Basic Information

Insect: Trichogramma brassicae
Gene Symbol: FPV246
Assembly: GCA_902806795.1
Location: CADCXV010000928.1:869991-883999[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 2.6e-06 0.00011 22.4 1.2 1 23 1248 1271 1248 1271 0.98

2 10 9.8e-06 0.00042 20.5 1.6 1 23 1277 1300 1277 1300 0.98

3 10 0.0024 0.1 13.0 3.6 1 23 1306 1329 1306 1329 0.96

4 10 0.00029 0.012 15.9 2.3 1 23 1335 1358 1335 1358 0.97

5 10 0.00024 0.01 16.1 1.8 1 23 1364 1387 1364 1387 0.98

6 10 0.0019 0.082 13.3 2.4 1 23 1393 1416 1393 1416 0.96

7 10 3.4e-06 0.00015 22.0 1.5 1 23 1422 1445 1422 1445 0.96

8 10 1.3e-05 0.00054 20.2 2.6 1 23 1451 1474 1451 1474 0.98

9 10 0.0001 0.0042 17.4 1.4 1 23 1480 1503 1480 1503 0.97

10 10 0.00059 0.025 14.9 2.8 1 23 1509 1532 1509 1532 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	2.6e-06	0.00011	22.4	1.2	1	23	1248	1271	1248	1271	0.98
2	10	9.8e-06	0.00042	20.5	1.6	1	23	1277	1300	1277	1300	0.98
3	10	0.0024	0.1	13.0	3.6	1	23	1306	1329	1306	1329	0.96
4	10	0.00029	0.012	15.9	2.3	1	23	1335	1358	1335	1358	0.97
5	10	0.00024	0.01	16.1	1.8	1	23	1364	1387	1364	1387	0.98
6	10	0.0019	0.082	13.3	2.4	1	23	1393	1416	1393	1416	0.96
7	10	3.4e-06	0.00015	22.0	1.5	1	23	1422	1445	1422	1445	0.96
8	10	1.3e-05	0.00054	20.2	2.6	1	23	1451	1474	1451	1474	0.98
9	10	0.0001	0.0042	17.4	1.4	1	23	1480	1503	1480	1503	0.97
10	10	0.00059	0.025	14.9	2.8	1	23	1509	1532	1509	1532	0.96

Sequence Information

Coding Sequence: atgagagagaaagtcgTTCGGCAGATGCAACAAAATGGAAAGAATATCACACCGGAAATTCATCCACTGATAAGGAATTGGGAGGGTCAAAAGCCAGACCTTGGAAAAATCTTTCGTCGAGAAGAAATGGACTGGCTTCTCAAGGAGTACGTAGAGTTCGTTAAAATTCACAGTGCGTTGGAAACGAATCTACTCACTTTCGCGATCGAATGCGGTTACAAAGACAAGCCCGAAATTGATAAAGGCGGCAAGCCACTACTGCGTCGAACTACGCCGGTACATCATGCGGCTAGGAGTAATAAAAGTTACGTCATCTCCGATCTCTtcaaaatatacgacagattcgacgcGAACTACGTCGACGAATTTGGATTAAcgcattttcatgtggcctCCCAGTGCGGTTACGATGACCTCGTCatgaaatttctcgagctcgggcaAGATCCCAATTGTCTACTTCAAAAATCCGTCGatccgccgctgcacttggccctGGCCGGCAGTCACAAGAAGGTGGCCGAAACACTGCTCAGAAACGGAGCCGATCCGAATTCAACCGACGATTACGgatcgacgcctctgcacgtcatttgTCAGAACGACTTTGACGTCGAATTCATCGAGCTGttcttcaagatcaacgacgaGAAGCATCGACTAGTGCGGCTGAATAGCCGGGACAAATTCAACGAtacaccgttgcacttggcgcTGCAATTCGCGAACGAGTACAGCGTCGAGCAGGTGGCCAAGTTGTTGCTGgaaagaggcgccgatccgaatgtgGCCAACGTGGATGGCttgacgcctctgcacgtcatcTGCAAGAGGAAGAACGACGCCGCGGACCTCGCGAAGACGCTGTTCCGGATCTGCGACGACAGACAGGTGGTGCACGTCGACGCCTTGGACAACTCGGGCCGTACGCCgcttcaatgggccgtggcgaatctccGTCCGCAGTTGGTCGACGTTATCTTGGATCGCGGCGCGGAACTGTCCAGCTTCGTCTTCCCCACCCCGAGTCAATTCCACAAGGGATTCGTGTCGCTGCTGGAAGAGACGTGGGTCCATTCGAAATTGAGAGCCGTGTCCGGCGCTCGAGCCGTCGTCAAGCGCCTGGAAAGAAGGGGATACAAACTGAACCGGAGGAGCGTCCAGACGATTACGAATTTATTCGAGAAGTATGGATTGTTCGAGAAGACAGATCTCGACCGACTTtggcacgacgacgatgagttTACGAGgattgcgaaaaaaataatgatgaatcCAAACAAGCCTGATGTGGATGAAGGCGGCAAGCCACTACTACGTCGAACCACACTACTGCATCAGGCGGCTAGGAGTAATAAAAGTTACGTCATCCCCGATCTCTGcaaaatatacgacagatttGACGTAGACTACATCGACGAACGTGGGTATACACCTTTTCATGTGGCTTGCACGAATGGCTGTTACGACGTCGTCAAGAAGTTCCTCGAACTTGGCCAAGATCCCAATTGCCTACTTCAGAAATCAGTCTATCCGCCGCTGTATATGGCTTTGTACTATAAGCATCAGAAAGTGGCCGAGTTGCTGCTGAAAAATGGCGCCAACCCTAATTTAGCCAATGAATATGAATTGACGCCTCTGCATGCTATTTGCTCGAGAGAACATGACGATGACCTTGCAGAGCTATTCTTCCAGATGTGCGACGACAATAATCATCAATTACAGGTCGACGCTCGAGACAAGCGTGACCAGACACCTTTGCACTTAGCTGTGTGGAAAACCAATAAGAAGGCAGCTAAATTGCTACTGAagagaggcgccgatccgaatgtgGCCAACGTGAATGGACAGACGCCTCTGCACTTTATTTCCCAGAGAGAATATGACGATGATCTTGCAGAGCTATTCTTCCAGATGTGCGACGACAATAATCTTCCATTACAGGTCGACGCTCGAGACAAGCGTGACCAGACACCTTTGCACTTAGCTGtgtataaaagtaataaaaaagcaGCTAAATTGCTACTGAAGAGAGGGGCTGATCCGAATATAGCCTCCGAGGATGGCTTGACGCCTCTGCACACCATCTGCATGAACAAGACCGATGCTGCTGATTTGGCTGAGACACTATTTCAGGTCTGTGACGATAGACATCAGATGGTACAGGTCGATGCAAAGGACAAGTATGGTCAGACACCGCTTCAATGGGCCGTCGAGTGTCTCCATCCGAATTTGGTGGACGTACTCTTAGATCATGGTGCAAAACTGTCCAACTTCGTTTTTCCCTCATGTCTCCTCAACGTGGAATTTGTGACGCACCTGGACGAAGCGTCAgctcatgaaaaattgaaagtcgTTTTGGACGTTAGGGCCGTTGTCCAAcgcttagaaaaaaaaggatacaaGCTGAAACTGCAGGACATGCAGACGATCACGACATTGTTTGATAAGTATGGACAATGCGATAAGTCGACAAATCTCGACCCACGCTGGTACGAAAAGGAGGAATTCGCGAAAAAGTCGAAACATCTGATGGTGAGTCCGAGtgtgtcgctctacgacctgatcCGCTCAGCACCCGCAAAAGCAGATGAGATACTCACAAATGAAGACTACTATCACAAGCTCGTGTCTTCAACTCAATGGTCGAAGCTTCCCGAACAATTTCGCATTGCGAGTGTTGCGCAGCTGTGCGATATCATGGCGAGAGGACTTTTTTACAAGCGACGAGCATTGGCATCTCTGGTGAAGCTGACGCGCAACAAACTGCCGATTCTTTGCTACGAAATGATCATCGAGCCTCTGATGAACAAAGATTTTGACCCGTGTTGTGCTGCGCGTCGAGTGAGAagctattatatattatatataacgacGATGGCCGAAGAATGCGACCACGTGGGcaacacaccgctgcacttggccaTAGAACGCGGGGACAGCTTCTTGGTCGAATTGTTGCTGAGAAATGCCGCCAACGCGATTCTGTCGATCGAGCAGCCGGTGCGTATCGACGCGCGGAACAAGCTCGGCAGGACGCCGTTGCATCTGGCTCtgggcgcgcgcgacacagCTTCGGCCGAGTCGCTGCTGCagagaggcgccgatccgaacttggCCGACGCGAGAGGATCGACGCCGCTGCACGTCGTTTGCCGGAGATACGATTTCCACAGCGATACGCATAGAGATCTCAATGGTCTGATAACGGGCGTCTGCGGAAAGCGGATCGTCGAGatgctgctgagaaaaggtGCCGATCCGAACGCGTCCGACCGGGATGGTGTGACGCCTCTGCACATCGCTTGTCAGCGAGTCTGGAAAGGCTGCGGCTTCGTCGAGATATCGTTCGAGGTCTGCGACGAATTAAATCAGCCGATGCAGGTTAACGTCCGGGACAAGTCGGGCGACACACCGCTGCACGTGGCTCTGGAAGAACACTTTCACATCAAGACGGCCAAATTGCTACTGGAAAAGGGCGCCGACCCGAACATAGCCAATGCAGAGAggtcgactcctctgcacgtttTCTGCAAGAGATACAGCGTCAGGGATGCCCCGATGATCGAGCTATTTTTCGCGCTCGACGAGGCCGTACAGGTCGTCGACGCACCGGGCAAGGAGGGTCGCACGCCTCTGCACTACGCCACGTCGCGAATCTCTCGCCGCGCattgAGATCTTATTTGCATTTAACGTATTCTGATACTCTGATCATAGGAAtactcgaacgtcgcaaagattttgaatgtgataattgcgagaagaaatttggaagtaaatccAATTTGGtgaaacaccaaaaaacagttcacgaggattgcaaagattacgtatgcgataagtgcgagaaaaaattcggaaaaaaatcgaatttgctttaccatcaaaggacagtccacgaaggtcgcagagattttgcttgcgacaagtgcgaaaagaaatttagacAAAAAGGTCATTTGCTtttccatcaaaagacagtacatgaatgTGTCAAAAACTACGCATGCTCTAATTGCGAAAGGAAATGTGGGAGTAAATCCgatttgttaaagcaccaaaggacagtccatgagggtcgcaaagattacgaatgcgcTAATTGCGAAAGGAAATGTGGGAGTAAATCCgatttgttaaagcaccaaaggacagtccacgaaggtcgcaaagattttgcatgcgacaattgcaaaaagaaatttggacaaaaacaatATTTGCTCATTCACCACatgacagtccatgaaggtcgtaaagatttcgcatgcgacaagtgcaagaagaaatttggaagtaaatcgaatttgctcaaacaccaaaggatagtccacgaaggtcgcaaagattacgtatgcgagagatgtgagaaaaaatttgcacgaaagtcctgtttgctcttgcacatgagaacagttcacgagggtcgcaaagatttctcTTGCGACaattgtgaaaagaaatttggaaaaaaatacgatttgctcaaacaccaaTTGACAGTACAttatggtcgcaaagattacttatgcgacaaatgtgagaagaaatttggacatagaTCGACTTTACTTttgcatcaaaagacagtccatcaAGGACGACAATCCCGAGGAAAACGAAGACGGCGAGAAGTATCACCCGGTGCAGGTCGACGTGGTGGACGACGTGGGAAACACGCCGTTGCACTTGACGCTGAAATTCGGCATGTTGGGCGTGAACAAAGTgaccgagctgctgctgagaaacggcgccgatccgaatctcgCCAACGCGGATGGATTCACGCCTCTGCACGTGATCGGCAGGAGGAAGAACGATGTAGCCGACTTGGCCAAAACGCTTTTCGAGACCTGCGCCGAAATCAATGGGTGGATATGGGTCGACGTCCGGGACAATcggggccggacaccgctgcgATTGGCCTTGGCGAATCTCTGGCCGAACTCGGTCGATCTACTCTTGGATCGGGGCGCTCGTTTGTCCACCTTAGTGTTCCCCAGCGCGAACGACTTCGCCGCGGGATTCCGATCGCAGCTATGGAAGAGGTTACAGAGTGGATCTGCAGGGCGCTCGGTCGATCGCGCGTCCCTATTCTGCACGTACGAATTGTTCGAGAAATCGGTGGACCTCGACGAACAATGGCACGAAATAAAAAGGAGGAGTTTTCGAGCAGTGCGAAAGAGGTCGAGATCACcccgagtctgtcgctctacgacctcGTCCGGCTGCGTCCCGAAAgggcaaaaaaattactgccGTGCAAGGACTACTGCAACGAGATCGTATTATCCTCGCCTCCGTGGTCGAATCTCCCTCAAGAGCTCGTTTTTCAAGCTGACGCGCAACGAGTTGTCGCGTTCGCTCTGCAACATGATCATGGACTTGCTTACGAATAA
Protein Sequence: MREKVVRQMQQNGKNITPEIHPLIRNWEGQKPDLGKIFRREEMDWLLKEYVEFVKIHSALETNLLTFAIECGYKDKPEIDKGGKPLLRRTTPVHHAARSNKSYVISDLFKIYDRFDANYVDEFGLTHFHVASQCGYDDLVMKFLELGQDPNCLLQKSVDPPLHLALAGSHKKVAETLLRNGADPNSTDDYGSTPLHVICQNDFDVEFIELFFKINDEKHRLVRLNSRDKFNDTPLHLALQFANEYSVEQVAKLLLERGADPNVANVDGLTPLHVICKRKNDAADLAKTLFRICDDRQVVHVDALDNSGRTPLQWAVANLRPQLVDVILDRGAELSSFVFPTPSQFHKGFVSLLEETWVHSKLRAVSGARAVVKRLERRGYKLNRRSVQTITNLFEKYGLFEKTDLDRLWHDDDEFTRIAKKIMMNPNKPDVDEGGKPLLRRTTLLHQAARSNKSYVIPDLCKIYDRFDVDYIDERGYTPFHVACTNGCYDVVKKFLELGQDPNCLLQKSVYPPLYMALYYKHQKVAELLLKNGANPNLANEYELTPLHAICSREHDDDLAELFFQMCDDNNHQLQVDARDKRDQTPLHLAVWKTNKKAAKLLLKRGADPNVANVNGQTPLHFISQREYDDDLAELFFQMCDDNNLPLQVDARDKRDQTPLHLAVYKSNKKAAKLLLKRGADPNIASEDGLTPLHTICMNKTDAADLAETLFQVCDDRHQMVQVDAKDKYGQTPLQWAVECLHPNLVDVLLDHGAKLSNFVFPSCLLNVEFVTHLDEASAHEKLKVVLDVRAVVQRLEKKGYKLKLQDMQTITTLFDKYGQCDKSTNLDPRWYEKEEFAKKSKHLMVSPSVSLYDLIRSAPAKADEILTNEDYYHKLVSSTQWSKLPEQFRIASVAQLCDIMARGLFYKRRALASLVKLTRNKLPILCYEMIIEPLMNKDFDPCCAARRVRSYYILYITTMAEECDHVGNTPLHLAIERGDSFLVELLLRNAANAILSIEQPVRIDARNKLGRTPLHLALGARDTASAESLLQRGADPNLADARGSTPLHVVCRRYDFHSDTHRDLNGLITGVCGKRIVEMLLRKGADPNASDRDGVTPLHIACQRVWKGCGFVEISFEVCDELNQPMQVNVRDKSGDTPLHVALEEHFHIKTAKLLLEKGADPNIANAERSTPLHVFCKRYSVRDAPMIELFFALDEAVQVVDAPGKEGRTPLHYATSRISRRALRSYLHLTYSDTLIIGILERRKDFECDNCEKKFGSKSNLVKHQKTVHEDCKDYVCDKCEKKFGKKSNLLYHQRTVHEGRRDFACDKCEKKFRQKGHLLFHQKTVHECVKNYACSNCERKCGSKSDLLKHQRTVHEGRKDYECANCERKCGSKSDLLKHQRTVHEGRKDFACDNCKKKFGQKQYLLIHHMTVHEGRKDFACDKCKKKFGSKSNLLKHQRIVHEGRKDYVCERCEKKFARKSCLLLHMRTVHEGRKDFSCDNCEKKFGKKYDLLKHQLTVHYGRKDYLCDKCEKKFGHRSTLLLHQKTVHQGRQSRGKRRRREVSPGAGRRGGRRGKHAVALDAEIRHVGREQSDRAAAEKRRRSESRQRGWIHASARDRQEEERCSRLGQNAFRDLRRNQWVDMGRRPGQSGPDTAAIGLGESLAELGRSTLGSGRSFVHLSVPQRERLRRGIPIAAMEEVTEWICRALGRSRVPILHVRIVREIGGPRRTMARNKKEEFSSSAKEVEITPSLSLYDLVRLRPERAKKLLPCKDYCNEIVLSSPPWSNLPQELVFQADAQRVVAFALQHDHGLAYE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -