Basic Information

Insect: Trichogramma brassicae
Gene Symbol: znf711
Assembly: GCA_902806795.1
Location: CADCXV010000678.1:36701-38407[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.00059 0.025 14.9 0.3 1 23 85 107 85 107 0.98

2 15 0.071 3 8.4 2.5 1 23 113 136 113 136 0.97

3 15 0.00054 0.023 15.1 3.2 2 23 175 196 174 196 0.97

4 15 0.22 9.6 6.8 5.9 3 23 204 225 202 225 0.92

5 15 0.0027 0.12 12.8 2.3 2 23 232 254 232 254 0.97

6 15 4.4e-05 0.0019 18.5 0.6 2 23 265 287 264 287 0.91

7 15 1.3e-05 0.00056 20.1 3.6 1 23 294 316 294 316 0.98

8 15 1.6e-06 7e-05 23.0 0.3 3 23 324 344 322 344 0.98

9 15 0.16 6.7 7.3 0.7 1 23 350 372 350 372 0.92

10 15 0.0025 0.11 12.9 0.5 1 23 378 401 378 401 0.90

11 15 5.9e-06 0.00025 21.2 1.4 1 23 407 429 407 429 0.99

12 15 0.00014 0.0059 16.9 0.7 1 23 435 457 435 457 0.96

13 15 1.6e-05 0.00068 19.9 0.5 1 23 463 486 463 486 0.94

14 15 1e-05 0.00042 20.5 9.8 1 23 492 514 492 514 0.98

15 15 5.5e-06 0.00023 21.3 5.2 1 23 520 542 520 542 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.00059	0.025	14.9	0.3	1	23	85	107	85	107	0.98
2	15	0.071	3	8.4	2.5	1	23	113	136	113	136	0.97
3	15	0.00054	0.023	15.1	3.2	2	23	175	196	174	196	0.97
4	15	0.22	9.6	6.8	5.9	3	23	204	225	202	225	0.92
5	15	0.0027	0.12	12.8	2.3	2	23	232	254	232	254	0.97
6	15	4.4e-05	0.0019	18.5	0.6	2	23	265	287	264	287	0.91
7	15	1.3e-05	0.00056	20.1	3.6	1	23	294	316	294	316	0.98
8	15	1.6e-06	7e-05	23.0	0.3	3	23	324	344	322	344	0.98
9	15	0.16	6.7	7.3	0.7	1	23	350	372	350	372	0.92
10	15	0.0025	0.11	12.9	0.5	1	23	378	401	378	401	0.90
11	15	5.9e-06	0.00025	21.2	1.4	1	23	407	429	407	429	0.99
12	15	0.00014	0.0059	16.9	0.7	1	23	435	457	435	457	0.96
13	15	1.6e-05	0.00068	19.9	0.5	1	23	463	486	463	486	0.94
14	15	1e-05	0.00042	20.5	9.8	1	23	492	514	492	514	0.98
15	15	5.5e-06	0.00023	21.3	5.2	1	23	520	542	520	542	0.98

Sequence Information

Coding Sequence: ATGCTTCACGCGCTCGACGCCGaggacgcagcagcagcagcgagcgacgATCCGACCGTCGATCGCTGCGACCCGTTGCGCGCCGACGAGGCGATCATCGACTTGAACTGCATCGAGATCGGCGACTCGAATTCGAGCCAGAATTACTTTTACCAGCAGCAGGAGGAGATGCCGTCGGTCGAGCTGGCGAGTCTGGACGAGCTGCTGTCGAGCATGGACCGGCGCCTCGTGGAGCTGCGAAACAACGAGTACTTCAAGTGCGACCTGTGCGAGACCAAGTACGAGAAACTGAGCGAGCTCGAGGCGCACGCCAAGAGCCACGACCAGCCCGACAATTACGTCTGCCAGGTCTGCTTCAAGTCGTTCCACGTGCTGCGGATATTCAACAAGCACCTGCGCTCGGCCCATCCGGAGCTGCCGATCGAGCTGGACAAGGGCTCGAGGCCGAAGCCGGTGCTGGAGCGCGCCAAGAGGCAGCCGAGACGGCTCGAGTCGCCGCGAGGCTCCAAGAGCGCCGACTGGCAGTGCCACCTGTGCAAGCGCAAGTTCGTCTACCAGAGCATCCTCAAGCGTCACGTGCGCTCGCACACGAACGAGCGGCCCTTCGGCTGCAAGCTCTGCGAGCAAAGGTTCTTCCAGCGCAGCCACCTGAGCCAGCACTTTGTCCGCTGCCACACCAAGGGCAGCGGCAACCGGTGCGCCGACTGCGAGGCCAGCTTCGACACGAGGCAGGACTTTCTGCGCCACTACCGCTCCTGCCACGAGAAGCTCGAGCCGCTCAAGCACCTGCTCGAGTGCGACTTCTGCAAGAAGATCTTCTTCGACAAGTCGAGCTTGCGCCGCCACATCGACGCGATGCACGTCCAGCTGCAGCCCCGCTACTCCTGCGAGATCtgcgacaaaaaattcaagctcgAGTGCAATCTCCAGAATCACATGTACACCCACACCGAGGAGAAGATGTTCGGCTGCCCGATCTGCGGCCGCAAGTTCAGCCAGAAGAGCGTGCTACAGGCCCACGCGAGGCGACACACCGACGACAAGCCCTTCCAGTGCGAGGTCTGCGGCTTGCGATTCTTGGAAAAGCTCAAGTTCATCGGGCACACGAGGCGTCACACGAACGAGCGACCCTTCGAGTGCGGCCTCTGCGCCAAGACTTTCGCCCTGAAGGAGACCCTGCGCCGACACGAGCACGCCGTGCACTACGCCAAGCCGAGCTACCAGTGCGAGATCTGCGCCAAGATGTTCAAGCAGCTCGTCCACCTCAACGTGCACAAGCGCGTCCACAGCGACGAGAGGCCCTTCCAGTGCACCGTCTGCAAGGCCAGCTTCAAGTATCGAGCTCTGCTCAAAAATCACGAGGACGTACACAAGAACGTGCGCCGCTACGAGTGCTTCGACTGCCGAGCCACCTTCGTGCGCAAGAGCAATCTGAGGATGCACATCTCGGGCATGCACACCAAGGAGCGACCCTTCCACTGCACCCACTGCGACAAGAAGTTCAAGCAGAAGAGCCACTTGAACGGACACCTGAGGACCCACACCAAGGCTCTGCCTTTCAGTTGCGACATATGCGGTCATCGCTGCAACAGACGCGATAATTTGAATAAGCACATCAAGACTCACGATATAACGAGGATAGTCAAGAGAAGAGCCAAAAAGAATACACCGTCGAGCGAAAATTTGATCAAGTTGTACGGTCAGTGA
Protein Sequence: MLHALDAEDAAAAASDDPTVDRCDPLRADEAIIDLNCIEIGDSNSSQNYFYQQQEEMPSVELASLDELLSSMDRRLVELRNNEYFKCDLCETKYEKLSELEAHAKSHDQPDNYVCQVCFKSFHVLRIFNKHLRSAHPELPIELDKGSRPKPVLERAKRQPRRLESPRGSKSADWQCHLCKRKFVYQSILKRHVRSHTNERPFGCKLCEQRFFQRSHLSQHFVRCHTKGSGNRCADCEASFDTRQDFLRHYRSCHEKLEPLKHLLECDFCKKIFFDKSSLRRHIDAMHVQLQPRYSCEICDKKFKLECNLQNHMYTHTEEKMFGCPICGRKFSQKSVLQAHARRHTDDKPFQCEVCGLRFLEKLKFIGHTRRHTNERPFECGLCAKTFALKETLRRHEHAVHYAKPSYQCEICAKMFKQLVHLNVHKRVHSDERPFQCTVCKASFKYRALLKNHEDVHKNVRRYECFDCRATFVRKSNLRMHISGMHTKERPFHCTHCDKKFKQKSHLNGHLRTHTKALPFSCDICGHRCNRRDNLNKHIKTHDITRIVKRRAKKNTPSSENLIKLYGQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -