Tbra005119.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Trichogramma brassicae
Gene Symbol
CEPT1
Assembly
GCA_902806795.1
Location
CADCXV010000983.1:1843447-1881824[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 32 0.0067 0.29 11.6 0.5 1 23 1022 1045 1022 1045 0.96
2 32 4.5e-05 0.0019 18.5 0.7 1 23 1051 1074 1051 1074 0.97
3 32 0.26 11 6.6 0.3 1 23 1080 1103 1080 1103 0.95
4 32 2.2 96 3.7 0.2 13 23 1121 1132 1116 1132 0.88
5 32 0.00013 0.0056 17.0 1.1 1 23 1138 1161 1138 1161 0.97
6 32 2.4e-05 0.001 19.3 1.0 1 23 1167 1190 1167 1190 0.98
7 32 0.053 2.2 8.8 0.6 1 16 1196 1211 1196 1212 0.92
8 32 6.6e-06 0.00028 21.1 1.9 1 23 1225 1248 1225 1248 0.97
9 32 0.058 2.5 8.7 1.1 1 23 1254 1277 1254 1277 0.97
10 32 4.1e-05 0.0018 18.6 0.6 1 22 1283 1304 1283 1304 0.96
11 32 0.015 0.62 10.6 1.2 1 23 1312 1335 1312 1335 0.94
12 32 0.00017 0.0073 16.6 2.2 1 23 1341 1364 1341 1364 0.97
13 32 8.9e-06 0.00038 20.7 0.2 1 23 1370 1393 1370 1393 0.96
14 32 5.1e-05 0.0022 18.3 0.2 1 23 1399 1422 1399 1422 0.96
15 32 0.12 5 7.7 0.3 1 23 1428 1451 1428 1451 0.96
16 32 1.4e-05 0.00059 20.1 2.8 1 23 1457 1480 1457 1480 0.97
17 32 0.11 4.9 7.7 0.3 1 23 1486 1509 1486 1509 0.97
18 32 0.00016 0.0068 16.7 0.4 1 23 1515 1538 1515 1538 0.96
19 32 0.0015 0.063 13.7 5.7 1 23 1544 1567 1544 1567 0.98
20 32 2.3e-05 0.00097 19.4 0.2 1 23 1573 1596 1573 1596 0.97
21 32 0.089 3.8 8.1 0.6 1 23 1602 1625 1602 1625 0.96
22 32 0.00046 0.02 15.3 0.8 1 23 1631 1654 1631 1654 0.96
23 32 5.7e-05 0.0024 18.1 0.9 1 23 1673 1696 1673 1696 0.97
24 32 0.0002 0.0086 16.4 2.7 1 23 1702 1725 1702 1725 0.97
25 32 4e-05 0.0017 18.6 1.1 1 23 1731 1754 1731 1754 0.97
26 32 0.00057 0.024 15.0 1.6 1 23 1760 1783 1760 1783 0.96
27 32 4.6e-05 0.002 18.4 1.3 1 23 1789 1812 1789 1812 0.98
28 32 0.00015 0.0064 16.8 0.7 1 23 1818 1841 1818 1841 0.96
29 32 0.0043 0.18 12.2 1.6 1 23 1847 1870 1847 1870 0.98
30 32 0.00048 0.021 15.2 6.5 1 23 1876 1899 1876 1899 0.96
31 32 1.9e-05 0.00081 19.6 0.5 1 23 1905 1928 1905 1928 0.97
32 32 0.00011 0.0046 17.3 0.5 1 23 1934 1957 1934 1957 0.97

Sequence Information

Coding Sequence
ATGTCCGTAGCAAATAGCCTAACAAATCATTGGCAATGGGACGAGTTCGCGGTGAGCGCCATCATCGCTATTGGGGGCTGtctgttttcaaaaaatcgcgAGTCTCGTAAACATCACGatacgacaaaaaatataacaaactCGAGAGGGAAATATTGTCCCAGAGAAAATGTAAGGCGGTATCCTGGACTGACTGAAAACTGGAGCCGACTCATCGGTCCGGGCGACACCCCCACGCGCCAGGCTCGCAACAATCTGCTGTGGCTGTGGTTCACCTCGGCCATGGTCTATCACTCGCTCGTGGTGACGCCCGGGGGCAGACTCACCGAGAGCCGACACTGGAACGTCGCGCTCGCCGGTGCCTTCGAGATCGCCGTCTACGTCTTCATGCACTTCGCCGTCAAGCGAAAGCGCCGAGTTCAGCCGCTGGTAGCAGCCGTGGCCCTAGCCGGCGGCGCCGTCTTCTTGTTGGGATGCCTCGCGGCGACGCCCAAGGACACCTACGcaatattcaaaGTTGCCTTGGCCCATGTTGGAAAACTCGCCAACGTAGCGGTCTTCTACCTCTTACGCATGATGACCATAGAGATCTTCCCCACGGTCATGCGTGGCAGCGGTCTGGGATTGTGCATATTCTTCCAGATGTTGGGCGGATTCGCCACCACTGCACTCGGGACCAGCGCCAGAATCGAAACCTTCAGTAAAATCTTACACAGATCTTTTCGAAACCAATCAGGGAaattgattaggtatcaacgaCTTTTCCATGGaaaacaatcgaaaaaaaatcgaataaaagtTGTAGCAATTGAtgagacctttaatttgagccCAACCACGATCGATTACGTTAATTATTTaccgagaaaaatgcaaaaaacctctaaaatgaccattttctcaattgcatttattataaaccATTTCAGTTCAATCGGCATTTacaatacatcaaaatttaGtggctacaaagacgagcctgACTTTGATGAAAACGGCAAGCCAGTGTTGCGTCGCTCTACACCTCTACATCACGTGTCTGAATTATTGGGCGATCAAGGACTTGACGTGGCTcgtgagctttttaaaatttacgataGATTTGATGTAAATTACATCGACAAGTCTGGCCTCACACACCTCCATGTGGCCTGCGGGTATGGCTTTGAcaacgtcgtcgagaaatttcttgaGCTCGGACAGAACCCCAATTGCCCCGTAGACGTTAAAGGTAATTCACCTCAAAACTTTGGGGCAGTCTACACACAATGGATCAAATTATTGCCGATAAATAAGAGAGGCAATCGTGAAAACTCGGCGGACACGCTGTTCGAGATGAGGGGCAAAAAACATCAGCTAGTGCAAATCAATGCCCAAGACAAGCATGGTGCTACACCGCTACATTGCGCTGCGAACAGTAGAAACAAGAAAATAATCGAATTACTATTGAAAAACGGCGCAGATCCGAATCTGACCACCAAGTATAATACAATTACTCCCCTGCATGTTATTTGCTACAAAAAACGCGGCGAGGGCTTATTAGAgttattcttcaagatctgcCGCGAAATCAATCAGCCAGTCCGAGTCAATGCCCAGGACAATGTATCGTGTACACCATTACACTGGGCTTCGCAACACGACAAAAACAATAAGGTGGTCGAATTGTTGATCAGAAATGGTGCCAGTCCGTATTTGTGCAACTTTTACGGTGAGACACCTCTGCAGATTTGCCTTCGAAAAGGAGACGATGAATCGGTGAAGGCCATATTTAAGTTCAATGGCGAAGTTAATCGGCTATTTGCATTTTCAACATCGGTGTTGTTCGTCAACCGGCTGAGGTCGCACGAAACAACGATGCAATATGCTGTGCGGAATTTCAGGCCACATTTGGTcgatgtactcttggatcTTGGGGCTGATCTATCTGGCTTCGTCTTTCCCGCTACGAGCTCCTTGATAATTACGAGTGTAATTCATAAGTTAAGTAGTGCtatgatttcgaaaaatgttatAGCTCCGTTTAAAATGAATAGCTGCATCTTAAGCTTATATTTCCAGCAGAAAATCCAGATGAAATGCATCCTGCCCTTCAACAAGGATAAAATCCTGTCGAGCGGCCAGCTCAAGCGGCTGAGCGAGCACAAGTACAGCTGCTCGTCGGCGAGCTTCATGGACAGCTTGCTGCAGCCCTGGTGGGAATGGCTGACGCGGAAGCTGCCGCTCTGGCTCGCGCCCAACCTCATCACCGTGCTCGGCCTGCTCGTCAACGTAGCCACTACGTTGATACTCGTCTGGTACGCGCCCGATGCCAAAACCgagCCACCAAGATGGGCATGTTTTTTATGTGCGCTAGGActttttatatatcaaagtTTAGATGCTATTGATGGTAAACAGGCAAGAAGAACTAATACATCTACACCACTTGGGGAACTGTTTGACCATGGTGTGATTCTATTTCTACAGataCCATTTGTAGAGGGTTTTcagtttaaatatttgatagGAGTTATGACAGTAATCTGTGCATTGACAAACTTATACCCCATTCTTTCGGTGATTTTAACCGGAGGTGTGGGCAAGAATGGTTCAACTGTGGCTGGAACGTCGGTACTGTCCCCCGTCATACCCTTCAGCTTCGTCGTCGTGCCGGCCTTCATTATTTACTGGAAGAGTAACGAGCACGTCTACGAAAATCATCCAATTTTGTACATACTCGCGTTCGGAATGGTCGCTGCCAAAGTCACGAATCGCCTTGTCGTCGCTCACATGTCCAAGAGCGAGATGCAGTATTTAGATAGCGCATTGTTAGGACCGGCGATGCTGTTTTTGAATCAGTACTTTAACTTCTTCATCAAAGAGTATATCGTTCTTTGGCTGTGTttcATCTGGGCTACTGTGGATTTGCTTTGGTACAGTGCAAAAGTTTGCCTGGAAATCTGTGATCATCTTAACATTCACTTATTCAAGATACCGCTGATGGAGGCTGCCCAACATCAGCGCAACAATGCCGGATCGTCGGACAAAAATGGTACTTCTATTACTACCAGGTCTCAAAGTTACCCATgtgaccagtgcgagaagaaatttgtaaaaagatcGATTTTGTTTGCGCACCAACAACTCCTACACAAAGATCAggaagatttcacatgcgaccagtgcgagaagaaatttggggatcgaAACAATTTGAAcgaacaccaaaaaatagtccacgaaagttgcaaagatttcgcttgcgacaagtgcgaaaaaaaatttggacttaaaTGGATcttgcttttacaccaaaaaacagtacatgatgGTCGCAGAGATTACGAATGCAACAAGTATGAAAGtaaatttggaataaaatcaaatttgcttactcaccaaaggacagttcacgaaggtcgtaaagattacgcatgtgacaagtgcgagaagaagtttgggTACAAATCGACTTTGCTattgcaccaaaagacagtccacgatggtcgtaaagattacgtatgtgacagatgtgagaagaaatttggagatcgGCAGCAATTACTCAGacaccaaagaacagtacacgaagatcgcaaagattacgcatgtgacaagtgtgaaaagaaatttacacaaaaacagagtttgctcTGCATTCGAAGAACAGttcacgatggtcgcaaagattacgcgtgcgacaagtgcgagaagaaattttcacgTAATGGGCATTTGCTTgtccaccaaaaaacagtccacgaaggtcgtaaagattacccatgcgacaagtgcgagagaaaattcggACTAAAACAGAATTTGCTcttccaccaaaaaacagtccacgaaggttgcaaagatttcgcatgcgacaaatgtgaaaagaaatttggacaaaaatcggatttgATGAACCACCAAAGAACCGTAaacgaaggtcgcagagatttcgcatgtgaaaattgtgagaaaaaatttggacgaaaatcgactTTACTTTTCCATCAAACGACAGTACAccaaggtcgaaaagattatgcatgcgacaaatgcaagaagaaatttggaaaaaaatcaaagttgcTCACCCACctaaaaacagtacacgaaggtcgcaaagatttcgcatgtgaaaagtgtgaaaaaaaatttgtggatGAAAGCAACTTAAGAGatcatataaaaatagttCACGAAAGTtccaaagatttcgcatgcgattcgtgtgagaagaaatttgtggaCGAAAGTAACTTGAGAGAACATATAAAAATAGTCCACgcaggttgcaaagatttcgcttgcgacaagtgcgaaaaaaaatttggacttaaaTGGATcttgcttttacaccaaaggacaatacacgatggtcgaaaagattttgattGTGACCattgcgataagaaatttggacaaaaatcggcTTTGTTCACCCATCAAAAGACGGTACACGAAGATCGTATAGAATACGAATGCGACaggtgcgaaaaaaaatttggacttaaaTGGATCTTGCTGttacaccaaaggacagtacacgaaggtcgtaaagattttgattGCGATATGTGCGATCagaaatttgaacaaaaatcgactttgatTTTACATCTAACAACAGCCCATGAGGATCAGAAAGATTACCAATGCaacaggtgcgagaagaaattcggacacaAACATactttgcttttacaccaaaagacagcccacgaaggtcgcaaagattttgtttGCGATtcgtgcgagaagaaatttgtggaCGAAAGCAACTTGAGAGAACATataaaaatagtccacgaaggttgcaaagatttcgcttgcgacaagtgcaaaaaaaaatttggacttaaaTGGATcttgcttttacaccaaaggacaatacacgatggtcgaaaagattttgattGTGACCAttgtgataagaaatttggtttaAAATCGGCTTTGATTTTGCACTTAACAACAGTCCACGAGAATCAGAAAGATTACCAATGCGACAgGATGGTCCACGATGGTCGTacagattacgcatgcgacaagtgcgagaataaatttgggaataaaagcaatttgaacaagcaccaaaaaatagtccacgagggtcgtaaagattacgcatgtgacagatgtgagaagaaatttggacaaaaaatgcatttgctccgtcatcaaaagacagtacactatggttgcaaagatttcgcatgcgacaaatgtgaaaagaaatttggacaaaaatcgagctttctcgtccaccaaaggacagtgcACGAGGGTCGAAAAGACTACGCTTGCgaaaagtgcgagagaaaatgtggaagtaaatcagatttgtcgAGGCACCAAAGggcagtccatgaaggtcgaaaagattttgaatgtaataAGTGCGATCAGAAATATGGATACAAATACAATTTGCTTgtgcaccaaagaacagtacatgaaggtcgcaaagattacttatgtgacgattgtggaaagaaatttggacaaaaaactcttttacttttgcacaaaaaaacagtacatgaaggtcggaaagatttcgtatgtgacaagtgcgataaaaaattcggACTAAGAAAGAATTTGCTCTTCCATCAAAGAACAGTACATGATGGTCGGAAAGATCACATATGTAATAAATGccataagaaatttggatataaatcagAGTttttgaagcaccaaaggacagtccacgaaggtcgcatagattacgcatgcgacaaatgcgagaagaaatttggactaaaatcgaatttgcttgctcaccaaaggacagtccacgaaggtcgtaaagatttcgcatgtggcaagtgcgagaagaaatttggacgaaaaaagGATCTGCTAGTTCACCAAatgacagtccacgagggtcgcaaagatttcgcatgcgGCGGTCGACTCCAATCTGGCGTTCtgtacgagagagagcgatGTAGCGTAAATAACGACATAGCAacggaaaaataa
Protein Sequence
MSVANSLTNHWQWDEFAVSAIIAIGGCLFSKNRESRKHHDTTKNITNSRGKYCPRENVRRYPGLTENWSRLIGPGDTPTRQARNNLLWLWFTSAMVYHSLVVTPGGRLTESRHWNVALAGAFEIAVYVFMHFAVKRKRRVQPLVAAVALAGGAVFLLGCLAATPKDTYAIFKVALAHVGKLANVAVFYLLRMMTIEIFPTVMRGSGLGLCIFFQMLGGFATTALGTSARIETFSKILHRSFRNQSGKLIRYQRLFHGKQSKKNRIKVVAIDETFNLSPTTIDYVNYLPRKMQKTSKMTIFSIAFIINHFSSIGIYNTSKFSGYKDEPDFDENGKPVLRRSTPLHHVSELLGDQGLDVARELFKIYDRFDVNYIDKSGLTHLHVACGYGFDNVVEKFLELGQNPNCPVDVKGNSPQNFGAVYTQWIKLLPINKRGNRENSADTLFEMRGKKHQLVQINAQDKHGATPLHCAANSRNKKIIELLLKNGADPNLTTKYNTITPLHVICYKKRGEGLLELFFKICREINQPVRVNAQDNVSCTPLHWASQHDKNNKVVELLIRNGASPYLCNFYGETPLQICLRKGDDESVKAIFKFNGEVNRLFAFSTSVLFVNRLRSHETTMQYAVRNFRPHLVDVLLDLGADLSGFVFPATSSLIITSVIHKLSSAMISKNVIAPFKMNSCILSLYFQQKIQMKCILPFNKDKILSSGQLKRLSEHKYSCSSASFMDSLLQPWWEWLTRKLPLWLAPNLITVLGLLVNVATTLILVWYAPDAKTEPPRWACFLCALGLFIYQSLDAIDGKQARRTNTSTPLGELFDHGVILFLQIPFVEGFQFKYLIGVMTVICALTNLYPILSVILTGGVGKNGSTVAGTSVLSPVIPFSFVVVPAFIIYWKSNEHVYENHPILYILAFGMVAAKVTNRLVVAHMSKSEMQYLDSALLGPAMLFLNQYFNFFIKEYIVLWLCFIWATVDLLWYSAKVCLEICDHLNIHLFKIPLMEAAQHQRNNAGSSDKNGTSITTRSQSYPCDQCEKKFVKRSILFAHQQLLHKDQEDFTCDQCEKKFGDRNNLNEHQKIVHESCKDFACDKCEKKFGLKWILLLHQKTVHDGRRDYECNKYESKFGIKSNLLTHQRTVHEGRKDYACDKCEKKFGYKSTLLLHQKTVHDGRKDYVCDRCEKKFGDRQQLLRHQRTVHEDRKDYACDKCEKKFTQKQSLLCIRRTVHDGRKDYACDKCEKKFSRNGHLLVHQKTVHEGRKDYPCDKCERKFGLKQNLLFHQKTVHEGCKDFACDKCEKKFGQKSDLMNHQRTVNEGRRDFACENCEKKFGRKSTLLFHQTTVHQGRKDYACDKCKKKFGKKSKLLTHLKTVHEGRKDFACEKCEKKFVDESNLRDHIKIVHESSKDFACDSCEKKFVDESNLREHIKIVHAGCKDFACDKCEKKFGLKWILLLHQRTIHDGRKDFDCDHCDKKFGQKSALFTHQKTVHEDRIEYECDRCEKKFGLKWILLLHQRTVHEGRKDFDCDMCDQKFEQKSTLILHLTTAHEDQKDYQCNRCEKKFGHKHTLLLHQKTAHEGRKDFVCDSCEKKFVDESNLREHIKIVHEGCKDFACDKCKKKFGLKWILLLHQRTIHDGRKDFDCDHCDKKFGLKSALILHLTTVHENQKDYQCDRMVHDGRTDYACDKCENKFGNKSNLNKHQKIVHEGRKDYACDRCEKKFGQKMHLLRHQKTVHYGCKDFACDKCEKKFGQKSSFLVHQRTVHEGRKDYACEKCERKCGSKSDLSRHQRAVHEGRKDFECNKCDQKYGYKYNLLVHQRTVHEGRKDYLCDDCGKKFGQKTLLLLHKKTVHEGRKDFVCDKCDKKFGLRKNLLFHQRTVHDGRKDHICNKCHKKFGYKSEFLKHQRTVHEGRIDYACDKCEKKFGLKSNLLAHQRTVHEGRKDFACGKCEKKFGRKKDLLVHQMTVHEGRKDFACGGRLQSGVLYERERCSVNNDIATEK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-