Basic Information

Insect: Trichogramma brassicae
Gene Symbol: mecom-b
Assembly: GCA_902806795.1
Location: CADCXV010000670.1:111441-139252[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.00083 0.035 14.5 0.2 8 23 428 443 424 444 0.90

2 7 3e-05 0.0013 19.0 2.1 1 23 450 472 450 472 0.95

3 7 7.5e-06 0.00032 20.9 4.5 1 23 478 500 478 500 0.98

4 7 0.0035 0.15 12.5 1.4 2 20 508 526 507 527 0.93

5 7 5.2e-08 2.2e-06 27.7 1.7 1 23 952 974 952 974 0.99

6 7 1.1e-05 0.00047 20.4 3.5 1 23 980 1003 980 1004 0.97

7 7 0.00023 0.0097 16.2 5.0 1 23 1009 1031 1009 1031 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.00083	0.035	14.5	0.2	8	23	428	443	424	444	0.90
2	7	3e-05	0.0013	19.0	2.1	1	23	450	472	450	472	0.95
3	7	7.5e-06	0.00032	20.9	4.5	1	23	478	500	478	500	0.98
4	7	0.0035	0.15	12.5	1.4	2	20	508	526	507	527	0.93
5	7	5.2e-08	2.2e-06	27.7	1.7	1	23	952	974	952	974	0.99
6	7	1.1e-05	0.00047	20.4	3.5	1	23	980	1003	980	1004	0.97
7	7	0.00023	0.0097	16.2	5.0	1	23	1009	1031	1009	1031	0.98

Sequence Information

Coding Sequence: ATGAGCGACGATAACGCCGAGTGTCTGGATCTGTCCAGCGCGACGCTGGATTACAAGAGCTGCGGAAGCAGCGACGAGGGCGAGCCAGCTAGTGGCGGAGCGAGGAGCGTCGGGGGTGGCTGCGAGAGCGGCGAAATGGAGGAGAACGGCTCGTTGCGCTCGTTGAGCTCGGCCTCGAGCAGCGTAGGAGGAGGTGGTGGCAGTGGCGGCGTTGGCGGTGGTATCGACGTCGGCGCCGGGGCCGGCGACAGCCTCAGCCAGTCGTCGGCCAGCGCCGCCGCTTTTCAACAGCAActacagcagcatcagcgaaACCAACTCGGCGACTACAGCAGGCTCATACCGAGCAACGTGCTCGAGAACGTGCTCGGCAACGCGCGACTGACCAACCTCGACTGTTTCAATCTGCTCATGAACGAACTGAAGCAGCGCACCTCGATGGACGGGAACGCGATCCTGCCCGAGGATCACGATGCCCGCCAGCTGACCAGATATCTGCTCGGCCTGTCGCACGAAAAGTTTCAACAAGTTGCAAAGGAAATGGTGAGTCAGGAGATGCTGCCGAAGGCCATCGAGCTGAGACTCTCGTCCGCGGGCCGACCTTTCGTGCGAGCTCGCAAAGACATCAGACCCGGCGAAATTATCGAATTGCCCAGATGCAACAGCGGCAACATCTGGTGGAGCACCAATCCCAAATTCGATGAGACTTATTACGGAGTGGTGGTGAAAAAGGATTGGTTCAGGTTCGTTCCCGTCGTATGCAATAAAAATGAGGCGAACGTGGAAAAACTTCATAATCAAGATGGATGGGGATATTATTTGGCAAAGAAAACGATATATGCCGGCGAAGAGCTGATCTCGTACGTGGCGCCGGGACAAGAGCAagaacaacagcagcaacaacagcagcgacagcgtcagcaacagcaacagcaacggcTGACCGAGGACGAAAACACCAGCGAGTTCGAGGGTAGCAGCGATCGCGGGCAACGTCGTCGGCGCGCCAAGTGTACTCAACAGCCATCTCATCACGAAGCATCGATACCCCTCGGGCGTGCACAACTGCAAGAGCTGTCCGGCCGCGTACGCctggctgccgctgctcgttCGCCACCGAGTCGTCGCCCACGGCGACGTGCGCAAGTACTGCTGCGAGAACTGCACCAAGGTAAGTCGGAGCGATCCCCGCGCATCGCAAAAAatctctatctatctatacTCTCGAGCTTTACACCCTTGTACTTTCAATCTCTCGCTAAACAGCCGTGTGACTCGCCGCAGGTCTTCACCGACGCCTCGAATCTCCAGCGCCACATCAGGAGCCACCACGTGGGCGCCCGCAGCCACGCCTGCTCGCAGTGCGGCAAGACCTTCGCCACGAGCTCGGGCCTGAAGCAGCACGCCCACATACACAGCAGCGTTAAGCCGTTCATCTGTCCGGTCTGCAAGAAGTCCTACACGCAGTTCTCGAATCTCTGCCGGCACAAGCGCATGCACACCAAGTGCCAGACCCCGATAGTCTGCGACAAGTGCAACGCCACCTTCCAGACGACCTCGCACCTCACCAAGCACAAAAAGTGCTGCGGCACCTTTCCCTCGCTGCAGTcgccccagcagcagcagcaccaccagcagcaccaccaaCAGTCGGGACAGCTTCCTCCgtcggcgcagcagcagcccaccGGGGTGGCGCCGCTGCCGCAGCCACCGAGCGACACCAACATGCAGACCAATCCCTTCCTCTATCCAGGACAGTCGCTCTTCCCGCACTTCTATCCATCGACGGTTTACTGTCGGCGACGATGGACAGACGATTTTTGGAAACGACTCAGCAGCCGCTCAAGCTCGAACCGACGGGAGGACGATCCTCGACAGCAGGACAGTCAGACGCCGCCGCGAATGATGCCGCCAACCAGTCAGGAGCTGCAGGTCTCCAGCAAAGTGTCGCCCAGCGCCGCGGAAGAGGCGACCTCGAGCTTGAGACCGTCGCCCGCGAGACCACCGGCGTCCCAGACCGAGCGCGAGCACGAGCGTTCGCGTAGCccggaagaggaggaggaggaggagccAAGAATAAAGGCTGAAATAAAGGCCGAAGTCAAGGCCGAAGTGAAAAATGAATCGTCCGATTCGCTGACGGAGCTACCGTTGGATCTCAGCGTGTCCAAAAAACACCAacacgaagacgacgacgaagataaAGAATACGAGGCTAAAGACGTAGTTAAGAGACGAAGAACTAGCTTCGAATCCGAGGTAGAAGAACGACGCAGCGATGCAAAGTCGGCGTCGCCCCAACCGACCACGACGACCAAGGTCGATCCGGAGTCGCCGATAGCTAGATCTAGATCGTCGCGAGAAAAGACACTGTCTCCCGATATCAAAAATACCCCTgtacatagcagcagcagcccgctACGGCCGAGCCAAGATAGGACGCTGACTCCGCCCACGCTGTCGCATCACGAGGCAGCGCTGGCGCCGCACATGGTCTATCCGAAACCCGTGCACCACCCACTGTTCCTCGAAAACATGTACCGTAACCAGTCGGTGAGTCAGTTTCCCAATTTCTCAGCGGCGACGAATCCTCTGCAGACCATGCAGGCGTACGGTCGTGGCTTGCCTTTTCTAGGTCCCTTCGGCAATGGCTTCGGCGCGCCGCCGAGGCCCAATTACTCCGCCGTGCTGCAGAGAGCGCCGACGGCCGCCTCGGCTTACGGCTCGTTCGCTGCCGACGCGATGATGGCCGCGGCCGCGGCCCGCCAccagccgcagcagcatcatcatcagcagccGCCGCCCGCCCTCTTCTCGAACGCCGTGACGCAGAACCGAGTGCGCGACAGATACTCGTGCAAGTTCTGCGGCAAGAATTTCCCGCGCTCGGCCAATTTGACGCGGCACCTGCGCACCCACACGGGCGAGCAGCCCTACAAGTGCAAATTCTGCGAGCGCAGCTTCAGCATCTCGAGCAATCTGCAGCGCCACGTGCGAAACATACATCACAAGGAGCGGCCCTTCGAGTGCCAGACGTGCAAGCGATGCTTCGGCCAGCAGACGAATCTCGACCGGCATCTCAAGAAGCACGAGGCCGAGGACGGCACGATGGTGGCGTCGGTGGCCGACTCGGCCGAGAGCAGCAACGAGAACGAGCGCGAGGAGGCCGCCTACTTCGACGAGATACGCTCGTTCATGGGCAAAGTCACCtacaacggcggcggcggcggcgggggAGCTCGCAACGAGCCCTACGACTTCACTCCGCCGCACCAGCAGGCGGCCCACATACCCGGCGCCAACGCGAGCTACGAAGCCGCTGCCGCGGTGTCGTCCAAAATCGCTGACAGCAGCATCGTCCACGACGACAGCAGCGAGGATGCCCTGTCGCCCGAGGCCACCTCGCCACAGCGCTTCGATCTGCAGATCGAGGGCAAGCGAGAACTGTTGAACAACAACATGGTTGAGCCGGTTCTCGGCGTGTCCTCATAG
Protein Sequence: MSDDNAECLDLSSATLDYKSCGSSDEGEPASGGARSVGGGCESGEMEENGSLRSLSSASSSVGGGGGSGGVGGGIDVGAGAGDSLSQSSASAAAFQQQLQQHQRNQLGDYSRLIPSNVLENVLGNARLTNLDCFNLLMNELKQRTSMDGNAILPEDHDARQLTRYLLGLSHEKFQQVAKEMVSQEMLPKAIELRLSSAGRPFVRARKDIRPGEIIELPRCNSGNIWWSTNPKFDETYYGVVVKKDWFRFVPVVCNKNEANVEKLHNQDGWGYYLAKKTIYAGEELISYVAPGQEQEQQQQQQQRQRQQQQQQRLTEDENTSEFEGSSDRGQRRRRAKCTQQPSHHEASIPLGRAQLQELSGRVRLAAAARSPPSRRPRRRAQVLLRELHQGKSERSPRIAKNLYLSILSSFTPLYFQSLAKQPCDSPQVFTDASNLQRHIRSHHVGARSHACSQCGKTFATSSGLKQHAHIHSSVKPFICPVCKKSYTQFSNLCRHKRMHTKCQTPIVCDKCNATFQTTSHLTKHKKCCGTFPSLQSPQQQQHHQQHHQQSGQLPPSAQQQPTGVAPLPQPPSDTNMQTNPFLYPGQSLFPHFYPSTVYCRRRWTDDFWKRLSSRSSSNRREDDPRQQDSQTPPRMMPPTSQELQVSSKVSPSAAEEATSSLRPSPARPPASQTEREHERSRSPEEEEEEEPRIKAEIKAEVKAEVKNESSDSLTELPLDLSVSKKHQHEDDDEDKEYEAKDVVKRRRTSFESEVEERRSDAKSASPQPTTTTKVDPESPIARSRSSREKTLSPDIKNTPVHSSSSPLRPSQDRTLTPPTLSHHEAALAPHMVYPKPVHHPLFLENMYRNQSVSQFPNFSAATNPLQTMQAYGRGLPFLGPFGNGFGAPPRPNYSAVLQRAPTAASAYGSFAADAMMAAAAARHQPQQHHHQQPPPALFSNAVTQNRVRDRYSCKFCGKNFPRSANLTRHLRTHTGEQPYKCKFCERSFSISSNLQRHVRNIHHKERPFECQTCKRCFGQQTNLDRHLKKHEAEDGTMVASVADSAESSNENEREEAAYFDEIRSFMGKVTYNGGGGGGGARNEPYDFTPPHQQAAHIPGANASYEAAAAVSSKIADSSIVHDDSSEDALSPEATSPQRFDLQIEGKRELLNNNMVEPVLGVSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01485560;
90% Identity: -
80% Identity: -