Tden027442.1
Basic Information
- Insect
- Trichogramma dendrolimi
- Gene Symbol
- SNAPC4_1
- Assembly
- GCA_034770305.1
- Location
- JAPMIB010000268.1:44524-47202[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.0062 11 7.0 0.0 13 43 220 255 212 258 0.80 2 4 6.4e-12 1.1e-08 35.8 0.5 1 44 264 309 264 311 0.96 3 4 9.1e-08 0.00016 22.5 0.1 4 44 321 365 318 367 0.96 4 4 2.3e-09 4e-06 27.6 0.0 1 30 373 402 373 404 0.94
Sequence Information
- Coding Sequence
- ATGATCAAACCTGAAGATAGTCAAAGTTTATTAGATGAAATTCAAGCATTGGAAGATGCCTTGGTTGCTCAAGGAGGTTCAAGTCCTGAATGCaatcaaaaaacttttcatcaGTTTCataaacatgaaaatgaagaCATAATGGATAttgatttatatgaaaatgaaagtgATTACATGGATGTTGATTCAGTTGCAAAAGGCAACGATGAATACCAGTTTGATCGTAACTGCAATAATTTACAAGACTTATTAGAAATGAATAAGGTTTTATTCGAATCAATATCTACTGCCCGTCAAAAGATGACTAAAATGCTTGTTGATTGTCAGAATAAATTACATGCAATTGAAGGGCAAATAGCAAACCAACAAACTAATGTTTatcacaataaaattatatgttttAATGCTGGTATGCCATATTTTAAGgatcgaaattattttcatcctCAAAGAAATGAAGATaccgaaagaaaaataaaaaatggtgAATTAAGACTCGGTAAACTTCAAAGAATACACAAATGGAATCCTGCTGATAAAAGTATTTTGTTGCAATCGATAAAACATGAAGTGAATCTCAAAATATCTAAAAAGcaagaaatagaaaatatgaATGGTGCAATTACTAAAACTAGTCAATTACCCAAAGATGTTAAACAAGCTATTGGATCTTTGGGaaatatgaaatttgattGGTTGAAAATATGTAATATGATGCCAGAAAGTAAGCATAATGCTGAAGAATGTAAAGTTATGTGGAATGTGTTTTTACATCCAGATATTAATAAACAAAGATGGACAGCACAAGAAGATAAAAATCTTAATAGAATagttgatgaaaatgaaaatgaagactGGGATAGAATTGCAAGAAATTTAAATACTGGTAGAAGTGGTTATCAATGTTTTGTTCGTTACAATACaaataattggaaaaatttgatgaaaggTGTGCTATGGTCAGCCAGAGATGATACTATATTACTAAAATTAGTTGAGAAACTGAAAATGGGAGATTACATTCCTTGGGGATACATTGCAAGCTGTATGAACAATTGGACTAAACAGCAGgtaTATTTTAGATGGAATTATAGTTTAGCACCTTACCTTAAAAAAGGGAGGTACACTGCAGAAGAAGACAAATTACTTTTAAGTGCAGTGAAcaaatatggaaaaaattttacacaaatatcTGCTTTGATAGAATTACCAATGGAAATAgaagatgataaaaatatatctgaaTTCCTTGCAGAAGATATTATtcagtttgaaaaattcaaaaatatggTTACTCCTAaaacaaatgaatttaaaGAATTGAAGAGCTGGTCTCCTGAACaatctttgcaaaaattaGCGCAATTTaaaaattttgaaacaaattcAGAAACTATAATGAAATACAGTTGGAAACAACACAAAATGGTACCTATCACAGAATGTGAAGATCCTCATGAAGTGTTTGTGACTGAGAAAGAACCTCTTAAACTCATAAGGCCCAACAGAACTGCACTTCAAGCATATCAAGAACTATTAGTGTCTTCGGAAAATTTTCCAACTGAAATGAGTTTGAATCATCCAAACCATAAATTAACATCTAATGGTCGTAATGCTTTGATACTGTTAAAAAAACGTTATCAACAATTATTTGGTATCCCTATTGGTTTATCAAGAATTTTACCCCCAGACATCATAGATGAAAGTGCATTTTTACCAATTATTgagaaatttaagaaaaaaaatgtaaaaaaaaagtgttctAAGTTGTAA
- Protein Sequence
- MIKPEDSQSLLDEIQALEDALVAQGGSSPECNQKTFHQFHKHENEDIMDIDLYENESDYMDVDSVAKGNDEYQFDRNCNNLQDLLEMNKVLFESISTARQKMTKMLVDCQNKLHAIEGQIANQQTNVYHNKIICFNAGMPYFKDRNYFHPQRNEDTERKIKNGELRLGKLQRIHKWNPADKSILLQSIKHEVNLKISKKQEIENMNGAITKTSQLPKDVKQAIGSLGNMKFDWLKICNMMPESKHNAEECKVMWNVFLHPDINKQRWTAQEDKNLNRIVDENENEDWDRIARNLNTGRSGYQCFVRYNTNNWKNLMKGVLWSARDDTILLKLVEKLKMGDYIPWGYIASCMNNWTKQQVYFRWNYSLAPYLKKGRYTAEEDKLLLSAVNKYGKNFTQISALIELPMEIEDDKNISEFLAEDIIQFEKFKNMVTPKTNEFKELKSWSPEQSLQKLAQFKNFETNSETIMKYSWKQHKMVPITECEDPHEVFVTEKEPLKLIRPNRTALQAYQELLVSSENFPTEMSLNHPNHKLTSNGRNALILLKKRYQQLFGIPIGLSRILPPDIIDESAFLPIIEKFKKKNVKKKCSKL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -