Tden015662.1
Basic Information
- Insect
- Trichogramma dendrolimi
- Gene Symbol
- retn
- Assembly
- GCA_034770305.1
- Location
- JAPMIB010000068.1:553135-570357[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.6e-26 1.2e-22 80.8 0.1 2 89 15 100 14 100 0.96 2 2 4.3 1.5e+04 -2.8 0.1 57 65 187 195 175 210 0.48
Sequence Information
- Coding Sequence
- ATGGATGTCCAGTTGCTGTACACACTGAGCAATGATCCGGAGCGCAAGATATTCCTCGACaatttgttcaaatttatGCAAGAACGAGGTACGCCGATCAATCGATTACCGATCATGGCCAAGCACGTGCTCGATCTCTACGAGCTGTACAATCTCGTCGTAGCTCGGGGTGGACTGGTCGACGTGATCAACAAAAAGCTGTGGCAGGAGATCATCAAAGGACTGCACTTGCCCGCGTCGATAACCTCGGCGGCGTTCACGCTCCGCACCCAATACATGAAGTACTTGTACGCGTACGAGTGCGACAAGCTGAATCTGTCGACGCCGGACCAGCTGACCGTGGCCATAGACGGCAACAAGCGCGAGGGCCGCAGGACGACCTACAGCAATCATCGCGAGCTCACCCCCGAGATCATGTCGAGGGCGGCCATGAACGGCGCCTCCAATCCCATGTCGCTGCCGAGCAATCTGGCGCCGCTGCAGCTCGTGGCGGGCTCCGGGGTCGGCCAGTCGGCCGGACCCAGCGGCATGAACGGCATCTCGCAGGCCCAATTGAATCATTACTCCCAacatctgcagcagcagcaacagcagcaacagaacgCCGCCGCGGCGGCGAGCTTGCAGCTCGGTGGTGGCGCAGCGTCTAGCGCGAATATCGAGCAAGTCAGCGAGTACCTCAGGAGTCTGCAGCGCGAGATGAACGGCCAGCACGGCCAGCCCGCGGATCTGatggctgccgctgccgcagTGGCCAGTCAGAGTATGGCCGCGAAACTGTCGCCACCGCGCAACGGCATCGACCTGTTCGAGATGTCGAGGATCCACTCGATCTGGAGCACCATCTACAACAACAACGTGCACCCGGCAGTGTCGGCCGCCGCGGCCGCGGCCATGGGCTTGAATCAGTTGAGCGCCACCGGAGTGGcctcgtcgccgccgccgccgccgtcgtcgcgcGTCAACACCACGTCCCCGCCTCTGCGCTCCATGGAGTCGGTCGGCGAGCCCCAGCAAGAGGCTCTGGATTTGGGCGTGAgaacgtcgacgtcgtcgtcgcccgtGGCGCGCAGCCCCAAGCCCGTGACGAAACGAGAGCGCGAGCCCGAGGAGGAGCTGGTCAACCAGACGCCCAAGAAACAGTGCGTCGTTCGCTGCAAAGATCGATCGAACAAAAAGTCGATGTCAATCAACATGGAAATTAACGGCGTTATGTACTCGGGTGTGCTCTATCCCGCCGAATCGGTagataagaaaaaagtcaatcacgacgacgaggatAGCAGCAACGAAGATCCTGCCGGAGATAAGGAGAGCGCAGAAAATTAA
- Protein Sequence
- MDVQLLYTLSNDPERKIFLDNLFKFMQERGTPINRLPIMAKHVLDLYELYNLVVARGGLVDVINKKLWQEIIKGLHLPASITSAAFTLRTQYMKYLYAYECDKLNLSTPDQLTVAIDGNKREGRRTTYSNHRELTPEIMSRAAMNGASNPMSLPSNLAPLQLVAGSGVGQSAGPSGMNGISQAQLNHYSQHLQQQQQQQQNAAAAASLQLGGGAASSANIEQVSEYLRSLQREMNGQHGQPADLMAAAAAVASQSMAAKLSPPRNGIDLFEMSRIHSIWSTIYNNNVHPAVSAAAAAAMGLNQLSATGVASSPPPPPSSRVNTTSPPLRSMESVGEPQQEALDLGVRTSTSSSPVARSPKPVTKREREPEEELVNQTPKKQCVVRCKDRSNKKSMSINMEINGVMYSGVLYPAESVDKKKVNHDDEDSSNEDPAGDKESAEN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01483625;
- 90% Identity
- iTF_01483625;
- 80% Identity
- -