Tbra012089.1
Basic Information
- Insect
- Trichogramma brassicae
- Gene Symbol
- pnr
- Assembly
- GCA_902806795.1
- Location
- CADCXV010000963.1:143959-147573[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.3e-18 1.1e-14 53.6 2.6 1 34 71 103 71 105 0.96 2 2 2.8e-19 9.4e-16 57.0 6.2 1 35 125 158 125 159 0.98
Sequence Information
- Coding Sequence
- ATGGGTCCACATTCGAGTCATGCACACCCTCACGCGGGTCATCCACATACAGCGCATCCTCATACAAGTttagcagcagctgcagcatcGCCATTTTATGCTCAAAATGTTGCAATGATGTCGTCGTGGCGGGCATACGATAGTGCCGGCTTTCAAAGGGCCTCTCCATAtgAAACGACTATGGACTTTCAGTTTAGTGAAGGTCGAGAATGTGTAAATTGTGGTGCCATTTCCACGCCACTGTGGCGTCGCGACGGGACTGGGCATTATCTTTGTAATGCTTGTGGCCTCTATCACAAAATAAATGGAATGAATCGACCTCTCATAAAACCAACCAAACGCTTGACGGCGACGAGAAGATTGGGCCTATGCTGCACGAATTGCGGTACCCGTACAACTACTCTTTGGAGGCGCAACAACGAAGGCGAACCCGTGTGCAACGCCTGCGGCCTTTACTTTAAGCTTCATGGTGTCAATCGACCGTTGGCCATGCGAAAAGATGGAATACAAACCCGCAAAAGAAAACCCAAGAAGACACCCGAGCCAAACTCACGACAGTCCAGCTCAGACCACAACGACAGTCTCACTTCCACAGCTTCGTCACCTTCAGATATTAAAAGTGGGCATCTTGCATCGCATCAGCAACAGCCGCACCAACATCAATTGGAAGTAAAATCAACGTCGACAAGCTCACCGACGGAACGTCCAGTATACTTGGGTCATACGCCCTTGCTACCGTCCAACGCGGCGACGGGCAGTATACCAACAGTCAAAACGGAGCCTCGAAGTTGCGATGGTGGCGTGATAAGCCAGCCTTATTCTTCTTACTATCAGCATCCCCACCAGCTCGGTGTGCCATCGAGCGAGCATCAGCAGGCAGCAGCGTATTATGCAAGCCAGGAAGCTCCTTATCATCATCAGCACCACGTCACTGCATCGGCCAAGCTTCTAGCCTCATCATGA
- Protein Sequence
- MGPHSSHAHPHAGHPHTAHPHTSLAAAAASPFYAQNVAMMSSWRAYDSAGFQRASPYETTMDFQFSEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKINGMNRPLIKPTKRLTATRRLGLCCTNCGTRTTTLWRRNNEGEPVCNACGLYFKLHGVNRPLAMRKDGIQTRKRKPKKTPEPNSRQSSSDHNDSLTSTASSPSDIKSGHLASHQQQPHQHQLEVKSTSTSSPTERPVYLGHTPLLPSNAATGSIPTVKTEPRSCDGGVISQPYSSYYQHPHQLGVPSSEHQQAAAYYASQEAPYHHQHHVTASAKLLASS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -