Tbra004147.1
Basic Information
- Insect
- Trichogramma brassicae
- Gene Symbol
- -
- Assembly
- GCA_902806795.1
- Location
- CADCXV010001560.1:667536-717250[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 8 0.00041 0.46 10.5 0.2 14 43 236 262 229 263 0.76 2 8 0.03 34 4.5 1.4 19 44 269 291 264 291 0.85 3 8 0.00041 0.46 10.5 0.2 14 43 505 531 498 532 0.76 4 8 0.03 34 4.5 1.4 19 44 538 560 533 560 0.85 5 8 0.00041 0.46 10.5 0.2 14 43 774 800 767 801 0.76 6 8 0.03 34 4.5 1.4 19 44 807 829 802 829 0.85 7 8 0.00041 0.46 10.5 0.2 14 43 1043 1069 1036 1070 0.76 8 8 0.071 79 3.3 0.4 19 29 1076 1086 1071 1096 0.79
Sequence Information
- Coding Sequence
- atgtTTTATGTATGGCTTACGCCGAGGCCGTTTCCCAAGCACGGCATAGTCTCTTCGCGCTATACGCTCTGCGGTGTCATCGCTcccgccacacacacacgcacaagtgcactgctgctgctgctgctgctgcagtcgcaGTCGACGACGcatcgaggcgcgcgcgcgttaaacGATACCAACCATGactttcgaaaatctgaaGAAAGTCGCAAAAGTGAATGTGATGATGAAGTAGAAATAGTCGTTGAATGTGAAGACGTAAAGCCCTACATTAAATCATtgacagttgaaaaaaatgactctGAAAGCCACTTGCAGTATATGAAATACTGTTATgataataaaactaaaaacataattaaaatagaagcCGTGAAAGAAGTGAAAGAAGAGATTTTTTGTGACGTTCCAGAAGAATCAAATTTGAACTTCGACTGTGATCGtgtcaaacaaaataaaaaacgaagaatTACAAGAGAGTTTGACAacgaacataacctcaaagcacGCGTTAGTGCGGTGCATAATTATACATGTGTgaaatatgcggaaagaaattctcgACTAAACAGGATCTCAAAGTCCACGTTAATGGGaagcataatggtatcacccATAAATGCGATATATGTGGCAATACATTTACATTCAAATCTAATCTCAGAGTTCACATTGATACGGTTCATAATGGTATCACCCATAAATGCGATGTATACGTGTAATGAATGCGGAAAGACTttgtcaagaaaaaattatctccAAAGCCATATCGACgcggtgcacaatggtgtgAGACATGGATgtaatatttgcggaaagtcATATGTTTTTAAAGGtcatctcaaaacccacattgATACGGTACACAAAGGTATAAGTTACCCATGCGATTcttacctGGCGGTGACATTGAATAAACCATTGAATTccatacttttcaacaatcaatTGTTCTGGGATGATTTTACACATCACACTAACAGTAACCATGactttcgaaaatctgaaGAAAGTCGCAAAAGTGAATGTGATGATGAAGTAGAAATAGTCGTTGAATGTGAAGACGTAAAGCCCTACATTAAATCATtgacagttgaaaaaaatgactctGAAAGCCACTTGCAGTATATGAAATACTGTTATgataataaaactaaaaacataattaaaatagaagcCGTGAAAGAAGTGAAAGAAGAGATTTTTTGTGACGTTCCAGAAGAATCAAATTTGAACTTCGACTGTGATCGtgtcaaacaaaataaaaaacgaagaatTACAAGAGAGTTTGACAacgaacataacctcaaagcacGCGTTAGTGCGGTGCATAATTATACATGTGTgaaatatgcggaaagaaattctcgACTAAACAGGATCTCAAAGTCCACGTTAATGGGaagcataatggtatcacccATAAATGCGATATATGTGGCAATACATTTACATTCAAATCTAATCTCAGAGTTCACATTGATACGGTTCATAATGGTATCACCCATAAATGCGATGTATACGTGTAATGAATGCGGAAAGACTttgtcaagaaaaaattatctccAAAGCCATATCGACgcggtgcacaatggtgtgAGACATGGATgtaatatttgcggaaagtcATATGTTTTTAAAGGtcatctcaaaacccacattgATACGGTACACAAAGGTATAAGTTACCCATGCGATTcttacctGGCGGTGACATTGAATAAACCATTGAATTccatacttttcaacaatcaatTGTTCTGGGATGATTTTACACATCACACTAACAGTAACCATGactttcgaaaatctgaaGAAAGTCGCAAAAGTGAATGTGATGATGAAGTAGAAATAGTCGTTGAATGTGAAGACGTAAAGCCCTACATTAAATCATtgacagttgaaaaaaatgactctGAAAGCCACTTGCAGTATATGAAATACTGTTATgataataaaactaaaaacataattaaaatagaagcCGTGAAAGAAGTGAAAGAAGAGATTTTTTGTGACGTTCCAGAAGAATCAAATTTGAACTTCGACTGTGATCGtgtcaaacaaaataaaaaacgaagaatTACAAGAGAGTTTGACAacgaacataacctcaaagcacGCGTTAGTGCGGTGCATAATTATACATGTGTgaaatatgcggaaagaaattctcgACTAAACAGGATCTCAAAGTCCACGTTAATGGGaagcataatggtatcacccATAAATGCGATATATGTGGCAATACATTTACATTCAAATCTAATCTCAGAGTTCACATTGATACGGTTCATAATGGTATCACCCATAAATGCGATGTATACGTGTAATGAATGCGGAAAGACTttgtcaagaaaaaattatctccAAAGCCATATCGACgcggtgcacaatggtgtgAGACATGGATgtaatatttgcggaaagtcATATGTTTTTAAAGGtcatctcaaaacccacattgATACGGTACACAAAGGTATAAGTTACCCATGCGATTcttacctGGCGGTGACATTGAATAAACCATTGAATTccatacttttcaacaatcaatTGTTCTGGGATGATTTTACACATCACACTAACAGTAACCATGactttcgaaaatctgaaGAAAGTCGCAAAAGTGAATGTGATGATGAAGTAGAAATAGTCGTTGAATGTGAAGACGTAAAGCCCTACATTAAATCATtgacagttgaaaaaaatgactctGAAAGCCACTTGCAGTATATGAAATACTGTTATgataataaaactaaaaacataattaaaatagaagcCGTGAAAGAAGTGAAAGAAGAGATTTTTTGTGACGTTCCAGAAGAATCAAATTTGAACTTCGACTGTGATCGtgtcaaacaaaataaaaaacgaagaatTACAAGAGAGTTTGACAacgaacataacctcaaagcacGCGTTAGTGCGGTGCATAATTATACATGTGTgaaatatgcggaaagaaattctcgACTAAACAGGATCTCAAAGTCCACGTTAATGGGaagcataatggtatcacccATAAATGCGATATATGTGGCAATACATTTACATTCAAATCTAATCTCAGAGTTCACATTGATACGGTTCATAATGGTATCACCCATAAATGCGATGTATACGTGTAATGAATGCGGAAAGACTttgtcaagaaaaaattatctccAAAGCCATATCGACgcggtgcacaatggtgtgAGACATGGATgtaatatttgcggaaagtcATATGTTTTTAAAGGtcatctcaaaacccacattgATACGCGCTTGGCACTGCGGTACTCGGCGGCCTACGTACCCGAGTGTGCGGCCGCATCCAATGAGCAAGATCCCAAAAGCGCAAGAAGATTGCGTCGGACGCGCGTGGAGGGATCGAGAAAAGAGacgTACTGCAGCTATGCACGACGATTCGAGCGGCAACAAGAGATATTGCGTCGtcagccgtcgtcgtcgcgatcagcacacacacacagccgcGCACCGAGAGGTCAACGTCCGGGACGTCCTTGCCGAGAcgccgccgcgcgcggccGTCGCCGTATACTGAGCCGCACACTGCAGCAGAACGCGGGGCGGCGAGCTGCTCGACGACGCGGCGCGGCACACACTCGGAGCGCAGCACGTCAGAGCTCGGCGGCACGATTTCGGGCCAGCCGTACGCATTACCAGTCATCACTCCGGCGACTCGCTCTTGTCGCGCGCTATGTACAATTTACGCTGCTAATCATTGAGAACATGTTTAGCAAAGTAAATTGTACATCGCGCGCGACAAGAGCGAGTTGCCGGAGTGCCGACTGGCAATGCGTACGGCTGGCCCGAACTCGCtaa
- Protein Sequence
- MFYVWLTPRPFPKHGIVSSRYTLCGVIAPATHTRTSALLLLLLLQSQSTTHRGARALNDTNHDFRKSEESRKSECDDEVEIVVECEDVKPYIKSLTVEKNDSESHLQYMKYCYDNKTKNIIKIEAVKEVKEEIFCDVPEESNLNFDCDRVKQNKKRRITREFDNEHNLKARVSAVHNYTCVKYAERNSRLNRISKSTLMGSIMVSPINAIYVAIHLHSNLISEFTLIRFIMVSPINAMYTCNECGKTLSRKNYLQSHIDAVHNGVRHGCNICGKSYVFKGHLKTHIDTVHKGISYPCDSYLAVTLNKPLNSILFNNQLFWDDFTHHTNSNHDFRKSEESRKSECDDEVEIVVECEDVKPYIKSLTVEKNDSESHLQYMKYCYDNKTKNIIKIEAVKEVKEEIFCDVPEESNLNFDCDRVKQNKKRRITREFDNEHNLKARVSAVHNYTCVKYAERNSRLNRISKSTLMGSIMVSPINAIYVAIHLHSNLISEFTLIRFIMVSPINAMYTCNECGKTLSRKNYLQSHIDAVHNGVRHGCNICGKSYVFKGHLKTHIDTVHKGISYPCDSYLAVTLNKPLNSILFNNQLFWDDFTHHTNSNHDFRKSEESRKSECDDEVEIVVECEDVKPYIKSLTVEKNDSESHLQYMKYCYDNKTKNIIKIEAVKEVKEEIFCDVPEESNLNFDCDRVKQNKKRRITREFDNEHNLKARVSAVHNYTCVKYAERNSRLNRISKSTLMGSIMVSPINAIYVAIHLHSNLISEFTLIRFIMVSPINAMYTCNECGKTLSRKNYLQSHIDAVHNGVRHGCNICGKSYVFKGHLKTHIDTVHKGISYPCDSYLAVTLNKPLNSILFNNQLFWDDFTHHTNSNHDFRKSEESRKSECDDEVEIVVECEDVKPYIKSLTVEKNDSESHLQYMKYCYDNKTKNIIKIEAVKEVKEEIFCDVPEESNLNFDCDRVKQNKKRRITREFDNEHNLKARVSAVHNYTCVKYAERNSRLNRISKSTLMGSIMVSPINAIYVAIHLHSNLISEFTLIRFIMVSPINAMYTCNECGKTLSRKNYLQSHIDAVHNGVRHGCNICGKSYVFKGHLKTHIDTRLALRYSAAYVPECAAASNEQDPKSARRLRRTRVEGSRKETYCSYARRFERQQEILRRQPSSSRSAHTHSRAPRGQRPGRPCRDAAARGRRRILSRTLQQNAGRRAARRRGAAHTRSAARQSSAARFRASRTHYQSSLRRLALVARYVQFTLLIIENMFSKVNCTSRATRASCRSADWQCVRLARTR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01481841;
- 90% Identity
- iTF_01481841;
- 80% Identity
- iTF_01481841;