Basic Information

Insect: Trichogramma brassicae
Gene Symbol: lola
Assembly: GCA_902806795.1
Location: CADCXV010000080.1:328186-363230[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.13 5.5 7.6 0.8 1 19 252 270 252 273 0.94

2 16 0.0046 0.2 12.1 3.2 1 23 282 304 282 305 0.96

3 16 0.077 3.3 8.3 3.4 1 21 345 365 345 366 0.95

4 16 0.00045 0.019 15.3 3.0 1 23 374 397 374 397 0.98

5 16 0.00011 0.0048 17.2 0.4 1 21 479 499 479 500 0.97

6 16 0.35 15 6.2 0.2 1 23 508 531 508 531 0.95

7 16 0.036 1.5 9.3 1.8 2 23 648 669 647 669 0.96

8 16 0.5 21 5.7 3.9 1 20 689 708 689 710 0.94

9 16 0.0023 0.097 13.1 3.3 1 21 788 808 788 809 0.97

10 16 0.0024 0.1 13.1 5.4 1 19 817 835 817 839 0.94

11 16 0.00023 0.0097 16.2 1.8 3 21 894 912 893 913 0.95

12 16 0.25 10 6.7 11.1 1 23 921 944 921 944 0.96

13 16 0.25 11 6.7 0.9 1 20 1449 1468 1449 1470 0.92

14 16 0.073 3.1 8.4 1.6 1 23 1476 1499 1476 1499 0.97

15 16 0.021 0.87 10.1 5.1 1 21 1593 1613 1593 1614 0.94

16 16 0.01 0.44 11.0 1.2 1 23 1622 1645 1622 1645 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.13	5.5	7.6	0.8	1	19	252	270	252	273	0.94
2	16	0.0046	0.2	12.1	3.2	1	23	282	304	282	305	0.96
3	16	0.077	3.3	8.3	3.4	1	21	345	365	345	366	0.95
4	16	0.00045	0.019	15.3	3.0	1	23	374	397	374	397	0.98
5	16	0.00011	0.0048	17.2	0.4	1	21	479	499	479	500	0.97
6	16	0.35	15	6.2	0.2	1	23	508	531	508	531	0.95
7	16	0.036	1.5	9.3	1.8	2	23	648	669	647	669	0.96
8	16	0.5	21	5.7	3.9	1	20	689	708	689	710	0.94
9	16	0.0023	0.097	13.1	3.3	1	21	788	808	788	809	0.97
10	16	0.0024	0.1	13.1	5.4	1	19	817	835	817	839	0.94
11	16	0.00023	0.0097	16.2	1.8	3	21	894	912	893	913	0.95
12	16	0.25	10	6.7	11.1	1	23	921	944	921	944	0.96
13	16	0.25	11	6.7	0.9	1	20	1449	1468	1449	1470	0.92
14	16	0.073	3.1	8.4	1.6	1	23	1476	1499	1476	1499	0.97
15	16	0.021	0.87	10.1	5.1	1	21	1593	1613	1593	1614	0.94
16	16	0.01	0.44	11.0	1.2	1	23	1622	1645	1622	1645	0.97

Sequence Information

Coding Sequence: ATGGCTTGCAGTCACTGGGATAGAAGTTTCAAGTGGAAATCCGATTCGCAACGATATCGAGATTTCGTCAAATGCCGCGATgggctttctctctttctcaaaCGTCTTCACGGGTACACTGGATCGCTCCGTACTGACTCCAAGGCATCTCGGCGTGCCGAACCCCTCTGCTTTATGTTCACAGTGGCCAGGAATCGCAGCAgtaccgcagcagcagcggcggcagcggccgCCGGAGGAAATCGCCTGAGCATGATGTCCATGCTGAATCGCAACTTCAAGCAGTTCGCCAAGAAGAGGCGCCCGCTGACGCGCAGCCGTAGCGACTTTCAtcagccgcagccgcagccgccgAGCTCGAGCCAAGCCTCGACGCCGCTCCACCATCAGCTGTCGCTGCGCGGCCGCGACGAGCTGCAGATCGAGGCGCTGGACGAGGACGAggcctcgtcgtcgcgcgacAGCCTCGTGTTCCCGGCCTCGCTCGGCCTCGTGTCCCGCCACCAGCTCGAACTCCAGCAGGCGCGCCAGCGccaattgcagcagcagcgcgccgccgccgcggccgtGGCAGCGGCCAGCTCCACGGCCAAGACCAGCTCCTCGGAGGCGGCCTCGACGCCGGGCAAGGCGACGGCGGCCATCGACGCGTCCAAGTCCAGCGGCGGCGAGCTCAACAAGCCGAATCTGTCCATCTCGCCGGCCTCGCTGCTGGCGCAGTCGGCCCGCCTCGAGCCCAGCCACCAGCGCGAGTTCCGCTGCAGATTCTGCGGCAAGGGCTACAGGTGGAAGAGCACAATGAGGCGACACGAGAGCCTCGAGTGCGGCGACAAGCCTCCGAGCTTTCAGTGCTCCCAGTGCCCGTACAAGGCGCGCCAGCGGGGCAATCTGACGGTGCACTTCAAGCGCCACCATCAGAACAACTCGCTCGATATCATTCGATTGCCGTCCGGACTCGCGGAGCAGGCGACGACGGCGGgggtggcagcggcagcgtcgTCGCACACGTTGAATCCTGAGCAGGAGCAGAAGTATCCGTGCGACAATTGCAGCAGCGTCTTTAGTCGCAAGTGTAATCTTTATTATCACCGCAAGTACGAGTGCGGCCAGCCGCCGCGCTTTCAGTGCCCCTATTGTCGCTACCGCACGCGCCACCAATCGAACGTCCGGGCTCACGTGAAGCGCATTCACTGCGGCCTCCAGGTTTACTTCATCGACTTTCTAATTTACACAACTGCATCAAGAAGATTCTTAAGCCTGgccTACGGAGATCCGCTGAACATCCACGATCCGGACTTCACGTATTTCCCGCGTCGTCGGCGCAACGTCATGACCCAGCAAGAGTATCGTCGACTGCTATCCTCGATAATCGAGCTGCCGACACCCTGCGACAGGCCCGACGACCTCAGCACTTATCGCGGCACGCCGAAAAATTTCCAATGCCCCAAGTGCCCGAAGCGCTTCTCGGCCCGCAGCAGCGTCGTCCAGCACATGCGCTACGACTGCAATCGAGCGCCCAGGTTCGCTTGCCCCTACTGCGAGATACAGAGCAAGTGGCCGTTTAGCCTGTACAAGCACATAAGAAACGTGCATCCGGGCCTCAAGGTCTACTGCAACGACATGTCCACGGACAAATATTCGTCGGCGGGCAGCGTCCTCGGCGGCTGCCCTGAACATGTTCCGCTGCATGAGATGCTCGCGCAAGTTCCGAGTTTACAACAGCCTCTATCGTCACGTGCGCTACGAGTGCGGGAAAAAGCCGCGAttcggctgctgctactgctcctACGTTACCAAGCACACGAGCAGCGTCTACGTGCACGTCAAGCGCATGCACACCGGCCAGCAGCTCGGCTACAGGGACGTGGCCGGCGACAAAATCTTTCTCAAATAAATTGCCAGAcattattttGTGTTGAGCTTTCGCAGCCGCAGTGGCTGATTTGCCCGCACTGTCCGCGTCTGTTGGAGACGGACGAGTGCCTCCAACGCCACTTGCGCAGCCACGATTATTCGAGGGTCATCACGCACGATCCACTCGGCCGAGCCCCGCCGGCCATTCAGCACAGATGCAATTATTGCGAGTACACGTCGAAATACACGTCGAATATACATAAGCACATCTATAGGATAAGCTTGCCGGAAGATCCGTCGATGCCGGATCCGCAATTGATTCTCTTTGAGCCGGACACGACACCGCAGATCAGAAATATTAACTCGGCGCCCGGTCGCTTTCCTTGCGGGCGCTGTGatCGAAGTCAATTTCCAAGAAGTAGTCGACGTAATAattactGGTCAAGCTCCATCACTGGCGGGCCATACGATTCTGtaatacatgaaaataatcaatcggGAAAACATTTCAAGTGTCCTAATTGCGATCGACGGTACTTGAGACACAGTACTCTCAAACGCCATCAAAGATATGAATGCGGACAGCCACCCAAGTATCAGTGCCAAAAGTGTCATAAGCGGTTCAAACACAAACACGCTCTTGAGGAGCATGATATTGTGCATCCAGGAGGAAATGTTTTCGTCACCGAAGTTGCCGAGACGATTGAGCTATCCACGTCTACGCAGTCCTACGAAGACGTCCTCGCACAGCCACAGCCTTCTCTAGTGCTTCCACAGATTGTCGCACCGATCCCGACGACCGCTAAGAATTCCGCGCGTAATATCTGCCACCAGTGCGGAAAGTCGTACGTGCACTTGACCACGCTGAAGCGTCACTTGCGCTATGAGTGCAACAAACCGCCCCGTTTCTGCTGCGTCTATTGTCCGCAGCGCTGCAAACACAAGACCGATCTGAAATCGCACATGCTCCGCTGTCACAAGGGCCAAAAGCTCAGCTTTTTCATTTGCGACGACAACGAGGCATCCCCTCGCCCTGGAGAGTACCCAGTATCCCCCGATACGGCCGGTGGAACGAATCTACGTGGACTACTCAGGAAAGCGCGGCTTCGTCTGCGATCGCTGCGGAAAATCTTACGAGTATCAGAGCAATCTGGGCCGACACAAGCGCTACGAGTGCGGCGTTCAGCCGCGATTTTCTTGCGCGTACTGTGGTCAGAATTTGCAATAGTTTCAGGTAATTGGAAGATCAGACCCGTGCCTTCGTTAACTAAAATCTCTAGACCTAAACCTAAACCTAGCCACGTACGTGACTTATTTAGATCGGAGATTGAAAATGACCGCAGCAAGAGTAAAAATGTCCCTAGCGCGAATCAACATATCCAGATCAAGAATGAAAATATCCAAtacaattatgaaaatgacCGCAGCAAGAGTGAAAATGTCCCTAGCGCGAATCAACATATCCAGATCAAGAATGAAAATATCCAAtacaattatgaaaatgtCCGTAGCACTGTAATAACTTCTGTGCCATCACTGTACGGAGctcgTCGTAAAAAAGGGCGCCCTGCATCGTCGGCATTCAAGAATCCACGATCTTTCACGAGCATTCCGCTGAGCCAGACCGAAGCAATCATGTCTATCCTGCCGAACCCGCTCACCATGCAGAAGACAGTGTCTAAGCACTTCCCGAATCTCTCTCCCGAGGTGTCATTGGAAAAGGTCAAGGTTCAAAAGAATAAGAAAGACGAAACCGCCAAGAGACGATCGACGACGCGCAACGTCGATTATAGGGAGCGATCGTCTCGGTCCCCAGTAGTCGAAAATGGCGCTAGAGTAATGAgcaaaaagtcgaaaaaagacaaaaataaaaagcgcGGTAGGCCTGCTAAAAGCCGCCACTACGGTATACCCGTAATAAAAgtcgaaaagaaagaagatgaCTTCATTGATGTAGTTGGCTTAGAGCCCCGTGAAAGAAACGACGATAATCGTAAGAAACGCGCAGGTAGACCGCCGCGTAAGTTGCCGCTCGATAATAAAACTGTCAAGGTAGAGGATGTATTGTCCAAATTAAAAACGAGAGattacggaaaaatgaaaaagaaaggacGCGGCAGGCCCAAACGCCTTTTCAATTCTCTGCCCCTTGTTAAAAGCGAAATAAACGACTTGAAGCTAAAATCGTCATACGTCAAGCTTACCAAGCTTGTGGTTCCTGACAAAACTGACAAAGGGCCACAACAATCCGAAGCTTCCATCGACGCGCAACCCGAGCTTCCATCCGATGGCGATTCTGCTGTCGTCAAGCCTGATAATCCTGAAAATAATCCCGACTGTAACATTTACGAAATAGCCAACGGTGCTAGCGTGGAGGAGGTGAAATCCTCCGACGAGGCGgATCCCATCGCGATCGACGACACGACCGTCTGGCTGCAGGAAGAttcgtcggcggcggcagcggcggggGGCGCGCTGAACTTCACGAGCTACTTGTGCAAGAACTGCAGCGCGGGCTTTCGTCGCGTCGCCGATCTCTATAGGCACAAGTGCGGCCCGATACCGCCCCGATACGCCTGCCCGTACTGCGAGAAGCGAGATCACTACTCGTCCAACATCAATCGGCATATCAAACGATGGCATCCCAATATGCCTATCAAATCCCCTAGCGCCCGAGCATCCGGGCTACATACTGCTGTCGACCTCCTACAAGCGCTTCCAGTGCCTCAAGTGCAATCGGCGCTTCAGCCAAAAATCGACCATGATCGACCATTTGCGCTACTTCTGCGGCAAGGGCCGCCAGTACAAGTGCCCGTACTGCGAGACCCTCGGCCACAGCTCGTCCAACATTTATCAGCACgtAGCCAGGCCTACGCCGCTCGACCGACGAGGCAACCCAGGTTGGCCCAGGGAAACAAGCGACACCCGTGTCCGCGCTGCTCGCGCACCTACAAGCACCGCAGCCACATGCTGCGTCACTACAAGTACGAGTGCGAGTCCAGTCACAGATTTCAGTGTCCGTACTGTCAGCTGCCCCTGAGGCAGCGCACCCAGGCCTGGCGACACATCAAGCACCTGCATCCGAATCAGCAGATGTActgcatcgacgtggccacgAACACCACCCTCGTGCGCTCCGGCTGGTCGAATAACTAA
Protein Sequence: MACSHWDRSFKWKSDSQRYRDFVKCRDGLSLFLKRLHGYTGSLRTDSKASRRAEPLCFMFTVARNRSSTAAAAAAAAAGGNRLSMMSMLNRNFKQFAKKRRPLTRSRSDFHQPQPQPPSSSQASTPLHHQLSLRGRDELQIEALDEDEASSSRDSLVFPASLGLVSRHQLELQQARQRQLQQQRAAAAAVAAASSTAKTSSSEAASTPGKATAAIDASKSSGGELNKPNLSISPASLLAQSARLEPSHQREFRCRFCGKGYRWKSTMRRHESLECGDKPPSFQCSQCPYKARQRGNLTVHFKRHHQNNSLDIIRLPSGLAEQATTAGVAAAASSHTLNPEQEQKYPCDNCSSVFSRKCNLYYHRKYECGQPPRFQCPYCRYRTRHQSNVRAHVKRIHCGLQVYFIDFLIYTTASRRFLSLAYGDPLNIHDPDFTYFPRRRRNVMTQQEYRRLLSSIIELPTPCDRPDDLSTYRGTPKNFQCPKCPKRFSARSSVVQHMRYDCNRAPRFACPYCEIQSKWPFSLYKHIRNVHPGLKVYCNDMSTDKYSSAGSVLGGCPEHVPLHEMLAQVPSLQQPLSSRALRVREKAAIRLLLLLLRYQAHEQRLRARQAHAHRPAARLQGRGRRQNLSQINCQTLFCVELSQPQWLICPHCPRLLETDECLQRHLRSHDYSRVITHDPLGRAPPAIQHRCNYCEYTSKYTSNIHKHIYRISLPEDPSMPDPQLILFEPDTTPQIRNINSAPGRFPCGRCDRSQFPRSSRRNNYWSSSITGGPYDSVIHENNQSGKHFKCPNCDRRYLRHSTLKRHQRYECGQPPKYQCQKCHKRFKHKHALEEHDIVHPGGNVFVTEVAETIELSTSTQSYEDVLAQPQPSLVLPQIVAPIPTTAKNSARNICHQCGKSYVHLTTLKRHLRYECNKPPRFCCVYCPQRCKHKTDLKSHMLRCHKGQKLSFFICDDNEASPRPGEYPVSPDTAGGTNLRGLLRKARLRLRSLRKILRVSEQSGPTQALRVRRSAAIFLRVLWSEFAIVSGNWKIRPVPSLTKISRPKPKPSHVRDLFRSEIENDRSKSKNVPSANQHIQIKNENIQYNYENDRSKSENVPSANQHIQIKNENIQYNYENVRSTVITSVPSLYGARRKKGRPASSAFKNPRSFTSIPLSQTEAIMSILPNPLTMQKTVSKHFPNLSPEVSLEKVKVQKNKKDETAKRRSTTRNVDYRERSSRSPVVENGARVMSKKSKKDKNKKRGRPAKSRHYGIPVIKVEKKEDDFIDVVGLEPRERNDDNRKKRAGRPPRKLPLDNKTVKVEDVLSKLKTRDYGKMKKKGRGRPKRLFNSLPLVKSEINDLKLKSSYVKLTKLVVPDKTDKGPQQSEASIDAQPELPSDGDSAVVKPDNPENNPDCNIYEIANGASVEEVKSSDEADPIAIDDTTVWLQEDSSAAAAAGGALNFTSYLCKNCSAGFRRVADLYRHKCGPIPPRYACPYCEKRDHYSSNINRHIKRWHPNMPIKSPSARASGLHTAVDLLQALPVPQVQSALQPKIDHDRPFALLLRQGPPVQVPVLRDPRPQLVQHLSARSQAYAARPTRQPRLAQGNKRHPCPRCSRTYKHRSHMLRHYKYECESSHRFQCPYCQLPLRQRTQAWRHIKHLHPNQQMYCIDVATNTTLVRSGWSNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -