Tbra004285.1
Basic Information
- Insect
- Trichogramma brassicae
- Gene Symbol
- pont
- Assembly
- GCA_902806795.1
- Location
- CADCXV010000313.1:364199-374924[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 7 9.8e+03 -3.7 0.1 29 43 551 565 551 566 0.82 2 4 2.2 3.1e+03 -2.1 0.0 27 33 704 710 704 713 0.87 3 4 6.3e-12 8.8e-09 34.9 0.3 4 43 742 781 740 783 0.91 4 4 2.7 3.9e+03 -2.4 0.1 29 39 926 936 926 941 0.82
Sequence Information
- Coding Sequence
- ATGGCTTTGAGTGATAATTACTTTGCCATGCCGATGAACATGGACAGGGTCTGTAGGATATGTTTGCAAGAAAATACTAATCTAACACCAATATTTGGAAATGATCCAAATTTGAGCAACCTGACGGATTTGCCCCAGAAAATACAGATATGCGGTGGTGTTGAATGCAATCAACAAGATGGTTTACCTTCTCATATTTGTGATGTTTGCATTTATAAAGCCACAGTGGCTTATGAATTTAGACAATTATCTCAGCATTCGGATACTCGGTTGAGAGTTTTTTATAACAAGCCAGCCAAATACAGTGCTACAGACTCTGAAACACAAACAGAACATTTGCAGATGATAACTGCATCGAGTCTATTGGTTGAACCACAGCTATCAGATCTccaaaaagaatattttccaaaagtaGAAGAATCTTTAAGCCACTCATCATTCCATAATACCATGGTTACCAAAGATTATACTGTTCAAACACAAGCCACCGATACTGGAGGTGTAACAATGTCGGTGGAAGACAATTCATTTGATTGTCATTTGAATTTCGTTGATCAGCCTCATCTTCACAATCATCAAAACAATGGGGAATTACCTAAAGAAGTTGTAGTAGGCGTAGAAAAAAGCGACACAATTAACGATTCCCAAGAATTACTGACAGTTCCTCTTATAGACGATATGGAAAGCAATAACAAAGGTGTACCGTACTTCACTTATGAAATCGCCAAGGAAGTGGTGGAAAACATGGAAAATCCGTCAAATAGCATGgacaacaacagcagctcgCTGTCGAGCTCGGAGCACGAGAAAGAAGAGACGAAGTTCGTGGTCGCGTGCAAGAGCGAAGAATCGACACCGTTCCACGACTTCGACGGTGGTGTCGCCGCAGCGTTggagaaagaagaggaaaagtGCAGCAAAAGTGGAGAGGAGAAAAAGTCAAAGCAATACGATACTTCCAAGGGGACGGATCAGTCGGCAGAGCTGCAGTCGGAGCACCAGTCGTCGggacagcaacagcagcagccgcacaaGTGTCGGCTGTGCGTTAAAGAGTTCGGTCGACTGGAGAATTTCGAGCGTCACGTTTGCAGCGGGCTACAAAACGACCAAGTCAGTGAACTCGAGAACGTCAacacgacgacaacgacgacgtcgacgaacAGCTTCAATTGCGAGGATTGCGGTCAAAAGTGCTCGACGCTGAAAAATCTCAAGCGTCACCAGTTGATACACGGCGAGCGCAAGTACTCGTGCACCGTCTGCAAGAAGTGGTTCTTCCGGGCGGACACGCTGAAGAAGCACGCCGAGCGCCATGGCCACGGACTGCTCGACAATCTAGCCGACGAGAACGAGCTCTACCAGTCGGACGAGGACAGCGACGAGATGAAGAGCCGCAAGTGCACGATCGGCGACGAGAATGCCCAGGgcGAGTACAAATGCCAGCACTGCGAGAAGATCATGGCCACGAAGAAGGGCCTGCGCCGTCACGTGGCGATGCACAAGCCCAAACCCGAGCCGGCCGTCTGCGAGGTCTGCAGCAAGGTCTGCGCCAGTCGGGCCCGCCTCTTGCTCCACCTGCGCACCCACAAGCCGAAGGACAAGCCGGCGCGCGAATATTTGTGCCACATCTGCAGCAAGGTCTACCCGAGCAACTCGTCGCTCACCTACCACATGCGCACCCACTCGGGCGTCAAGCCGCACGTCTGCAAGACCTGCGGCAGCGGCttcaccaccaccacctcgCTGGCCAATCACATGCGCATCCACACGGGCGATCGGCCCTTCGTCTGTCACGTGTGCAGCGCCGCGTTCGCGGTGAGTTCGGCGTTCAAGAGGCACCTGACTCGGCACACGGGCGAGGCCAATTACCTCTGCAAGACCTGCGGCAAGGCCTTCAAGCGGCTGAGTACGCTCAAGgagcacacgtacacgcactcGGGCGAGAAGCCCTACATCTGCAAGACCTGCGGCGCGGCTTACAGCCACAGCGGCAGTCTGTTCGCCCATCAGAAGAGGTGTCGCGCGGCCAGCTTGAACGGAGGCGCGCAATTCAACAACAACGCGCCGCCGGCCGACAACAATCTCCCTGTCAATACTCAGGACGAAAATATACCAAAAACAACATTGTTCAGGGATAAAACCAAATTAATTGATCAAGGTAAATTACCATCAACGATGTATAAAAAGCGAaataaagtagaagaagaaaagaaaagttcaCGTTTAGAAAAGGCAGTAGCAGCTTGTAAAAACGGTACTATGTCACAAAGTGCTGCTTCTGCTAGATATCAAGTACCAAAAACTACCATTTGGAGAAGgcttcaaaaatctaaaacttctaaaacaaaaaaaggtggTACATGTGAAACCAACAACATAACTTTTGTTAAGAAGGACAAACTGAGGAAGGAGATCAACAAAATTGTTAACAAGTACATTGATCAAGGAATTGCGGAGTTGGTACCAGGTGtactttttatcgatgaaGTGCACATGTTAGACATAGAAACTTTCACATATCTCCACAGAGCTCTTGAAACTGCTATTGCTCCCATTGTCATTTTTGCTACAAATCGTGGCCAATGTGTAATTCGTGGAACTGAAGATATAGTTTCCCCTCATGGAATTCCACTTGACCTTTTGGATAGACTTCTCATCATCAAAACTTTGCCTTATTCAAAACCAGAAATTGAACAAATTATCAAATTGAGAGCAGTTACAGAAGGCTTACAACTCGAAGATGATGCCCTTACAGAGCTGAGTGATCTGGGAAGCAAGTCAACTCTCAGATACGTTGTACAACTTCTGACTCCAGCTTCCTTGACCGCTAAAATCAATGGAAGAACAAGTATAAAGAAGGAAGATATTGAAGAGGTCAAGACCTTATTCTTGGATGCCAAATCATCGGCTAAAATTCTGTCACAAAATAAGGACAAGTTCATGAAATAA
- Protein Sequence
- MALSDNYFAMPMNMDRVCRICLQENTNLTPIFGNDPNLSNLTDLPQKIQICGGVECNQQDGLPSHICDVCIYKATVAYEFRQLSQHSDTRLRVFYNKPAKYSATDSETQTEHLQMITASSLLVEPQLSDLQKEYFPKVEESLSHSSFHNTMVTKDYTVQTQATDTGGVTMSVEDNSFDCHLNFVDQPHLHNHQNNGELPKEVVVGVEKSDTINDSQELLTVPLIDDMESNNKGVPYFTYEIAKEVVENMENPSNSMDNNSSSLSSSEHEKEETKFVVACKSEESTPFHDFDGGVAAALEKEEEKCSKSGEEKKSKQYDTSKGTDQSAELQSEHQSSGQQQQQPHKCRLCVKEFGRLENFERHVCSGLQNDQVSELENVNTTTTTTSTNSFNCEDCGQKCSTLKNLKRHQLIHGERKYSCTVCKKWFFRADTLKKHAERHGHGLLDNLADENELYQSDEDSDEMKSRKCTIGDENAQGEYKCQHCEKIMATKKGLRRHVAMHKPKPEPAVCEVCSKVCASRARLLLHLRTHKPKDKPAREYLCHICSKVYPSNSSLTYHMRTHSGVKPHVCKTCGSGFTTTTSLANHMRIHTGDRPFVCHVCSAAFAVSSAFKRHLTRHTGEANYLCKTCGKAFKRLSTLKEHTYTHSGEKPYICKTCGAAYSHSGSLFAHQKRCRAASLNGGAQFNNNAPPADNNLPVNTQDENIPKTTLFRDKTKLIDQGKLPSTMYKKRNKVEEEKKSSRLEKAVAACKNGTMSQSAASARYQVPKTTIWRRLQKSKTSKTKKGGTCETNNITFVKKDKLRKEINKIVNKYIDQGIAELVPGVLFIDEVHMLDIETFTYLHRALETAIAPIVIFATNRGQCVIRGTEDIVSPHGIPLDLLDRLLIIKTLPYSKPEIEQIIKLRAVTEGLQLEDDALTELSDLGSKSTLRYVVQLLTPASLTAKINGRTSIKKEDIEEVKTLFLDAKSSAKILSQNKDKFMK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01481842;
- 90% Identity
- iTF_01481842;
- 80% Identity
- iTF_01481842;