Basic Information

Insect: Trichogramma brassicae
Gene Symbol: -
Assembly: GCA_902806795.1
Location: CADCXV010001017.1:156226-187808[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 1.9e-08 2.7e-05 23.7 0.0 4 41 260 297 257 300 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	1.9e-08	2.7e-05	23.7	0.0	4	41	260	297	257	300	0.89

Sequence Information

Coding Sequence: ATGAGTACAGAAGATAAGGACACCCTCTTGGACCTCTCGGTCCTCACCAATGATGACTCAGGAGAACTAGATCCAGCTGTCTTGGCCCAATTCAAAGCTTATGAGAAAGCCATTGCAACCCTCACAGCTCAGGTGAAAACCTTGGCACAGCGAATCGACAATCAGAACAGCACAGAGCAGTCTGGTCTGCCCACCTCCACTGCTGCTGATACGAGTACTTCTACTGGCTCTTCAATCGCCTCCAATGTCTCTTCAACAGGGTCGACTCTCACCACACAGTGTCACATACAGAGCACTTGCTCTTCGTGCACCAGCGCCCATTGGCCGGGAGCTTCCAACACACAAGCTTTTAATCCTCAAGCACAGGCTTTCTTTCCTCACTCGCACTCACTGCCTCCAAAGCTCGAACCTGGCTCTACTGAGGAGTGCAAGACACCTATTGGCCCTTTACACCAGGGTGCTCCTGCACCCTCAGCACCCAACTTAGGAGACTTGCACAACTCTTCAGAAATGCATTCTGCCCACAACAACTTTGTCGCCTCTGGTCATCCCCTTACAGAATCAATCCTCTTCTCACGGACATGCCCACCTTTTGGCAGCATGATCCTCAACTCTGGTTCGACATGGTCGACACACTGTGGGGAGATGCCCCTGCTCTCGCCCCTCCGTGCACGCCAGTCGGCGCAGTGCGCTGAACGATCAGTACATTGTCACTCAATTCTCTTGatGAAAACTTCTGATCAAGTTGTCAGAACAAAGGGTCTGTGGCACCGTAACCAGCTGATTGGAGCAATTGAGTCCATAGATAACAAGGAGCAGTCAATAAGAGGTGCAGCAAAAAAATACGGTGTACCTGAAAGCTCAATACGAAGACGAATGAAGCCTAGCACTTCTTTAAGAgaaggatctttttttatttttgatttcactaagattctgagGTGTCCTTATTTTAATCATGGCAATAAAGAGGTTGGTTTGGATGATAAATTCATttatgtactaataaacattattattgatgatatttgttgcaaagcccgcgccgtcgaccagcagccctcgctgcgctcgggccgcaAATGTCGGCGGGCTTTGCCATGTAACCtgagaAAAACCTTAAGTTCAAAAAAACcactatttttattcaatgaaaaaacacaattcaaaacGAGAATTGGCCGAGGCCTCGCGTTCAAAGGGCACGCTGCACGGATCTGCCCATCGCGATCAACCTGCCAAGTATGCAATGCAACGAATCACACAAGGGTGCTGCACGAGGGAGGCCCCAAGCGTGGAGCTGCTCGCGATGGCGGTGAACCTCCTGAGAAAGTCACCAGAATGAGTCTCGTAACTCAAAGGGACAACGGGGCAACCAACCCAGCAGCCGGCACTGTCAACGATTTGCCTTCTCGGCTCACAGTGCTACCTACTGCGCTTGTCCGCATCAGCGGGCCACCATCATCACGGTGCGATCTCTTTTCGACAACTGTTCGGAGGTGTCACTCATCGCGCATCCACTCGCCCTCAAGCTGCAGGTGCCGATCCGAGAAATCAATACTGATATCTCCGTCATCGGTGGGGGAGTCGCCCAAAGATCACAATGACGCGTCACCATCCACCTACACCTACCGGGTGTCAGGACACCCATCACTATCGAGGCCAGCTGTCTCTGTCATCTCGGCATCACGACGCCAGCACAACGACTGCCACTCGAAGCGGTCCCCACCAAAATGTGAGGCGTTTTGGCCGACCCGCACTTCTACAAGCCTGGATCCGTGGATCTGCTCCTTGGTGCCAACGTGCTGCCCTCGCCTGGACTGGGACGACGAGCTCCCTGAGAACGCGATCCGCGAGTGGAGAACCATTCGCGAAGGCCTCGACCGACTTACGGAAGTGAGCATACCGCGCTGGACTCAGTCAACTCCCACTTCCACTGACGCACAGATTCACGTTTTTGCTGATGCCAGTCGTCGAGCGATGGCCTCTGTCGCTTACTTACGTCGCCAACAAAACCGCGCTCATCTGCATCTACTCATCGCTAGGACAAAACTTGCGTCTATCAAGAGCTTGAAGGACGATCCACGCAAACAATCGCGCATGACCATTCCATGGCTCGAGCTACGTGCGGCCTTTCTTGCCGTTCGACTGCTGTATGCCATCTGCTCGGAGCTGTCAATCCGCATTGAGGATTGTGTCGCGTGGTCCGACTCACGCATCGTGCTCCATTGGATTCGATCCGCCGAACCGACTGGCAACTCAATCCTTCCGCCTTCGCGACACAAGCTTCATCGCGGACCGACACCGGAGGTGCTTGCACCAATTACTTGCGCTGAGTTGCATGTAGCTTTCCAGACCTGCGTTCGACGAAGTCAGTACCAGAGCTTTGAGCGAGAGCTCACCATCTTGCAGGCCAACCTACCTGTACTAGTTCGGAGCCCGTTGGCTTCAGTCGATCCCTTCATCTGCTTCTATGGGCTTCTTCGAGTCGGCGGGTGGCTGTACCACTCACAACTGTCCTTCAACAAGAAGCACCCACTAATCGTCGACGGGTCCAACGCCTTTGCATCCCTCATCATCAGCTGGGCTCATTTGCAAGCGCTACACGGCGGATTTCGGGCAACTTATGTACAAGTGCTACAACGAGTCTGGCTTATCAATCGCAAGCGTGCGATTAGTCGTCACATTCACCACTGCGTCACGTGTGTCGCAGCGGGGTCAAGAGCGATGTCGCAGATCATGGCTCCTCTCCCGCCAGAGCGTATCACACCCTGTAGAGCATTTGCTCGCACTAGGCTAGACTACGCTGGCCCGTTCCAAGTATGGGCTTCACGAGGACGAGGCGTTCATGCCACCAAGTCATGGGTCGCAGTCTTCGTCTGTTTGACCACGAAGTCAGTGCATCTCGAATTGGCTGGCGACCTCTCCACCGCTAGCCTTCTCTATGCCCTCACCCGATTCAGCGGACGCCGAGGTCGATCCTCGGAGTTATGGAGCGATAATGCAACTCACTTTCATCGCGCCGACCTCGAGATCCGTAATGCGTTGAACAACGAACGTCTCAACTGGACCACGATCTCCGATAGTCTCGctgaagataaaataaaatggagTTTCATCCCGCCTAGCGCACCGCACTTCGGAGGGCTATGGAAAGCCGCGGTGAAGTCGCTCAAGGCTCACTTGAAGCGTACTCTGGGGCCACGGCGAGTCACCTTCGAAGAGAAGTCCACGCTCCTAGTGAGCATCGAAGCAGTCCTCAACAGTCGTCCCCTGTGTCCCGTGACTAATGACTCCGACGATCTTCACGTCTTGACTCCAAGACATTTCCTCGTGGGTACTTCACTGCTCACCATTCCGGAGCAGGATGTCAACGTTGATGGTCTCGATCATCTCCACCATTGGCAGCTCATTCAAGGCCTCCAAGCAGTGTTCTCGAAAAAGTGGAGTCGTGAGTACCTGAACACGCTGCAACAACGCACCAAGTGGCTTCGACAGCGCGAATCGATTGCTGTCGGAGATATCGTCCTGCTGATGGATCCCTCTCTACTCCGGCTTACTGGTCGCTGGCCTCTCGGCCGAGTCATCAAAG
Protein Sequence: MSTEDKDTLLDLSVLTNDDSGELDPAVLAQFKAYEKAIATLTAQVKTLAQRIDNQNSTEQSGLPTSTAADTSTSTGSSIASNVSSTGSTLTTQCHIQSTCSSCTSAHWPGASNTQAFNPQAQAFFPHSHSLPPKLEPGSTEECKTPIGPLHQGAPAPSAPNLGDLHNSSEMHSAHNNFVASGHPLTESILFSRTCPPFGSMILNSGSTWSTHCGEMPLLSPLRARQSAQCAERSVHCHSILLMKTSDQVVRTKGLWHRNQLIGAIESIDNKEQSIRGAAKKYGVPESSIRRRMKPSTSLREGSFFIFDFTKILRCPYFNHGNKEVGLDDKFIYVLINIIIDDICCKARAVDQQPSLRSGRKCRRALPCNLRKTLSSKKPLFLFNEKTQFKTRIGRGLAFKGHAARICPSRSTCQVCNATNHTRVLHEGGPKRGAARDGGEPPEKVTRMSLVTQRDNGATNPAAGTVNDLPSRLTVLPTALVRISGPPSSRCDLFSTTVRRCHSSRIHSPSSCRCRSEKSILISPSSVGESPKDHNDASPSTYTYRVSGHPSLSRPAVSVISASRRQHNDCHSKRSPPKCEAFWPTRTSTSLDPWICSLVPTCCPRLDWDDELPENAIREWRTIREGLDRLTEVSIPRWTQSTPTSTDAQIHVFADASRRAMASVAYLRRQQNRAHLHLLIARTKLASIKSLKDDPRKQSRMTIPWLELRAAFLAVRLLYAICSELSIRIEDCVAWSDSRIVLHWIRSAEPTGNSILPPSRHKLHRGPTPEVLAPITCAELHVAFQTCVRRSQYQSFERELTILQANLPVLVRSPLASVDPFICFYGLLRVGGWLYHSQLSFNKKHPLIVDGSNAFASLIISWAHLQALHGGFRATYVQVLQRVWLINRKRAISRHIHHCVTCVAAGSRAMSQIMAPLPPERITPCRAFARTRLDYAGPFQVWASRGRGVHATKSWVAVFVCLTTKSVHLELAGDLSTASLLYALTRFSGRRGRSSELWSDNATHFHRADLEIRNALNNERLNWTTISDSLAEDKIKWSFIPPSAPHFGGLWKAAVKSLKAHLKRTLGPRRVTFEEKSTLLVSIEAVLNSRPLCPVTNDSDDLHVLTPRHFLVGTSLLTIPEQDVNVDGLDHLHHWQLIQGLQAVFSKKWSREYLNTLQQRTKWLRQRESIAVGDIVLLMDPSLLRLTGRWPLGRVIK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -