Basic Information

Gene Symbol
KDM5A
Assembly
GCA_034770305.1
Location
JAPMIB010000056.1:784947-796203[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.4e-25 8.3e-22 78.2 0.0 2 89 192 275 191 275 0.94

Sequence Information

Coding Sequence
ATGGTTGCGAAGCCGAGCGCCAAGGGTCAGCGCTCGCCCGAGAGCAAGAGCAGCGGGCCGaccatgacgacgacgaccacgaccagtgaaaataataacaatcagCGACCCAACAGGAGCGCTGCCGTGGCCGCGGCGGCCGCGATGGCCCAGATACAGGAGTCGGCCGCCGATGACGTCGTTACCGGATGGACGCCATCATCGGGCAAAGCCGCCAATGCGATGAACAGTTCCACCTCGTCGTTatctgcgacgacgacgacgacggcggcggcggcggcggctacggGTACGACGACacctgcaacagcagcagcagcgggacCTACGCCGCGTGTTCAGGATTTCGAGTTCAAGCCACCGCCCGAGGCACCAGTCTTCGAGCCCACCGCCGAGGAGTTCAAAGATCCTCTGGCCTACATCGCCAAGATAAGGCCCATCGCCGAGAAAGCGGGCATTTGCAAAATCAAGCCGCCTGCTgcTTGGAGGCCACCCTTCGCCGTGGACGTCGACAAGTTCAAATTCGTACCAAGAATACAGAGACTCAACGAGCTCGAGGCGAAGACTCGCATCAAGCTCAACTTTCTTGACCAGATAGCAAAGTTTTGGGAGCTACAGGGTTCATCTTTGAAGATTCCCCTGGTTGAGCGTAAGGCTCTTGATTTGTATTCACTTCATCGTATTGTCACAGATGAAGGTGGTATCGAAACAGTGACAAAAGAGAGACGATGGGCTAAAATAGCTAACAAAATGGGCTATCCATCTGGAAGGAGTGTAGGCAGTATTCTTAAAAATCACTATGAAAGAATTTTATATCCATTTGACGTATTTAAACAGGGAAAAATTTTAGCAAATCTTAAAACTGATCCTGACACCgatgttaatgaaaaaaatgatagagATTATAAACCTCATGGCATAATTTCCCGCCAACAAATCAAACCTCCTCAAGAGAAGTTTTCCAGACGGTCTAAAAGATTTTCTGGACAAGATGACAAACAAAATGGTTGTTCATCTCCCATAAAACAGGAAGACTGCAAAGAAGAATATGATATGGACTGTAAAGATAATGTTATGGATGTAGATACTAAAGACAATATTCAAGTAACAGAATCTAAAACCAAAGGCAAAAATGGTTCAGAATCTAAAATAACCCTGAGAACAAGAGGctcaaaaacagaaaaagataataaagaAAACAGCAAGGAATTGAAGAAACTACAATGTTACGGAGCTGGTCCCAAATACCCTGGCATACCAAATACCAAAGAATCTAAGAAAGCTTCAAACAAAACAAGGGGAATCAAGATGACATATGAATTTGATCCTCTTGCAAAATACATCTGCCATAACTGTGGTAAAGGTGATAACGAAGAAAATATGCTATTATGTGATGGCTGTGATGACAGCTATCATACTTTCTGCTTACTTCCTCCATTATCAGAAATACCAAAAGGGGATTGGAGATGTCCAAAATGTGTGGCTGAAGAAGTTTCAAAACCTATGGAAGCTTTTGGCTTTGAACAAGCTCAAAGAGAATACACATTGCAACAATTTGGAGAAATGGCAGATCAATTCAAAAGTGATTACTTTAATATGCCAGTTCATatggTTCCTCCAGATTTAGTTGAGAAGGAATTTTGGCGAATAGTTTCCTCTATTGATGAAGACGTAACTGTTGAATATGGGGCTGATTTACATACAATGGATCATGGCTCAGGATTTCCAACTCAAACAAGTGTTAATTTGTTTACTTGTGATCAAGAATATGCTGAATCAGCTTGGAACCTAAATAATTTACCTGTACTACCAGAGAGTGTACTTGGCCATATTAATGCTGACATAAGTGGAATGAAAGTCCCATGGATGTATGTGGGCATGTGCTTTGCTACATTCTGTTGGCACAATGAAGATCACTGGAGTTACTCAATTAACTATTTACATTGGGGTGAACCAAAAACATGGTACGGTGTGCCCGGTACAGAAGCTGAAAAGTTTGAACACTCCATGAAATCAGCAGCTCCAGAACTCTTCCACAGTCAACCAGATCTCTTGCATCAGTTAGTCACTATCATGAATCCCAGTATTTTAATGAgtgaagGTGTACCAGTATTTAGAACTGATCAGCACGCTGGTGAGTTTGTCGTTACTTTCCCTAGAGCCTATCATGCAGGTTTCAATCAAGGCTACAATTTCGCCGAAGCCGTGAATTTCGCTCCTGCCGACTGGATCGAAATCGGCCGTGAGTGCATAGCCCACTACTCAAATCTGCGAAGATTCTGTGTATTTTCTCACGACGAACTCGTGTGCAAAATGTCATTAGAACCGGAGAATCTGGATATAGGCATCGCCACTGCTACTTATCACGATATGCTTCGCATGGTACAAGACGAAAAGAAGCTCAGAAAGAACCTGTTAGAATGGGGAGTAACTGAGGCACGACGTGAATCCTTCGAGTTGTTACCCGATGATGAGCGACAATGCGAGGCATGCAAGACTACATGCTTCCTTAGCGCGGTTACCTGCGAGTGTCAGCCAACGCAACTAGTTTGTCTCAAGCATTTTGCCGATCTGTGCGAATGTCCTCCTGATAAGCATACATTGAGATACAGATACACATTAGACGAACTTCCAAACATGTTGCAAAAACTCAAGCTGAAGGCCGAATCCTTCGATTCATGGGCTTCAAGGGTCAAAGAGGCTATGGATCCGAAAGGTGAAAAAGTAGAATTGACGGAGTTGAAAGAGCTTCAGGAAGAGGCTATCCACAAGAAATTTCCCGAAAGTGAGCTTTTGACTGCCTTAACAACTGCTGTCCAAGATGCTGAAAAATGTGCTAGCGTGGCCAGGCAGTTGCTGAACAGTAAGCAGCGCACCAGGACTAGACAATCTGCTGATTCAAAATATAAGTTAACTGTCGAAGAACTAAcacaattttataatgaaatttctaATCTTTCCTGCGAGCTTAAAGAAGCTGAAGgagttaaatttattatcgatCAAGTTGATCAATTCCAAAGAGATGCAGAGGAATTAGAAGAACTTGATAATGATTGTGATATAGAAAGACTAGAAAAATGCATCGATTATGGTGATGCCATTTGCATTGAATTACCGCAGCTCACGCATCTTAAacagAAACTTCAACAATTACAATGGCTAGAAGAAGTTAAAGGTGTATTCGAAGATCCAAAATCAATTACAAGGCAAGAACTTGGTAAACTTATAGAAGATGGTATGAACATCCCTCCTCACAGTACTGTCGAAAGTTCTTTAGCCAAACTTCAGTCACTCATGATTGCCATTGATAATTGGGAAGATAAAGCCAAACTTTATCTGCAACCAGTGGAAAGTAGACAAACGATTGCTGCATATGAAGATTTAATACGCGAGGCTGATCGTATTGATGCCTTTTTACCAGATTTAAGTAATCTCAAAGAAATGGTGAATAAAGCTAAAAATTGGTGCAAACTTGTTGATGAAATACAGAGAAGAGATCAATTGCCTTACTATGATACTCTAGATGAACTTGTTCGTAAAGGTCGATCTATCCCATTGCATTTACCAGCTTTACCAATGCTTGAAACGTCAATAGATCAAGCTGAATCATGGAAAGAGAAAACCGCCAAAACCTTCCTCAGAAAAAGTACTCCTTATTCACTAATGGAGGTTCTATCACCAAGAATTGGTGTAGGTCTTCATTCAGTAAAGTCTCGTAAGAATAACAAAGGCGAAGATGCAATTGGAGCTGTATATATTTGTGATACCAAACTAGATGATTCAAATGACTCTGCCGCTGTTGTTGGAGCATTTAAACTAGCAGAGCAACGCGAGATGGAGGCAATGAAAAATCTACGCGAaagaaatgttgaaaaaatgaaaatagagGATGCTAAGTTTTGTGTATGTCGCAAGCCTAAATTTGGAAATATGATAAGATGTGAATTATGTAAAGATTGGTTCCATtCCGCAACTTGTGTTACTGTTCCACGTGCACCCCAAGCAGGAAATCCCTGTCCCAAATTTTTATGCCCTTGTTGTTTAAGATCACGCCGGCCACGTTTAGAAAATATTCTAGCTCTACTGGTAATTCTACAGAAGATTCCTGTTAGAGTCCCTGAAGGTGAAGCTTTACAATGTCTAACAGAACGTGCCATGAACTGGCAGgATCGAGCTCGTAAAGCTCTAGCGGCCGAAGATGTAGCCGccattacaaataaattacatGCTGAAATGAAacaagcagaagcagcagcagccaaacCAACTattgacacgaaaaaaagtacTCCAAATCCTGGACTAAATTCCAGAAAACAAACAGTCAGTGGCGCACAATCAGATGATAGTGTTAGCGTTCCTgaagatgatgatgaagataaaatggatgaagatgaagatatGGACGACAGTGACGATGATGTTCTTACAATTGATGAAGATGAGCCCTCCAATTCCGGCTTTAACAGTAATGAACATGCGTATTCATCtgtatccaaattttcttCTAAATCCTCTGGAGAAGATGTGATAACTTTGTCTAGTAATACTTTACAACGCTTAGAAGAATTAATGATGGAAGGTGATTTGTTGGAAGTTGAACTGGAGGAGACGAATTATATGTGGGCCATCGTTCGACGAACGAATATATCAATAAAGGGCATCCGCAGTTATGCACCTTTAAATCGAAGCAATGATGCTTTAGGAAATAAAAAGCCACCTCAGCAAAGAGGTCGCAAAAGAAAATCTGACGAAGTTGAAATATCAAAGAAATTCGGACGCCGAAGCGTGGAGGAGAAATCTGTAGCAAAACGCAAAGGTTCAAAAGAAACCAAATCAGCTCCAGTTACCATGAGGCGTGGACCACGCAagaTTAAACGAGAAGAAGATAAAGCACCCAAACGAAGAGTAGGTAAcagaaagaaaacaaaacaagACACTTCcgatgaagaagaagactGTGCTGCTGATAAATGTCTAAGGCCAAACGgtCGAGAAGTTGATTGGGTCCAATGTGATGGAGGTTGTGATGGGTGGTTCCACATGTATTGTGTAGGATTAGATCGTACAGAATTGGCTGAAGATCAAGATTACCATTGTGTTAGTTGCCGCGATCCAGACTCGGAGAGAATGGAAAAAGACGATAAGTGA
Protein Sequence
MVAKPSAKGQRSPESKSSGPTMTTTTTTSENNNNQRPNRSAAVAAAAAMAQIQESAADDVVTGWTPSSGKAANAMNSSTSSLSATTTTTAAAAAATGTTTPATAAAAGPTPRVQDFEFKPPPEAPVFEPTAEEFKDPLAYIAKIRPIAEKAGICKIKPPAAWRPPFAVDVDKFKFVPRIQRLNELEAKTRIKLNFLDQIAKFWELQGSSLKIPLVERKALDLYSLHRIVTDEGGIETVTKERRWAKIANKMGYPSGRSVGSILKNHYERILYPFDVFKQGKILANLKTDPDTDVNEKNDRDYKPHGIISRQQIKPPQEKFSRRSKRFSGQDDKQNGCSSPIKQEDCKEEYDMDCKDNVMDVDTKDNIQVTESKTKGKNGSESKITLRTRGSKTEKDNKENSKELKKLQCYGAGPKYPGIPNTKESKKASNKTRGIKMTYEFDPLAKYICHNCGKGDNEENMLLCDGCDDSYHTFCLLPPLSEIPKGDWRCPKCVAEEVSKPMEAFGFEQAQREYTLQQFGEMADQFKSDYFNMPVHMVPPDLVEKEFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTQTSVNLFTCDQEYAESAWNLNNLPVLPESVLGHINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGTEAEKFEHSMKSAAPELFHSQPDLLHQLVTIMNPSILMSEGVPVFRTDQHAGEFVVTFPRAYHAGFNQGYNFAEAVNFAPADWIEIGRECIAHYSNLRRFCVFSHDELVCKMSLEPENLDIGIATATYHDMLRMVQDEKKLRKNLLEWGVTEARRESFELLPDDERQCEACKTTCFLSAVTCECQPTQLVCLKHFADLCECPPDKHTLRYRYTLDELPNMLQKLKLKAESFDSWASRVKEAMDPKGEKVELTELKELQEEAIHKKFPESELLTALTTAVQDAEKCASVARQLLNSKQRTRTRQSADSKYKLTVEELTQFYNEISNLSCELKEAEGVKFIIDQVDQFQRDAEELEELDNDCDIERLEKCIDYGDAICIELPQLTHLKQKLQQLQWLEEVKGVFEDPKSITRQELGKLIEDGMNIPPHSTVESSLAKLQSLMIAIDNWEDKAKLYLQPVESRQTIAAYEDLIREADRIDAFLPDLSNLKEMVNKAKNWCKLVDEIQRRDQLPYYDTLDELVRKGRSIPLHLPALPMLETSIDQAESWKEKTAKTFLRKSTPYSLMEVLSPRIGVGLHSVKSRKNNKGEDAIGAVYICDTKLDDSNDSAAVVGAFKLAEQREMEAMKNLRERNVEKMKIEDAKFCVCRKPKFGNMIRCELCKDWFHSATCVTVPRAPQAGNPCPKFLCPCCLRSRRPRLENILALLVILQKIPVRVPEGEALQCLTERAMNWQDRARKALAAEDVAAITNKLHAEMKQAEAAAAKPTIDTKKSTPNPGLNSRKQTVSGAQSDDSVSVPEDDDEDKMDEDEDMDDSDDDVLTIDEDEPSNSGFNSNEHAYSSVSKFSSKSSGEDVITLSSNTLQRLEELMMEGDLLEVELEETNYMWAIVRRTNISIKGIRSYAPLNRSNDALGNKKPPQQRGRKRKSDEVEISKKFGRRSVEEKSVAKRKGSKETKSAPVTMRRGPRKIKREEDKAPKRRVGNRKKTKQDTSDEEEDCAADKCLRPNGREVDWVQCDGGCDGWFHMYCVGLDRTELAEDQDYHCVSCRDPDSERMEKDDK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01484425;
80% Identity
-