Tbra012365.1
Basic Information
- Insect
- Trichogramma brassicae
- Gene Symbol
- Smarcc1
- Assembly
- GCA_902806795.1
- Location
- CADCXV010000841.1:175410-180288[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.6e-11 1e-07 31.8 0.1 1 43 339 384 339 387 0.92
Sequence Information
- Coding Sequence
- ATgaggccaaaacgaaaaagccGTCTTGCGACGGAAAATAAATTCGAACTGTTCGGGACGAATGTAAAATTGGAGATAGTGCAGAAGAAATCGCCCGAAATCAAACAAGAGGCAGCGAAGGGGAGCATCGACTTTCACGACGACAATTGTCATTACGATCTGTCCCGAAATGGGGGAGCTGCTGCAGTCGCGAAGGCGCAAGAGAGCCATTCGGGTGACGGCGCACCGGGTCAGGCGaccgacaacaacaacaacaacaacatcaacgaCAAAGTCGACGACAGCGGCACCGCGGACGAGGAGAAAGACGATCGCGTCGATCAGAGCGGTTTGATCGTCGTGCCGAGCTACACCATAGGCTGGTTCGATTACGCCTCGATCCACCACATCGAGCGCCGAGCCCTGCCCGAGTTCTTCAATAACGTCAATCCCCTCAGCAAGACGCCCGAGATGTATCTGTTCTACCGGAACTTCATGATCGACACGTATCGACTGCAGCCGAGCGACTATCTCACCCTGACGGCCTGCAGGCGAAACTTGCCCGGCGACGTGTGCGCCCTGGCGCGGATCCACGGCTTCCTCGAGCAGTGGGGCTTGATCAATTATCGGCCGAGGATGAGAATGTACCTGAAGCCCCGGAAACCCAAGGAAGTCCCCTGCAGACCGTACTCGTCGATCGATAGCACAGCTGCAGCTGTCGACAGTCGGACGCCTACGAGCAAGTGTACGACACCCAAATCGCTCAGGACACCTGCGAACGAGAGCGAATCGCCCCAAACGCCTCGATCGGCTCAAAAGCCAAAAATAATGCAGGACTGTTACGTCAAGTTGTCCGACGTTCTCCAGAGTGGCGGCGGCCGCAACCAAAACCACGACGAACGGTCGTTGCCCAAGCTCGCGAGATCGAGAATCGAGCGCCGTAAAGTACTGGCCCTACTCTTCAAAGCAATAACGAGCCAGGGTGAGGAGCAGTCGGATGCATCTACGAAGACGGAAGTCGAAAGTATCACAACCAGACCGGAATGGACGGAGGTAGAGAATTCGTTGCTGCACGAGGCCTTGGAAATCTACACGGGGGGTAGAAACGACTGGGAAAAGGTGAGCCAGCACGTCGGCACGAGGAGCCTGGAGGAGTGCGTGCTGCACTTCCTGCACTTGCCTAGCGAGGATCCGCGCCCCGAGGAGTCGTTGTACTTCTGGAATGCGgagccgctgctgcggccTCCCGAGCCGCTCGCCCTCATGATCAAGAAGGAGCTCAGCCCCCTGAGCAACGCCGCGGTCTTGCTCGCGGCGATGGTGCACCCGCGCGTGCTCGCCAGGGCGATCGAGGCGGCGACCCGCGAGAGCTACCTTGGAAAATCGGATCCGGCCGTCGTCCAGGCCGACAAAAGCATGAGCGGCATACTGGTATGCTCGCGCGACTGCATCGATCAGAAGATCAACGTCCGTCTCGAGTTCGCCGAGCTCAAGGAACGCGAGTACGAATCGCTGCGAGCTCAGCGGTGGCAGCTCGAGCGCGACAGACAGAAATTTCACTCGGAATTTCGCCAGTATCTGCGGGATCACTTCGAGCCGCAGCTGCAAGGCTCGCCGCAATTCAGACGGCATTTATTGGCGGCTATTGGCCCCCCTGACGTTTTGAGTTGTTGTTTGGGACTCGTGCTCAACGATCAATGA
- Protein Sequence
- MRPKRKSRLATENKFELFGTNVKLEIVQKKSPEIKQEAAKGSIDFHDDNCHYDLSRNGGAAAVAKAQESHSGDGAPGQATDNNNNNNINDKVDDSGTADEEKDDRVDQSGLIVVPSYTIGWFDYASIHHIERRALPEFFNNVNPLSKTPEMYLFYRNFMIDTYRLQPSDYLTLTACRRNLPGDVCALARIHGFLEQWGLINYRPRMRMYLKPRKPKEVPCRPYSSIDSTAAAVDSRTPTSKCTTPKSLRTPANESESPQTPRSAQKPKIMQDCYVKLSDVLQSGGGRNQNHDERSLPKLARSRIERRKVLALLFKAITSQGEEQSDASTKTEVESITTRPEWTEVENSLLHEALEIYTGGRNDWEKVSQHVGTRSLEECVLHFLHLPSEDPRPEESLYFWNAEPLLRPPEPLALMIKKELSPLSNAAVLLAAMVHPRVLARAIEAATRESYLGKSDPAVVQADKSMSGILVCSRDCIDQKINVRLEFAELKEREYESLRAQRWQLERDRQKFHSEFRQYLRDHFEPQLQGSPQFRRHLLAAIGPPDVLSCCLGLVLNDQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01482338;
- 90% Identity
- iTF_01483801;
- 80% Identity
- -