.7 13 43 111 138 103 139 0.79

5 18 0.99 1.9e+02 2.9 1.2 9 35 136 159 130 168 0.69

6 18 0.0003 0.06 14.2 0.7 19 44 174 196 157 196 0.92

7 18 4.5 8.8e+02 0.8 1.0 18 40 201 220 197 224 0.76

8 18 0.00019 0.036 14.8 1.3 18 44 229 252 218 252 0.90

9 18 0.0026 0.52 11.2 1.4 18 44 257 280 253 280 0.91

10 18 0.0036 0.72 10.7 0.4 15 43 283 308 281 309 0.81

11 18 0.045 8.9 7.2 1.1 9 42 306 336 300 338 0.72

12 18 0.02 3.9 8.3 0.8 19 38 344 370 341 370 0.81

13 18 7.7 1.5e+03 0.1 1.7 18 40 371 390 369 394 0.75

14 18 0.00091 0.18 12.6 1.1 18 44 399 422 388 422 0.89

15 18 0.0016 0.31 11.9 0.2 18 44 427 450 423 450 0.91

16 18 0.013 2.6 8.9 1.0 15 43 453 478 451 479 0.81

17 18 0.002 0.4 11.5 0.8 19 44 485 507 482 507 0.94

18 18 0.27 52 4.7 1.1 18 38 513 530 509 533 0.78

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.0022	0.43	11.4	3.3	12	44	24	53	13	53	0.86
2	18	0.022	4.2	8.2	0.2	15	43	56	81	54	82	0.73
3	18	0.024	4.8	8.1	0.4	19	32	88	101	85	110	0.73
4	18	0.0056	1.1	10.1	1.7	13	43	111	138	103	139	0.79
5	18	0.99	1.9e+02	2.9	1.2	9	35	136	159	130	168	0.69
6	18	0.0003	0.06	14.2	0.7	19	44	174	196	157	196	0.92
7	18	4.5	8.8e+02	0.8	1.0	18	40	201	220	197	224	0.76
8	18	0.00019	0.036	14.8	1.3	18	44	229	252	218	252	0.90
9	18	0.0026	0.52	11.2	1.4	18	44	257	280	253	280	0.91
10	18	0.0036	0.72	10.7	0.4	15	43	283	308	281	309	0.81
11	18	0.045	8.9	7.2	1.1	9	42	306	336	300	338	0.72
12	18	0.02	3.9	8.3	0.8	19	38	344	370	341	370	0.81
13	18	7.7	1.5e+03	0.1	1.7	18	40	371	390	369	394	0.75
14	18	0.00091	0.18	12.6	1.1	18	44	399	422	388	422	0.89
15	18	0.0016	0.31	11.9	0.2	18	44	427	450	423	450	0.91
16	18	0.013	2.6	8.9	1.0	15	43	453	478	451	479	0.81
17	18	0.002	0.4	11.5	0.8	19	44	485	507	482	507	0.94
18	18	0.27	52	4.7	1.1	18	38	513	530	509	533	0.78

Sequence Information

Coding Sequence: ATGCATGCGATATCTGCGGAAAGACGTTCTCTCAAAAGTTCTCTCCAAACCCACATCAACTCGGTGCATAATAGAACAAAAAGGTACGAATGTGGCGTGTGTGGCAAGAAGTTCTCGCTAAAGGGTAATCTTCGCACCCACATCAACTCAGTGCATAATAGTCAAAAAAGTTACGAATGTGACGTGTGTGGCAAGAAGTTCTCGCGAAAGGATGTTCTGAAAGCTCATACCGATTCGATGCATAAAGGTATCACCTACCCATGCAATTTTTGCGGAAAGACGTTCTCGCTCAAGGGTAATATCCAAATCCACATCAACTCGGTGCATAATAGAACAAAAAGGTACGAATGTGACGTATGTGGCAAGAAGTTCTCGCGAAAGGGTACTCTGAAAATTCATAtcgattcagtgcataatAGAACAAAAAGGTACGAATGTGACGTGTGTGGCAAGAAGTTCTGGGGAAAGGATGTTCTGAAAGCTCATACCGATTCGATGCATAAAGGTATCACCTACCCATGCAATTTTTGCGGAAAAACATTTTCCCAAGAAAGGAATTTGAAATCTCATATCGATTCGACTCATAACAATATCAGACATGAATGTGATACATGTGAAAAGTCATTCTCACATAAAAGTTACCTCAAAATACATATTGAAGCGATACATAATGGTAAAACTCCCACATGTGATATCTGCGGAAAGAAGTTCTCTAAAAAGAGCAATCttaaaatccacatcgattccGCACATAATGGTAAAACATATGCATGCCATATCTGCGGAAAGACGTTCTCTCAAAAGGGTAATCTCCAAACCCACATCAACTCGGTTCATAATAGTCAAAAAAGTTACGAATGTGACGTGTGTGGCAAGAAGTTCTCGCGAAAGGGTACTCTGAAAATTCATAtcgattcagtgcataatAGAACAAAAAGGTACGAATGTGACGTGTGTGGCAAGAAGTTCTCGGGAAAGGATGTTCTGAAAGCTCATACCGATTCGATGCATAAAGGTATCACCTACCCATGCGATTTTtgcggaaagacattttcCCAAAAAGGTAATTGGAAATCTCATATCGATTCGACTCATAACAATATCAGACATGAATGTGATACATGTGAAAAGTCATTCTCACATAAAAGTTACCTCAAAATACATATTGAAGCGATACATAATGGTAAAACTCCCACATGTGATATCTGCGGAAAGAAGTTCTCTAAAAAGAGCACTCttaaaatccacatcgattccGCACATAATGGTAAAACATATGCATGCGATATCTGCGGAAAGACGTTCTCTCAAAAGGGTAATCTCCAAACCCACATCAACTCGGTTCATAATAGTCAAAAAAGTTACGAATGTGACGTGTGTGGCAAGAAGTTCTCGCGAAAGCATGTTCTGAAAGCTCATACCGATTCGATGCATAAAGGCATCACCTACCCATGCGATTTTTGCGGAAAGACGTTCTCGTACAAGTGTAATCTCCAAACCCACATCAACTCGGTGCATAATGGTGAAAAACCTTACAAATGTGACACGTGCGGTAAGAAATTCTCGCAAAAAGTTAATCTTAAAAGTCACAACCAATGCGATGCGTGTTTGTGTCACACCTACTCGTGA
Protein Sequence: MHAISAERRSLKSSLQTHINSVHNRTKRYECGVCGKKFSLKGNLRTHINSVHNSQKSYECDVCGKKFSRKDVLKAHTDSMHKGITYPCNFCGKTFSLKGNIQIHINSVHNRTKRYECDVCGKKFSRKGTLKIHIDSVHNRTKRYECDVCGKKFWGKDVLKAHTDSMHKGITYPCNFCGKTFSQERNLKSHIDSTHNNIRHECDTCEKSFSHKSYLKIHIEAIHNGKTPTCDICGKKFSKKSNLKIHIDSAHNGKTYACHICGKTFSQKGNLQTHINSVHNSQKSYECDVCGKKFSRKGTLKIHIDSVHNRTKRYECDVCGKKFSGKDVLKAHTDSMHKGITYPCDFCGKTFSQKGNWKSHIDSTHNNIRHECDTCEKSFSHKSYLKIHIEAIHNGKTPTCDICGKKFSKKSTLKIHIDSAHNGKTYACDICGKTFSQKGNLQTHINSVHNSQKSYECDVCGKKFSRKHVLKAHTDSMHKGITYPCDFCGKTFSYKCNLQTHINSVHNGEKPYKCDTCGKKFSQKVNLKSHNQCDACLCHTYS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01482786;
90% Identity: iTF_01482786;
80% Identity: iTF_01482786;