Tbra012620.1
Basic Information
- Insect
- Trichogramma brassicae
- Gene Symbol
- CAMTA2
- Assembly
- GCA_902806795.1
- Location
- CADCXV010000645.1:226854-262222[+]
Transcription Factor Domain
- TF Family
- CG-1
- Domain
- CG-1 domain
- PFAM
- PF03859
- TF Group
- Unclassified Structure
- Description
- CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein [2]. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin -binding domain and ankyrins (ANK) motifs [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.1e-43 1.8e-39 134.0 1.1 10 116 251 355 247 355 0.98 2 3 1 1.7e+04 -4.6 2.9 21 76 525 581 519 592 0.52 3 3 1 1.7e+04 -5.7 3.5 69 81 762 772 737 801 0.44
Sequence Information
- Coding Sequence
- ATGAGAGGTCGTTACTGCAATAGACTGGTCGTCGTACGTGCAGGAGCTGGTGGCGATAGTGGTGCTGGCTGTGCCGCCGACGATAAAAACACGAATCATCATcgtaacaacaataataataataataacagcaAGAACCGGACGAGCAAGATGGCTGGATTTCATGGCCACGCGTCTGGACACCAGCGCGTTGTTTATCACGCGTCTTATCCCACGCCTTTAGCACCGACTCCGTCTGGTATGTCCGTAGATGGAGATCCGATCAAGCTGCCAGAAAATTTGGAGACGCTGCCGCGTGCGGAGCATTTTCCTACACAAAGGCATCGATGGAATACCAATGAGGGAGTTCAGAAAACGGACGAGAATTTAAAGATGAGATTGACAGGCAGCAGTGCGAGGAGCGAGGAGAAATCGATTAAGGAAAAGGACAATATTGATAGATTTAAAAGCGGTGAGCGAGTAgctgagtgtaccGAATGTAACGCATCCTTGCCATTATTGCAATTATCATCAGGCATCGCGCGAGTCAAAAAGTACGCGCGAACAAAGCACGGGGGTAAACActtcaaaatattattcggGCTAGCGAGATTTTACgcgataattataaaattagttaatgtaaagaaagaaaaggtttttaaaaatcacaGCATGATCAATagaagtttaaaatattttattgttatgttCAAAGGTTTCCGAGAAAATCTCACACTTTCAAGATTTGCTACAATCATGTACTACTTTAATGAAATCGCAGCGATCCTAATCAGCTTTCAGCGTCACGCGGAATGGCAGAGTCGAGAGGTGAAGGTGCGACCTCGCAGCGGCTCGATGCTGCTCTACTCCCGAAAGAAGGTCCGCTATCGACGAGACGGCTACTGCTGGAAGAAGCGCAAGGACGGCAAAACTACCAGAGAAGATCACATGAAGCTCAAGGTGCAAGGCGTGGAGTGCATCTACGGCTGCTACGTGCACTCGGCCATTCTGCCCACGTTCCATCGTCGCTGCTACTGGCTGCTGCAGAATCCGGACGTGGTGCTGGTGCACTACCTCAACGTGCCCTATCCGGACGGCGACGCCAAGCTGGCCGCGCTGCCGCCCTGTCTCGCGCTCCCGGCCGACAAGAAGGAGTGGACACGGGACGAGCTCACCTGCCAGCTGAGGCCGATGTTTCTCAGCGGCGCGGACGACGTTGCTGGCGCCGATGGAACCGGTGCCACCAATAACAATACGCACGGCCTGCAGCAACCCGGTGCTGGCGCGCATCATCCCGTGGACATGATCGTGTCGCAGCTGCTCGACCGGCAGAGAGCTTCCAATGCCGGTTCCAGTGCCGCCACCCAACTGGCACCCAGAAGACTTACCCCGGACAATCAGGTCTCGTCGACGACCGGTGGTCAGCACCCGAGCTCGTCCGCGACGACGCCCCGAGTCTACTCGAGGCACTCGCACTCCGCGGCGAATCAGCAGGCCGCCCCCCTGGTGCTGAGTCTGCAGCAGATTCAAGGCGGCGGTGGTCTGCTCATACTCAACAGTCAACCGTATCATcatcaacagcaacagcagcaacagcagcagcagcagcagcagcagcagacgcatCAGCCGCAGTCGCAGCAACAGTCGCCCACGTCCCAGACTCAAGCGCAAAGTCCGCTGGAGCTGCATCAGGTGCAACAGCAAACGGAGCAACAAcaccatcagcagcagcagcagcatcagcaactCGTCGTGCGACAGACTTCGCTCGATCACGAGCACCAGAAGCAGCACGACATCGACTCCAAAGACAGCAGTAGTCACGGaagCGGCATGCTGTCGGACTGCTCgggtcagcagcagcagcagcagcagcaacagggaggcgtgcagcagcagcaatcggGTGGTGCTGCTCCTGCGACCTCCGGCGGGGGGGTCGTCGCGGACTTCGTGGAGACGCTGGACCTCAGCCAAGAGGACATACAGCGCACCTTGTCGGCCAATATGGTGCATCATCATCACTCGTCGCCGTCCCCGTCGCCGGCCGACAACAGCATCATCAATCCGATGGACTTCATCGACTCGACCGACGACGTGCTGGTCAATCTCGACGCCTTCGACATGTTCAGCGACCTGCCCGAGCTGCACGACTTCGACGCGgccgcggccgccgccgcagccgctgCCACCGAGGCCGAAGCGGCAGTAGCGGTGGGTGGCAACAAGACTGACAGCACAaaccatcagcagcagcatcagcatcagcatcaccttcatcaacagcaacaacgacaTCAAcatcagcaacaacagcaacatcagcatcatcatcatcatcatcatcatcagcagcaacaacaacagcaacaacagcagcactGCATCAGTCCGGATAACGAGGCCGTAGCTCATTGTCTCTCGGCCAGCAATGCCTCTCCGGGCaacagcaccagcagcaccgTCCACATAGCCGAGTACAGCCCGGAGTGGAGCTACACCGAGGGCGGCGTTAAGGTGCTGGTGGCGGGCCCGTGGACGGGCAACACGTCGCAGTCCTACTCGATACTGTTCGACGGCGAGCCCGTGGAGGCGTGCCTGGTCCAACCGGGCGTgctgcgctgccgctgcccgGCCCACTCGGCCGGCGTCGCCTCGCTTCAAGTGGCCTGCGACGGCTACGTCGTCTCCGACAGCGTCGCCTTCGAGTATCGCCGCGCGCCCCAGAACGAGCCCAGCCCGGAGAAGGCCCTACTCGACAGGCTGGCGGACGTGGAGACGAGGCTGCAGGGACCGGGTCCGCCCTCGCCGGCGGCCCATCTCGAGGAGCGGCTGGTGGCCTACTGCCAGGACGCCGTGATCCGTCCGTGGCGCAACGGCGCCGAGCCCCTGCAGTCGGGCGGTCCGACGCTGCTGCATCTCGCCGCGGGTCTCGGCTACTCGCGGCTGGCCTGCGCACTGCTGCACTGGCGCGCCGAGAACCCGAGCGGTGTGCTCGACGCCGAGGTCGACGCGTTGAGGCAGGACGCGGCGGGACTGACGCCGCTCGCCTGGGCCTGCGCCGCTGGTCACGCCGATACGGCGCGTATACTCTACAGATGGAACGCGATGGGACTGCGAGTGAGGGACTGTCAGGGCAAGAGCGCGACCGAGTTGGCCGCGGAGAACGGCTACCACGCCATCGCCGACGAGCTGAATCGTTTGGAGGCGCACAGGCAGGACGAGAAGCTGTTCTTGAAGCCGGCCAGTCCGAGTCCGAGGAGGCTGTCACAAGACAGCGGACTCGATCTCGCCTATTGGGAAGAGGACGCAAAAGTTCTGACCTTGGCCGAGAAGATAATCGCGGCTCTGCCGGATAGAATCAAAAGGGAGCAGTGCGAGGTGGCGACGTCGTCACCGGCTTCGCCGCGAATGTCCCTGTCTCCCCTCGAGGACGCCCTCATGGAGCAAATGCCCATCGACGCGGGCGAGCTGTTCGACTCGTATCGCgactgcagcggcggcgccaCCTCGGTCTCGGACGTGGACGCCGAGGCCAGTCCCTCGTCGCCGTCGAGCAGCTGCCTGACACCGGACTCGCCCTCGCCGCCCCCGACCTCCGACGACTTTTGCGACTttctgcagctgcagctggaCGGAGGCGGCGGAGGCAGTAGCGCTGGTTGTTCCGGTAGCAGCAGCCAACAGCAGAGCAGCTGCTCGACCGACAAGATAATCGGTAGCGCGGCCATCGCCGCCACGAGCAATTCGGACGGAGGCGGCGGCGAGGCCGACCTCTCGAGACTGACGCTGTCGGATCGGGAGCAGCGCGAGCTGTACCAGGCCGCGCGCATGATACAGAAGGCCTACAGGAGCTACAAGGGCAGACAGAGGCAGGAGGAGGCCGAGCGACACGCGGCCGTCCTCATACAGCAGTACTACAGACGACACAAGCAGTTTTCCTATCACACACAAGCGACAAAAGCCGCCATGGTCATACAGAGCAACTACAGGAATTACCGCTCGCGTCCCGGAGTAGCCGCGAGCGCGCGACAGCAGGccgtgcagcagcaggcggCCCACCAGGCGGCGCGCAAAATTCAACAGTTCATGCGGCAATCAAAAATTAACACCTAcgtcatcatcagcagcaacagcaacaacagcagcagcagcagcatctggttcatcatcatcagcaatCGAGCATGTTCGAGCTGTCGCCGACTCTGCGCAGTCAGACTGCCGTTTGAAgcaggaagaagaagaagaagtgaaACGAAAACACCaaagccaaaaataaaaaaaaaccaaagaatAATCGAGAAAACGCCCTGCGTTCCTGTTGGTTCTTaa
- Protein Sequence
- MRGRYCNRLVVVRAGAGGDSGAGCAADDKNTNHHRNNNNNNNNSKNRTSKMAGFHGHASGHQRVVYHASYPTPLAPTPSGMSVDGDPIKLPENLETLPRAEHFPTQRHRWNTNEGVQKTDENLKMRLTGSSARSEEKSIKEKDNIDRFKSGERVAECTECNASLPLLQLSSGIARVKKYARTKHGGKHFKILFGLARFYAIIIKLVNVKKEKVFKNHSMINRSLKYFIVMFKGFRENLTLSRFATIMYYFNEIAAILISFQRHAEWQSREVKVRPRSGSMLLYSRKKVRYRRDGYCWKKRKDGKTTREDHMKLKVQGVECIYGCYVHSAILPTFHRRCYWLLQNPDVVLVHYLNVPYPDGDAKLAALPPCLALPADKKEWTRDELTCQLRPMFLSGADDVAGADGTGATNNNTHGLQQPGAGAHHPVDMIVSQLLDRQRASNAGSSAATQLAPRRLTPDNQVSSTTGGQHPSSSATTPRVYSRHSHSAANQQAAPLVLSLQQIQGGGGLLILNSQPYHHQQQQQQQQQQQQQQQTHQPQSQQQSPTSQTQAQSPLELHQVQQQTEQQHHQQQQQHQQLVVRQTSLDHEHQKQHDIDSKDSSSHGSGMLSDCSGQQQQQQQQQGGVQQQQSGGAAPATSGGGVVADFVETLDLSQEDIQRTLSANMVHHHHSSPSPSPADNSIINPMDFIDSTDDVLVNLDAFDMFSDLPELHDFDAAAAAAAAAATEAEAAVAVGGNKTDSTNHQQQHQHQHHLHQQQQRHQHQQQQQHQHHHHHHHHQQQQQQQQQQHCISPDNEAVAHCLSASNASPGNSTSSTVHIAEYSPEWSYTEGGVKVLVAGPWTGNTSQSYSILFDGEPVEACLVQPGVLRCRCPAHSAGVASLQVACDGYVVSDSVAFEYRRAPQNEPSPEKALLDRLADVETRLQGPGPPSPAAHLEERLVAYCQDAVIRPWRNGAEPLQSGGPTLLHLAAGLGYSRLACALLHWRAENPSGVLDAEVDALRQDAAGLTPLAWACAAGHADTARILYRWNAMGLRVRDCQGKSATELAAENGYHAIADELNRLEAHRQDEKLFLKPASPSPRRLSQDSGLDLAYWEEDAKVLTLAEKIIAALPDRIKREQCEVATSSPASPRMSLSPLEDALMEQMPIDAGELFDSYRDCSGGATSVSDVDAEASPSSPSSSCLTPDSPSPPPTSDDFCDFLQLQLDGGGGGSSAGCSGSSSQQQSSCSTDKIIGSAAIAATSNSDGGGGEADLSRLTLSDREQRELYQAARMIQKAYRSYKGRQRQEEAERHAAVLIQQYYRRHKQFSYHTQATKAAMVIQSNYRNYRSRPGVAASARQQAVQQQAAHQAARKIQQFMRQSKINTYVIISSNSNNSSSSSIWFIIISNRACSSCRRLCAVRLPFEAGRRRRSETKTPKPKIKKNQRIIEKTPCVPVGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -