Basic Information

Insect: Trichogramma brassicae
Gene Symbol: eIF2beta
Assembly: GCA_902806795.1
Location: CADCXV010000917.1:122151-145256[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 29 6.7e-06 0.00029 21.1 0.8 1 23 214 237 214 237 0.96

2 29 5.9e-05 0.0025 18.1 1.5 1 23 243 266 243 266 0.98

3 29 7.7e-06 0.00033 20.9 2.5 1 23 272 295 272 295 0.97

4 29 0.00037 0.016 15.6 1.6 1 23 301 324 301 324 0.95

5 29 0.0043 0.18 12.2 2.3 1 23 328 351 328 351 0.95

6 29 0.035 1.5 9.4 0.6 5 22 353 370 352 370 0.94

7 29 0.00023 0.0099 16.2 1.6 1 23 378 401 378 401 0.97

8 29 0.0019 0.079 13.4 1.9 1 23 407 430 407 430 0.97

9 29 0.0047 0.2 12.1 1.0 1 23 436 459 436 459 0.97

10 29 6.4e-06 0.00027 21.1 0.8 1 23 465 488 465 488 0.93

11 29 0.00064 0.027 14.8 2.3 1 23 494 517 494 517 0.97

12 29 6.7e-06 0.00029 21.1 0.8 1 23 523 546 523 546 0.96

13 29 5.9e-05 0.0025 18.1 1.5 1 23 552 575 552 575 0.98

14 29 7.7e-06 0.00033 20.9 2.5 1 23 581 604 581 604 0.97

15 29 0.00037 0.016 15.6 1.6 1 23 610 633 610 633 0.95

16 29 0.0024 0.1 13.0 2.7 1 23 637 660 637 660 0.95

17 29 0.0051 0.22 12.0 1.4 5 23 662 681 661 681 0.96

18 29 0.017 0.73 10.3 2.9 1 23 687 710 687 710 0.98

19 29 1.1e-05 0.00045 20.4 0.9 1 23 716 739 716 739 0.98

20 29 7.8e-06 0.00033 20.9 2.4 1 23 745 768 745 768 0.98

21 29 0.011 0.46 11.0 4.2 1 23 774 797 774 797 0.96

22 29 0.0017 0.072 13.5 0.8 1 23 803 826 803 826 0.97

23 29 1.6e-05 0.00066 19.9 1.5 1 23 832 855 832 855 0.96

24 29 2.1e-05 0.00088 19.5 0.5 1 23 861 884 861 884 0.98

25 29 0.00015 0.0066 16.8 1.0 1 23 890 913 890 913 0.97

26 29 9.4e-06 0.0004 20.6 0.6 1 23 919 942 919 942 0.96

27 29 5.5e-06 0.00023 21.3 1.7 1 23 948 971 948 971 0.98

28 29 2e-05 0.00087 19.5 2.8 1 23 977 1000 977 1000 0.97

29 29 0.021 0.91 10.0 0.3 3 23 1008 1029 1006 1029 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	29	6.7e-06	0.00029	21.1	0.8	1	23	214	237	214	237	0.96
2	29	5.9e-05	0.0025	18.1	1.5	1	23	243	266	243	266	0.98
3	29	7.7e-06	0.00033	20.9	2.5	1	23	272	295	272	295	0.97
4	29	0.00037	0.016	15.6	1.6	1	23	301	324	301	324	0.95
5	29	0.0043	0.18	12.2	2.3	1	23	328	351	328	351	0.95
6	29	0.035	1.5	9.4	0.6	5	22	353	370	352	370	0.94
7	29	0.00023	0.0099	16.2	1.6	1	23	378	401	378	401	0.97
8	29	0.0019	0.079	13.4	1.9	1	23	407	430	407	430	0.97
9	29	0.0047	0.2	12.1	1.0	1	23	436	459	436	459	0.97
10	29	6.4e-06	0.00027	21.1	0.8	1	23	465	488	465	488	0.93
11	29	0.00064	0.027	14.8	2.3	1	23	494	517	494	517	0.97
12	29	6.7e-06	0.00029	21.1	0.8	1	23	523	546	523	546	0.96
13	29	5.9e-05	0.0025	18.1	1.5	1	23	552	575	552	575	0.98
14	29	7.7e-06	0.00033	20.9	2.5	1	23	581	604	581	604	0.97
15	29	0.00037	0.016	15.6	1.6	1	23	610	633	610	633	0.95
16	29	0.0024	0.1	13.0	2.7	1	23	637	660	637	660	0.95
17	29	0.0051	0.22	12.0	1.4	5	23	662	681	661	681	0.96
18	29	0.017	0.73	10.3	2.9	1	23	687	710	687	710	0.98
19	29	1.1e-05	0.00045	20.4	0.9	1	23	716	739	716	739	0.98
20	29	7.8e-06	0.00033	20.9	2.4	1	23	745	768	745	768	0.98
21	29	0.011	0.46	11.0	4.2	1	23	774	797	774	797	0.96
22	29	0.0017	0.072	13.5	0.8	1	23	803	826	803	826	0.97
23	29	1.6e-05	0.00066	19.9	1.5	1	23	832	855	832	855	0.96
24	29	2.1e-05	0.00088	19.5	0.5	1	23	861	884	861	884	0.98
25	29	0.00015	0.0066	16.8	1.0	1	23	890	913	890	913	0.97
26	29	9.4e-06	0.0004	20.6	0.6	1	23	919	942	919	942	0.96
27	29	5.5e-06	0.00023	21.3	1.7	1	23	948	971	948	971	0.98
28	29	2e-05	0.00087	19.5	2.8	1	23	977	1000	977	1000	0.97
29	29	0.021	0.91	10.0	0.3	3	23	1008	1029	1006	1029	0.97

Sequence Information

Coding Sequence: atGACGGAAGAGGACGCGATGTTTGATCCCAAACtcacaaaaaagaagaagaagaagaagaccgGCTTCGACTTGGATGCAGCCATCGCTGACAGTGGAAACGTTGGCGTGGATGCCAGCGAAAACTCCAAGGCAGAAAAAGAGAACATGGAGGTGGATCCAGCTCCAATCGAGGACGACGAAGCGTTAGACCTGGAAAGctttggaaaaaagaagaagaaaaagaaaaagttcaaCTTGGAGGAGCTGGAAGCTGCTTTgccagaaacaaaaaaagagGAAAATAACGATAATCAAATTGAGGAAAACGAAGTTGATGAAATAGACTTGAATCTTGACTttacgaaagagaaaaagaagaaaaagaagaagaaggattTAGAAGAATTAATTGAAGATAGAAAGGAGAATGAAAACAATGAGAATGAGGAGCCAAGTCAGTGGGTAGGATCGGACAGAGATTACACATATGACGAATTACTTGCCCGAGTGTTCAACATTATGAAGGAAAAGAACCCTGACATGGTCGCTGGCAAGAAACAGAAGTTTGTCATGAGACCACCTCAGGTTGTGCGTATTGGAACAAAGAAAACTTCCTTCTCAAACTTCACAGAGAcggttcacgaaggtcgcaaagattacgcatgcaacaattgcgaaaagaaatacGGGAATCAAAGTAATTTGAGAAAACACCAACAAATAGTCCACGAAgttcgcaaagatttttcatgcgacACGTGTGACAAGAGATTTGGACTAAAAACAGATTTGTTTCGGCACCAAAATACAGTTCATGGAGGTCGaagagattacgcatgcgacaagtgcgagaagaaatttggaaccaAGTACcatttgctcagacaccaaaggatagtccatgatggtcgcaaagatttcgcatgcaacaaatgcgaaaagaagtttggacaaaaagtgcaattgcttaaacacaaaaaaaacgtacatgatgattattacttatgtgaaatttgcgcgaagagatttggacACAAATGCAGTTTGCTCTGGCACATAAATAGAGTACAtgataagtgcgaaaagaaatttggacaacaGCATCAATTGCTCACCCACCAAAAGACGGTAaatgaaggtcacaaagatttcgcatgtgacaaatgcgagagaaaatttggatttaaaaCGGATTTGTTTCGGCACCAAaatacagtacacgaaggtcacaaagatttcgcatgtgacaaatgcgagaagaaatttggattgaAATGTAATTTGCTCATTCACctaaagacagttcacgaaaaccggaaagatttcgcatgtgacaagtgtgaacaGAAATTTGGGTATAAACGGAATATGTTATTGCATCAACAGACAATACACGaaagtcgtaaagattatgcatgcgacaactgcgagaagaaatttggacgaaaatcgaatttacgCAGACACCAAACGGCAGTACATAAAAGGTAcaaaaattatgcatgcgacaattgcaaGAGCAAATTTGCACGAAAACATCAATTGCTCATACATCAAAAGAcggttcacgaaggtcgcaaagattacgcatgcaacaattgcgaaaagaaatacGGGAATCAAAGTAATTTGAGAAAACACCAACAAATAGTCCACGAAgttcgcaaagatttttcatgcgacACGTGTGACAAGAGATTTGGACTAAAAACAGATTTGTTTCGGCACCAAAATACAGTTCATGGAGGTCGaagagattacgcatgcgacaagtgcgagaagaaatttggaaccaAGTACcatttgctcagacaccaaaggatagtccatgatggtcgcaaagatttcgcatgcaacaaatgcgaaaagaagtttggacaaaaagtgcaattgcttaaacacaaaaaaaacgtacatgatgattattacttatgtgaaatttgcgcgaagagatttggacACAAATGCAGTTTGCTCTGGCACATGAATAGAGTACAtgataagtgcgaaaagaaatttggacaacaGCATCAATTGCTCACCCATCAAAAGACGGTAcatgaaagtcgcaaagattacccatgcaataaatgcgagagaaaatttggatgTAAAAAGGATTTGTTTTGGCACCAAaatacagtacacgaaggtcataaagatttttcatgcgacATGTGTggcaagaaatttggactaaaaacagatttgttgaagcaccaaaggacagtacacgaaggtcgcaaagattacacatgcgacaagtgcgaaaagaaatttggtcaaaaatcgactttgtaCTCGCACCAGAGGACGATCCACGATGATCGCAAAGatcatgcatgcgacaaatgcgagaaaaaatttggattgaAATGTAATTTGCTCACCCACCTAAAGACAATACACGGAAaccggaaagatttcgcatgtgacaagtgtgaacaGAAATTTGCCTATAAACAGAATATGTTATTGCATCAacagacaatacacgaaggtcgtaaagattatgcatgcgacaaatgcgagaagaaatttggacgaaactCGTATTTACGCAGACACCAAACGTCAGTACATAAAGGGTACAAAAATTATGTATGCGttaagtgcgagaaaaaatttggggatcCAAGCACTTTGatcagacacaaaaaaacagtccatgatggccgcaaagattacgccTGTGAGCATTGCGAGCTGgtatttggagaaaaatcgaaattgaccAGACACCAAAGTACAGTCcatgatggtcgcaaagattacgcatgcgacaagtgcgagaaaaaatttggagaacaGAGTAATTTGAGAAAACACCAACAAATAGTCCACGAAGTTCGCAAGGATTatacatgcgacaagtgtgacaAGAGATTTGCACTAAAAACAGATTTGTTTCGGCACCAAAatacagttcatgaaggtcgaagagattacgcttgcgacaagtgcgagaagaaattcggacgtAAAGAGCATTTGTTTCtccaccaaagaacagtccacgaaggtcgcaaagattacggatgcgaaatatgcaaaaagaaatttggacaaaaatggattatgattcagcaccaaaggacagttcacgaaggttgTAAAGATCATGTATGCAAcatTTCCAAACaagtcgtgaaaaaaatcttggCTGATCGGCGTTCTAATAAGTGCAGTTATACTCGAACCAAAATGTTTCTCGCGAGACGATTATCCAGCGCGAATCTATTGACGAACCGGaggatgctgctgcagcagccgcTGCTAGGAAACGCGACGAGAGTCATGAAGAGCACGAAAGTGCGCGCGCCTCTGTTCTTCGACGCGAAGAGCATCACGTTCAATCCGTCGAAGAAGCAGTTGCTGTCGGCGGAGTACATGAAGCCGCGCATCACCCACAAGGGAAAGAGGAGACCCCAGAAAGTACAGGTGACCTGGGAGTGCGAGAAGTGCAATAGGCGCGATACCGACACCGTCTACAAGAGCCACTTCGAGAACGCCATGGTGTCGATCAGATGCGACGGCTGCCGCTCGCTGAATACCATTACATCAAAGCGGTCGTCAAAGACGTCAAGCTTGCCTAAAGCTCAATATTGGAATATTAATTGTGCCAACATGATTGTGTTTCACCTAATAACAATTTGTTTACACCTTCTATTCTCTGTCGTGGTTagtgctttattttttaaccagGCTCTCCGTAAATTTTTTAGCTTATCAACGATCAACGTGGAAAccattcaataa
Protein Sequence: MTEEDAMFDPKLTKKKKKKKTGFDLDAAIADSGNVGVDASENSKAEKENMEVDPAPIEDDEALDLESFGKKKKKKKKFNLEELEAALPETKKEENNDNQIEENEVDEIDLNLDFTKEKKKKKKKKDLEELIEDRKENENNENEEPSQWVGSDRDYTYDELLARVFNIMKEKNPDMVAGKKQKFVMRPPQVVRIGTKKTSFSNFTETVHEGRKDYACNNCEKKYGNQSNLRKHQQIVHEVRKDFSCDTCDKRFGLKTDLFRHQNTVHGGRRDYACDKCEKKFGTKYHLLRHQRIVHDGRKDFACNKCEKKFGQKVQLLKHKKNVHDDYYLCEICAKRFGHKCSLLWHINRVHDKCEKKFGQQHQLLTHQKTVNEGHKDFACDKCERKFGFKTDLFRHQNTVHEGHKDFACDKCEKKFGLKCNLLIHLKTVHENRKDFACDKCEQKFGYKRNMLLHQQTIHESRKDYACDNCEKKFGRKSNLRRHQTAVHKRYKNYACDNCKSKFARKHQLLIHQKTVHEGRKDYACNNCEKKYGNQSNLRKHQQIVHEVRKDFSCDTCDKRFGLKTDLFRHQNTVHGGRRDYACDKCEKKFGTKYHLLRHQRIVHDGRKDFACNKCEKKFGQKVQLLKHKKNVHDDYYLCEICAKRFGHKCSLLWHMNRVHDKCEKKFGQQHQLLTHQKTVHESRKDYPCNKCERKFGCKKDLFWHQNTVHEGHKDFSCDMCGKKFGLKTDLLKHQRTVHEGRKDYTCDKCEKKFGQKSTLYSHQRTIHDDRKDHACDKCEKKFGLKCNLLTHLKTIHGNRKDFACDKCEQKFAYKQNMLLHQQTIHEGRKDYACDKCEKKFGRNSYLRRHQTSVHKGYKNYVCVKCEKKFGDPSTLIRHKKTVHDGRKDYACEHCELVFGEKSKLTRHQSTVHDGRKDYACDKCEKKFGEQSNLRKHQQIVHEVRKDYTCDKCDKRFALKTDLFRHQNTVHEGRRDYACDKCEKKFGRKEHLFLHQRTVHEGRKDYGCEICKKKFGQKWIMIQHQRTVHEGCKDHVCNISKQVVKKILADRRSNKCSYTRTKMFLARRLSSANLLTNRRMLLQQPLLGNATRVMKSTKVRAPLFFDAKSITFNPSKKQLLSAEYMKPRITHKGKRRPQKVQVTWECEKCNRRDTDTVYKSHFENAMVSIRCDGCRSLNTITSKRSSKTSSLPKAQYWNINCANMIVFHLITICLHLLFSVVVSALFFNQALRKFFSLSTINVETIQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -