Tden006743.1
Basic Information
- Insect
- Trichogramma dendrolimi
- Gene Symbol
- lov
- Assembly
- GCA_034770305.1
- Location
- JAPMIB010000017.1:828452-832568[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.4 4.9e+03 -1.9 0.1 2 10 226 234 225 235 0.89 2 2 9.4e-16 1.1e-12 48.3 0.1 1 44 526 569 526 570 0.95
Sequence Information
- Coding Sequence
- ATGTCAAGTCGAACTGGCAGTACGGTCGAATCAACCTCGGGCTATTCCTTGAGGTGGCATAACCACCAACTCCACATAACAAAAGCATTCGGAGCATTACTGCATGCGGATAATGACACTCTGGTCGACGTCACACTTGTATGCGCGAACGGGAGCCTTGGAGCCCACAAAATTATTCTGAGTGCTTGCAGcCCTTTCTTCGCGAAGATATTCGAGAATCACCCATGTAAACATCCGGTGATCGTTCTCGATGACTTCTCCGTCAATGAGATCAACATTATAATGGAATTTATGTACCTAGGCGAAGTGAGAATAGAACATTCCGATTTGCCTGGGGTCTTACAAGCAGCGAGCAGTTTGCAAATTCGAGGATTAACCTCGTCGGAGGTACAGCTGACGCGAAACACATCGAGTCCCATCTCAGCGGATTCGCTGGCCGACGAGCCGCTGACGCCCGAGGAGGAGGCGGCTCATCAACAGTTGCTGGCCGACGACGGAGACGACGAGGAGTTGCCGACTCCCGAGTCCGACAGGGAGCTCATCCACAGGGGACAGGACTGCAGTCGAGACACGAGCGCGTCACCACTGATGGCGAGAAGGAAGCAGGCGCGACCGCGCAGAAGGTCGGACGACCAGCCGCAAGACCTCAGTCGGACCAAGAGCAGCGAGCGCCTCGAGGACGACTTGGACGCGGCGATCCAAAATCGAAAGTCGCCCTCCAACGGATTCGTCGTAGATTCGTCGATTCGGAGGCCGAGCTCGCCGCGCGTGAACAGCAGTACCGATGCCGAGACGATCAGCGAGAAGCAGGCATCGGCGCACGATAAACAGCAGCACACGAccgatcagcagcagcaacagcaactaCAGCAGCAACAAGAGGAGGAGGCGGAAAATCTCTCCATGAAAAAGGAGCTGAATCAAATCTTCTCTCCGACCTTGTCGATCGATCTGCTGAAAACCGAGAGCGAAACGACCAACAGCCCGCGAACTTCGCCGCTGATGGGCAACCACACGTTCAGCCCCAACGGGCCGTACATGAACATGCCCGTGCCCGGCATGGCGGCGATGTCGAGCTTGGCGCTGACGCCTCCGCACCATCCGAACAACGAGTACCTCTCGAGTCTGAGTCAACTCGCGGCGCAGTGGCTGCCACCGAATCAGCACAACCACATGAGCGGAGGCGGCGTCGCCACGCCGAGACTGCCGCGACCCGACGAGGTCAAGCCACCGGCTGGCTTCCCCTTCGCTCCGTGCGGCTCGCCCATCGGGCATCGATCGTTCTTGGCTGGCCAGGAGCCCGCGATGAACGGCCTGTTTCACGGCTTGCCGATGGAGGGCTACCAGGACGGCTTCAAGCCCGAGACGTTCCACGGCCTGTTCGCGGCGAGTCTGGGCGTGCCTCCGCCTCCCGCACCTCCGCgcaaaaagtcgaaaaagcAGAGATCGTCGGAGGCCGGCGGTGGCGGAGGCGGCTCGGCGGGTCGACGCTGGTGCAGTCAGCAGCAAGTGCGCCCGCTCAACAAGCCCAAGGGCCAGCACAGCGCACCCCGAGGCGGACCCCCGCGATCCTGGACCAACAACGAGCTCACCGAGGCCCTCAGCGCCGTCTGGAGGAAAACCATGACGACGTCGCAGGCCTCGCGGACCTACGGCATACCCTACAACAGTCTGCTCATGTACGTGAGGGGCAAGTACGGCAAGAGTCTCAAACTCGAGCAGCTCCGACACGACTGCTCGACGAGGGAGCTCGTGCTGgcgcacaacaacaacaccaaAAGTATGCAAGCCCCCGGCCcgagcaagcagcagcagcaacagcagcagcagcagagcctcGGGGGTCCGGGCGGCGTGACGGACGccgaggcggcggcggcctaCTCGCACCACGCCAACATGCCACTGCTGAGCGGTGGGGTCAGTCAGGGCTTCTACCCGGATTTCGCCAATTTTTCCCTGGCCGTAAACATGGCCCAGATGCTGCAGTCCGAGGTGGGCGGAGGACAgtcgagcggcggcggcggcggtggcgcggCGAATGGCGAACGACGGATGGGTGGCGGACCGGTAGCGCTGCCACCGGGCGCCAGCCGCAGCCCCTCGCCAGCGCCCGAGCCCGAGCAACTGACCGCTGTTGAAACAGAAATGAAGCTCTTTAAAGTCAGCGTCGTTGGCCAAAGGCTATTAGAGACTGAAATCGCATTTTAG
- Protein Sequence
- MSSRTGSTVESTSGYSLRWHNHQLHITKAFGALLHADNDTLVDVTLVCANGSLGAHKIILSACSPFFAKIFENHPCKHPVIVLDDFSVNEINIIMEFMYLGEVRIEHSDLPGVLQAASSLQIRGLTSSEVQLTRNTSSPISADSLADEPLTPEEEAAHQQLLADDGDDEELPTPESDRELIHRGQDCSRDTSASPLMARRKQARPRRRSDDQPQDLSRTKSSERLEDDLDAAIQNRKSPSNGFVVDSSIRRPSSPRVNSSTDAETISEKQASAHDKQQHTTDQQQQQQLQQQQEEEAENLSMKKELNQIFSPTLSIDLLKTESETTNSPRTSPLMGNHTFSPNGPYMNMPVPGMAAMSSLALTPPHHPNNEYLSSLSQLAAQWLPPNQHNHMSGGGVATPRLPRPDEVKPPAGFPFAPCGSPIGHRSFLAGQEPAMNGLFHGLPMEGYQDGFKPETFHGLFAASLGVPPPPAPPRKKSKKQRSSEAGGGGGGSAGRRWCSQQQVRPLNKPKGQHSAPRGGPPRSWTNNELTEALSAVWRKTMTTSQASRTYGIPYNSLLMYVRGKYGKSLKLEQLRHDCSTRELVLAHNNNTKSMQAPGPSKQQQQQQQQQSLGGPGGVTDAEAAAAYSHHANMPLLSGGVSQGFYPDFANFSLAVNMAQMLQSEVGGGQSSGGGGGGAANGERRMGGGPVALPPGASRSPSPAPEPEQLTAVETEMKLFKVSVVGQRLLETEIAF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01482588;
- 90% Identity
- iTF_01483999;
- 80% Identity
- iTF_01482588;