Basic Information

Insect: Trichogramma brassicae
Gene Symbol: FPV246
Assembly: GCA_902806795.1
Location: CADCXV010000624.1:49802-98594[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 0.019 0.79 10.2 0.9 1 23 877 900 877 900 0.97

2 19 1.3e-06 5.5e-05 23.3 0.8 1 23 906 929 906 929 0.96

3 19 6e-05 0.0026 18.1 0.8 1 23 935 958 935 958 0.97

4 19 0.00062 0.026 14.9 1.4 3 23 966 987 964 987 0.97

5 19 0.0015 0.063 13.7 0.2 3 23 995 1016 994 1016 0.97

6 19 0.0052 0.22 12.0 1.5 1 23 1022 1045 1022 1045 0.96

7 19 8.6e-06 0.00037 20.7 1.8 1 23 1051 1074 1051 1074 0.98

8 19 0.0019 0.082 13.3 1.4 1 21 1080 1100 1080 1101 0.95

9 19 0.0036 0.15 12.5 2.3 1 23 1112 1135 1112 1135 0.96

10 19 0.56 24 5.6 0.9 1 23 1161 1184 1161 1184 0.84

11 19 6.7e-05 0.0029 17.9 2.0 1 23 1190 1213 1190 1213 0.97

12 19 1.9e-05 0.00081 19.6 1.2 1 23 1219 1242 1219 1242 0.97

13 19 1.4e-05 0.0006 20.0 2.2 1 23 1248 1271 1248 1271 0.97

14 19 6.8e-05 0.0029 17.9 0.5 1 23 1277 1300 1277 1300 0.97

15 19 0.00026 0.011 16.1 0.8 3 23 1308 1329 1306 1329 0.97

16 19 0.00028 0.012 16.0 0.6 1 23 1335 1358 1335 1358 0.95

17 19 4.6e-05 0.002 18.4 0.2 1 23 1364 1387 1364 1387 0.98

18 19 0.00035 0.015 15.7 1.4 1 23 1393 1416 1393 1416 0.97

19 19 0.0053 0.23 11.9 2.0 1 22 1422 1443 1422 1443 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	0.019	0.79	10.2	0.9	1	23	877	900	877	900	0.97
2	19	1.3e-06	5.5e-05	23.3	0.8	1	23	906	929	906	929	0.96
3	19	6e-05	0.0026	18.1	0.8	1	23	935	958	935	958	0.97
4	19	0.00062	0.026	14.9	1.4	3	23	966	987	964	987	0.97
5	19	0.0015	0.063	13.7	0.2	3	23	995	1016	994	1016	0.97
6	19	0.0052	0.22	12.0	1.5	1	23	1022	1045	1022	1045	0.96
7	19	8.6e-06	0.00037	20.7	1.8	1	23	1051	1074	1051	1074	0.98
8	19	0.0019	0.082	13.3	1.4	1	21	1080	1100	1080	1101	0.95
9	19	0.0036	0.15	12.5	2.3	1	23	1112	1135	1112	1135	0.96
10	19	0.56	24	5.6	0.9	1	23	1161	1184	1161	1184	0.84
11	19	6.7e-05	0.0029	17.9	2.0	1	23	1190	1213	1190	1213	0.97
12	19	1.9e-05	0.00081	19.6	1.2	1	23	1219	1242	1219	1242	0.97
13	19	1.4e-05	0.0006	20.0	2.2	1	23	1248	1271	1248	1271	0.97
14	19	6.8e-05	0.0029	17.9	0.5	1	23	1277	1300	1277	1300	0.97
15	19	0.00026	0.011	16.1	0.8	3	23	1308	1329	1306	1329	0.97
16	19	0.00028	0.012	16.0	0.6	1	23	1335	1358	1335	1358	0.95
17	19	4.6e-05	0.002	18.4	0.2	1	23	1364	1387	1364	1387	0.98
18	19	0.00035	0.015	15.7	1.4	1	23	1393	1416	1393	1416	0.97
19	19	0.0053	0.23	11.9	2.0	1	22	1422	1443	1422	1443	0.96

Sequence Information

Coding Sequence: ATGTTTCCAAAGTTTTCCAAAACAGGATATTATAATAACTATACGATCAATTACATTCTGTTTGGGTGCCTACAGATATCAATTCTGGAATTTGATCTACTTGATCTACGTTACTTTCAATTTGTGCTGAAGCACTTTGGTCaagacgacaaaaaaatattggagTTCATTATGGATACGAAATGGGAGGGAAACCTCCGTGGACACAAAGTCTGGGAATGTTTGAAggtgaaacattttttgctgATACCGAGAATCCATTGGAACGATCTGAAGCTAAGAGCTCAAAAGCTCCTTCGTCCTAAGAGAGAGCTCAGGGCGTGGATCGCCTTGACTGGTTTGAAGAGATCCAGGTGGATCGACGAGACTCGTCCTGAGTGGCCCTCTTTCAATATTTCGATGCGGTACCTGCGGtattatttgttaaataaaggCGATAAGGGAAGGCTAAACACTCCGTATGATATCGAGGAGAACCCCGAGTtgtttttcattgataaataTACGAACCGAACCCCCGATGGTGCGCAACCTGACCCCGATGGAGCCGACGTTCTACGAGGAGCAGCCCCAGCTCTACGGCGGCCGCATGTCCAACGGCGGCGGCCTCGTGGGCGCCGCCATGAAGCGCACCAATCTCACGCTCGATCTCAATCGgcaccagcagcaccagcTTCATCACCAGTCCGGCGGCGGCAAGCGTCAAAAGCTCGGCCCGCTCACGCCCAATCTACTGAGCAACATCACTCTCAACTCGCCGGACATGTTCAAGATCGCCTCGCCCGAGTtcgagaagctgctgctgtcgcaGGGCATCACGGCGGACAATCTCAACGCGCTGAACGCGGGCGGCATCAACATCAACACGCCCACCTCGCAGATGTACAGCTTCGAGAACAAGTCCTTGGTGACGGAGGAGCAGGAGCACTACGCGCGCGGCTTCGTGGACGCCCTCGAGGCGCTGCATCACAGCGACAGCTCGCAGGAGACGGGCGCCATGCACGGCGCGACCTACACGAACCTCGAGCCGCCCGGCTCGGTGCAGAGCAccgagtcgtcgtcgctgctgggCGGTGGCTCGTCGGGCACCAGCGGCTGCGGCAACAACGGCCTGGCCGTGTCGATCAAGGACGAGCCCCAGACCGTGCCGAGCGTGAACTCGTCGCCGCCCGTGTCGCCCATCGACATGGAGAACCAGGAGAGGATCAAGCTCGAGCGCAAGAGGCAGAGGAATCGCGTGGCCGCGTCCAAGTGTCGCAAACGCAAGCTCGAGCGCATATCCAAGCTCGAGGAGCGCGTCAAGGTGTTGAAGGGCGAGAACACGGAGCTGAGCGCGGCCCTGCTCAAGCTCCGGGAGACGGTGAGCAAGCTGAAGGAGCAAGTGATCTCGCATCTGCACTCGGGCTGCCACCTGCCGACGCACAACGGCGGCATCGGCGGTCTCGGCCAACTGGGACAGCTGGGCACGGTCGTCTGAGATTGGGAGCGCGAGGAGGcggtcgacgacgacgacgaagacgactgTCTGCACCTCATCGAGCAATTTATACTGAAGCAAGAGGAGCTGGAGGAGCAACACGAGGATATCAGCTGACCGGTTGCTGCTGCGAATCGAGATACCACGACGACGGAGACAACGGGGCAGCggcgacaacaacaacggcgtGTCGTGCTCGTGCGTGCTGTCGCCTATACCATATACAACTCACATCTTTCTTGTCCTTAACGAGCGTGGCTATTTTTAGTATTCGGCGCCGCGCGCACTTCGTTCAATTCGCCGAGCAGTATAGcgtactcacacacacacacacacacacacacctcccaaacacCCGGAGTCGTGCACCGTTGTTGTTGGAGGAGGAAAACGACACGTCGCTGCCATATATACTACGATTGCTGTGTTTTGAACCAATGAAATATTATGGCTCGCGCGACGCGCGAAGATGCAACAGTTGTCGACGCTGTGCATATATAGGTGAATCACGCTCCAACTATTTGTCggtatggaaaaacaaaactCCGCGCCGCGCGGCCTCGAGAGCGCGTGTATCGTTGCACAGGCTGCTGCTAATACAAAtaaaagcgaagaaaaaaaaGACGATTTCAGCGAGTATAGTAGCAACAGCCAAGGTCGCGCGTCGATTTGCGCAAAAGTGTCATcccgcgtgtgtatacgatgtatacatgtataggaAAAAATGCGCAAGGACGCGTGCGTACGATGCAGAGAGAGATGCTCTcgagtgtttTAACGCACAGAGATTTTCCATGCCGTCGCCTCGGATCAGCGTCGCGAGCGTTTATCCTACCCTTcgatcgccgccgccaccgccgcgacGCGCCTGCCtggataattattatattatgcataaTATTAAACGATCGAGTCGAGTTGTTCCCCTGTATACACTCCCTTCGCGGCAGTTTCGGAGATATCGAATAACATTGCGCCCCGTGTATAATGTACGACGAGATGAAATTCCGACACCGATGCCAAGTTGGAATTCTAAGCTGATTCCGATTCGAAAGGCAATGTATAAACtacacgataagtgcgaaaagaaatttggacagaaGCATCAATTGCTCACCTACCAAAAGAAAGTACGcgaagatcgcaaagattatgcatgcgacaaatgcgagaagaaatttagaatTAAATCGATTTTGCTTTACCACCAAAACACTGTTCACGAGGGTCACAAatattatgcatgcgacaattgcgataagaaattcggaaatcaaagcaatttgacTAGACACCGAAAAATtgtgcacgaaggtcgcaaagattacgcatgcgacaattgcgagaagaaattcggagaTAAACAACAATTGTttagacaccaaaagatagtccacgaaaatcgcaaagattacggatgcAACAAGTGCCAGAAGAAATTCGCACTCAATACGTATTTGcttagacaccaaaaaacaatccacgaaggtcgcaaagataacgcatgcgataagtgcgagctGAAATTTGGAGGAAAATCGGCattgatcagacaccaaaggtcagtccacgaaggtcggaaagatttcgcatgtgacaaatgcgagaagaaatttacagaaaaaaaaaatttgctcttCCATCTAAacacagtccacgaaggtcgcaaagattacacttgtgacaaatgtgagaagaaattcggatataaatcagatttgctgaagcaccaaaggtcagtccatgaaggtcgcaaagattatgcatgcgacaaatgcgagaagaaatttggactaaacTCGTATTTGCGCAGACACCAAATGcacaacaaaatattccacgaagttttcaaagattacttatgtgaaatttgcGCGAAGAGATTCGGACATAAGTGTACTTTGCTctggcacataaaaacagtacacaagtgcgaaaagaaatttggacaaaagcaTCAATTGCTCACCTACCAAAAGAAAGTACGcgaagatcgcaaagattatgcatgcgacaaatgcgagaagaaatttagaattaaatcaattttgctttttcaccAAAACACTGTTCACGAGGGttacaaaaattacgcatgcgacaactGCGATAAGAAATTCGGAATTCAAAGCCATTTGACTAGACACCGAAAAATggtgcacgaaggtcgcaaagattacgcatgcgacaattgcgagaagaaatttggagaaaaatcgaaactgactagacaccaaaggacaatCCATGGGGATCATAAAGATCacgaatgcgacaagtgcgagagaaaattcggacaaaaatcagatttgatcagacaccaaaaaacagtacacgaaggtcgcaaagattacgcatgcgacaattgcgagaagaaattcggagaTAAACAACAATTGCttagacaccaaaagatagtccatgaaaatcgcaaagattacggatgcgacaggtgcgaaaagaaattcggatataaatcagatttgttgaagcaccaaaggtcagtccatgaaggtcgcaaagattatgcatgcgacaaatgcgagaagaaatttggactaaacTCGTATTTGCGCAGACATCAAATGGGAGTACATAAAGGGTACAAAATTTATGTATGCgttaagtgcgagaagaaatttggggatccaAGCGCTTTGatcaaacacaaaaaaacagtccatgaaggctgcaaagactacgcatgcgacaagtgcgagaagaaatttggatttaaatttaatttgctcaGCCAcctaaagacagtccatgaaaaCCGGAAAGATTAtgcttgtgacaagtgtgagaaaaaatttggacataaaaaGCTTTTGCTCTACCATCAAAAGACATACATAGCAGTGCGCGCGACAAGTATATTATATGGTGTGTACCGCGCGTTGTGTATTATGCAGTCGCGGAGGACCTTCGGATCTCGGCGAGTTCTCACGTccgcgcgacgcgacgcgcgcgaatcgtgtGTTTAccaaataaaagtaaagtatTCACATGATCGTTCGCCGCTACATATAGCTCTGGACAGCGACCGGAAAGAAGTGTTCGAATTACTGCTAAGAGGAGGTGCCAGTCCAAATTTCGCCAACGAGGATGGAACAACACCTCTATTCGTGATGTGCGAGATGGAAGACGATCGTGATGATTTGGTTAAGATGTTGTTCGAGATCAGTGACGAGAAACATCTACAAGTGCAGGTCAACGTCCAGGACAAGTTCGGCTGCACACCATTGCACTCGGCTGTAGCAAATGGCAACATTGAAATTGCCAAACTGTTGCTGcaaagaggcgccgatccgaacttggCCAATAATGCAAGAGAGACAGCTCTGCACCTTTTGGACCTGGTAGAAGATGACGATCCTGACGTGGTGGAGATGATATTCGAGGCCTGCCACGATAAGCATCGACCGGTTCAAATCGATGCCCAAAACTTGGATGGCGACacgccgttgcacttggctctgattGACAGTAACGAGGTGGTGATGAAATCGCTGCTCAAACGAGGTGCCAACCCAAATTTGGCCAACATCAAGGGACATACTCCTCTGCACGTTCTTTGCATGGATAACTACCATGACTTCAATGGAGCGGTGAAGATATATTTCGATATTTGCGATACATATAATCGGCCGGTGGTGGTAGATGCAAAGGATAACGAGGGCCTCACTCCgcttcaatgggccgtggcgaatttCTTGTTCGTTGCGGTCGATGCAATCTTGGATCACGGTGCCGATCTGTCGAACTTCGTTTTCCCCAACGAGAGCTGCTTTGGCAAGGAATTGGAAATGATCTCAAGAGACGATTGCTTTATAACTTTTGTGGCTACTAAATTGAGAAATGCTACTCAACTTCTGCCCGTTATCAATCGACTCGAGAAAgcaggatacgagctggaccgGGACGACGTGCTGACGgttgtgaaatttttcgtcaagtACGAAGTGTTCGAGAAGTCGCGGGATCTCGAAGAATACAATTGgttcgacgacgaggagttttTGGCCATGTCGAGAAACATAATGGTAAAACCGGACTTGTCTTTCTACGACGCGATGCAGTTACCATCCAGACAGGCGGAGACGCTACTCGCGCTTACGCGCTACTGCGAGGTGGCGAATTCCTTCGAGGGTTTTCGCGAGCTCCCCGAAAGGCAGCAAATGGCCTGCGTcatgcatctgtgcgagaaagcGACGAAACGATTTTTCCAGCGATGGGCATTGGATCCTTTCTGGAAACTAATTCACTATCGACTGCCAATCGAATGCTGTGATATGATTCTGGATAATCTGAAAAACGaagatttatgtaatatttttttggcgGGT
Protein Sequence: MFPKFSKTGYYNNYTINYILFGCLQISILEFDLLDLRYFQFVLKHFGQDDKKILEFIMDTKWEGNLRGHKVWECLKVKHFLLIPRIHWNDLKLRAQKLLRPKRELRAWIALTGLKRSRWIDETRPEWPSFNISMRYLRYYLLNKGDKGRLNTPYDIEENPELFFIDKYTNRTPDGAQPDPDGADVLRGAAPALRRPHVQRRRPRGRRHEAHQSHARSQSAPAAPASSPVRRRQASKARPAHAQSTEQHHSQLAGHVQDRLARVREAAAVAGHHGGQSQRAERGRHQHQHAHLADVQLREQVLGDGGAGALRARLRGRPRGAASQRQLAGDGRHARRDLHEPRAARLGAEHRVVVAAGRWLVGHQRLRQQRPGRVDQGRAPDRAERELVAARVAHRHGEPGEDQARAQEAEESRGRVQVSQTQARAHIQARGARQGVEGREHGAERGPAQAPGDGEQAEGASDLASALGLPPADAQRRHRRSRPTGTAGHGRLRLGARGGGRRRRRRRLSAPHRAIYTEARGAGGATRGYQLTGCCCESRYHDDGDNGAAATTTTACRARACCRLYHIQLTSFLSLTSVAIFSIRRRAHFVQFAEQYSVLTHTHTHTHLPNTRSRAPLLLEEENDTSLPYILRLLCFEPMKYYGSRDARRCNSCRRCAYIGESRSNYLSVWKNKTPRRAASRARVSLHRLLLIQIKAKKKKTISASIVATAKVARRFAQKCHPACVYDVYMYRKKCARTRAYDAERDALECFNAQRFSMPSPRISVASVYPTLRSPPPPPRRACLDNYYIMHNIKRSSRVVPLYTLPSRQFRRYRITLRPVYNVRRDEIPTPMPSWNSKLIPIRKAMYKLHDKCEKKFGQKHQLLTYQKKVREDRKDYACDKCEKKFRIKSILLYHQNTVHEGHKYYACDNCDKKFGNQSNLTRHRKIVHEGRKDYACDNCEKKFGDKQQLFRHQKIVHENRKDYGCNKCQKKFALNTYLLRHQKTIHEGRKDNACDKCELKFGGKSALIRHQRSVHEGRKDFACDKCEKKFTEKKNLLFHLNTVHEGRKDYTCDKCEKKFGYKSDLLKHQRSVHEGRKDYACDKCEKKFGLNSYLRRHQMHNKIFHEVFKDYLCEICAKRFGHKCTLLWHIKTVHKCEKKFGQKHQLLTYQKKVREDRKDYACDKCEKKFRIKSILLFHQNTVHEGYKNYACDNCDKKFGIQSHLTRHRKMVHEGRKDYACDNCEKKFGEKSKLTRHQRTIHGDHKDHECDKCERKFGQKSDLIRHQKTVHEGRKDYACDNCEKKFGDKQQLLRHQKIVHENRKDYGCDRCEKKFGYKSDLLKHQRSVHEGRKDYACDKCEKKFGLNSYLRRHQMGVHKGYKIYVCVKCEKKFGDPSALIKHKKTVHEGCKDYACDKCEKKFGFKFNLLSHLKTVHENRKDYACDKCEKKFGHKKLLLYHQKTYIAVRATSILYGVYRALCIMQSRRTFGSRRVLTSARRDARESCVYQIKVKYSHDRSPLHIALDSDRKEVFELLLRGGASPNFANEDGTTPLFVMCEMEDDRDDLVKMLFEISDEKHLQVQVNVQDKFGCTPLHSAVANGNIEIAKLLLQRGADPNLANNARETALHLLDLVEDDDPDVVEMIFEACHDKHRPVQIDAQNLDGDTPLHLALIDSNEVVMKSLLKRGANPNLANIKGHTPLHVLCMDNYHDFNGAVKIYFDICDTYNRPVVVDAKDNEGLTPLQWAVANFLFVAVDAILDHGADLSNFVFPNESCFGKELEMISRDDCFITFVATKLRNATQLLPVINRLEKAGYELDRDDVLTVVKFFVKYEVFEKSRDLEEYNWFDDEEFLAMSRNIMVKPDLSFYDAMQLPSRQAETLLALTRYCEVANSFEGFRELPERQQMACVMHLCEKATKRFFQRWALDPFWKLIHYRLPIECCDMILDNLKNEDLCNIFLAG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -