Tden025508.1
Basic Information
- Insect
- Trichogramma dendrolimi
- Gene Symbol
- -
- Assembly
- GCA_034770305.1
- Location
- JAPMIB010000181.1:235286-241276[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 2.2e-12 2.5e-09 37.5 0.0 1 39 430 469 430 473 0.90 2 4 6.8e-12 7.6e-09 35.9 0.1 2 39 485 522 484 525 0.94 3 4 2.5e-18 2.8e-15 56.5 0.0 2 45 540 584 539 584 0.97 4 4 3e-17 3.4e-14 53.0 0.0 1 42 591 633 591 634 0.97
Sequence Information
- Coding Sequence
- TCGCTGCTGAGAACGGCGGATCAATTGAAAATCAAGGGCCTGTGCGAGGTGTCGGCGGAGACCGGAGGCGGCGACGTAATCGGCCCGTCGGCGGTCAGTCTCAGCACGCCACCGGCCGACTATCTTCCCCATCATCGAgcccatcatcatcatcatcatcgggCCTCGTCGCCGTATCGTCATCGCTCTTCGGGAGGCAGGCGCGAAGGGTCCGCCGCCGGTGGTGGTAGCCTGTCCACGCCGCGCCTGAACTGGACCAAGTTCGGCAAGCATCAGCGCACCTCGCCGTCCTACAAGCGATCTTCGTCGACGCGCAAATCCTCCGCCGCATCGCAGGCCGCAGCCTCGTCGTCCTTTCTGCAGCCCCAGCCGGCCCACGAGGCGACGAGTCGCGCCGCGGCTCGCCACCCCAGACACATCGCCTACAATTACTATCATCACAGTCAGTTGGACACCAAGGCCAAGTacaaggaggaggaggacgacgaagacgacgaagagGTCTACGCGCGACTCTGCGCCAAAGAGAATCGACAGGACTGCTGGTCAGGCAACGACGAGGATGACGAGTGCATGGACACGACCGGCCGAGCTAACGTGCCCGCCGCAGCGAGTACACCACTAGTCGTGCTCGACTCCAGCCCGTCcatcatcaacaacaacaacaacaacatcaacaagagcaacaacaacaacaacgagaaaaaattaacgacgACCAACGGGGCCGCAGCCGGCGCCGCCGATCGCCCAGACGACAGCAACcgaaggagcagcagcaacagcagcagcagcggcggcagcagcagcggtgccagTCCCAGCAGCGCCAACAATAACGCAGCCACCAAAACGAGCAACAACGGTGACATGTTTTGTCACACGGGCCTCGGCCACTATGGCCACCACACGGATCCGGGCGAGGTCGACCTGCCGCCCGAGACTCAGCCCACGCCACCGAGCGCGACCCTCGTCGGCACGACCACGACGCACCTGCGGGATCCCGACAACCACACGACAGATATCCAGAACTGCGACAACGACGTGAAGGTCAAGTTCGAGACCCTGCAGACGATGGACTCGTCGGACACGATCGACATCGACAGCCACATGTCCGACCGGGCGAGCGTCAGCTCCAAGGCCGACGACAACATGATGATGATCACGCCGGAACTGCTGGGCCTGATGCCCTCCGGCAGCTCGATACACTCGGACTCGCCCGGCGGCGAGAACAACTCGCGAAATCACTCGCAGTCCGGCTCGCATCATCACGGATCCAAGTCCTGGACGCAGGAGGACATGGACGCCGCGCTCGAGGCTCTCCGAAATCACGACATGAGCCTCACCAAAGCTTCTGCCACCTTTGGGATTCCATCGACGACGCTGTGGCAGCGGGCCCACAGGCTCGGTATCGACACGCCAAAAAAAGACGGACCGACCAAGTCGTGGAGCGACGAGAGCCTCAACAACGCCCTTGAAGCTCTGCGCACGGGCACGATATCGGCCAATAAAGCCTCTAAAGCCTTCGGCATACCTTCGAGTACTCTGTACAAAATAGCCAGGCGAGAAGGCATAAGATTGGCCGCGCCCTTTAACGCGAGTCCCACGGCTTGGTCCCCGGCTGATTTGGACAGAGCACTCGAGGCAATCCGATCCGGCCAGACCTCCGTGCAACGAGCTTCCACCGAGTTTGGCATACCTACGGGTACGCTTTACGGGCGTTGCAAGAGGGAGGGTATTGAGTTGAGCAGGAGCAATCCTACGCCCTGGAGCGAGGACGCTATGACCGACGCCTTGGAGGCCGTGAGATTGGGGCACATGAGCATCAATCAAGCGGCGATACACTACAATCTACCCTACTCATCGCTCTACGGGCGCTTCAAGCGCGGCAAGTACGAGGAGCCGGTCATGTCGCAGAACGAGATGTCCCAGGACGGATCGTCGCAGCACTTTCATCATCCGAGCCCGACGCAGAACAATCACACGTCGCCGCTGCCCGAGCAGATGACCTACCAGGGCAGCTGA
- Protein Sequence
- SLLRTADQLKIKGLCEVSAETGGGDVIGPSAVSLSTPPADYLPHHRAHHHHHHRASSPYRHRSSGGRREGSAAGGGSLSTPRLNWTKFGKHQRTSPSYKRSSSTRKSSAASQAAASSSFLQPQPAHEATSRAAARHPRHIAYNYYHHSQLDTKAKYKEEEDDEDDEEVYARLCAKENRQDCWSGNDEDDECMDTTGRANVPAAASTPLVVLDSSPSIINNNNNNINKSNNNNNEKKLTTTNGAAAGAADRPDDSNRRSSSNSSSSGGSSSGASPSSANNNAATKTSNNGDMFCHTGLGHYGHHTDPGEVDLPPETQPTPPSATLVGTTTTHLRDPDNHTTDIQNCDNDVKVKFETLQTMDSSDTIDIDSHMSDRASVSSKADDNMMMITPELLGLMPSGSSIHSDSPGGENNSRNHSQSGSHHHGSKSWTQEDMDAALEALRNHDMSLTKASATFGIPSTTLWQRAHRLGIDTPKKDGPTKSWSDESLNNALEALRTGTISANKASKAFGIPSSTLYKIARREGIRLAAPFNASPTAWSPADLDRALEAIRSGQTSVQRASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMTDALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGKYEEPVMSQNEMSQDGSSQHFHHPSPTQNNHTSPLPEQMTYQGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01483988;
- 90% Identity
- iTF_01484797;
- 80% Identity
- -