Tbra003620.1
Basic Information
- Insect
- Trichogramma brassicae
- Gene Symbol
- Mblk-1
- Assembly
- GCA_902806795.1
- Location
- CADCXV010000738.1:388483-458458[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-17 1.9e-14 53.0 0.1 1 45 1059 1104 1059 1104 0.96 2 2 2.4e-18 3.4e-15 55.4 0.0 1 43 1521 1564 1521 1566 0.94
Sequence Information
- Coding Sequence
- ATGTCTCGCGCTCTCTGTACGTGCACCGAGAGCTCACTCACACAGGCTCGCCCACGGACTACGCGcggctatatacacacatcaaCTGGTGCCCCGTGGTGGGAGGTGCATCGAGCCTCGGCCGAGTCGCGAATCCGCTGCAAGCAGTTACGGGAgcgcagcgagcgagccaacGCGCGCACCACGACGCTAATTgttgcaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaataacaacaacaaacaataATCAACaatcaacatcaacaacatTACATTTTGCAACAACTGCAACTACAAGCCAGCAAGGATCAATTGCTGCAACTGTTATCTCAATTATATTAGACATACGCGCaaatatcCTTGAACGTGTGCGCGTAGCTCCGTCGCGCGAGgcccgagagaaagagagagagagcgactcCTCGATGAATATCATGAATGTCATTTGCCACTGCAACTTGAGCAGTCGCTGCTTTATTATGGATCGAGATGAGTTCAAGTTCGACCAGCGGCTTATATACGTGCCACTCACGAGCCGCGACCAGTGCAGCTATACTACGGCGATTCTGCAGCCAGGCTCGCCGTCGTCGTGCACGGATATTATTATACGAGTTCGTCTCGGTAATATTGCATTCCATTTGTCGTGGTGTCATACCATCATATCGGGTGCTGCAAGTTGGGTCGCGATTGAAAATGGCTTCCTCTGCGTGCGATACCAAGAGGCAAGCGGTGGCGTCGGCGACGACGAAGGCTACTACTCGTGTAACAGCCCGCAGCCTGATGTATATCGCCAAGCTCCAGCCAAGGGtagtagaaaaagaaagaagagggTGGGTGAAATGAAAGCACAGCGCGGGAGAAAGAGACGAGCGCGCTGGCCCCTGCTGGTGTTCGCCGATCGAGAGCTACTGCCCGCCGCGTTGGGAAACTTTATTTTCGTCCCGGAGggcaaattttcaatgatacACGCACGAACAAAACAAACAACGCAATATTGGGCTTTTAATTCTCTCGAAAATCTTTTTGGAAACGATTGCCCTTGGCACTCTGTGAatcagataaaaaaacaaaaagtcaaCTACGCGCTCACGAAGCTGTCCATGCCCATCTGCGAGCGTGgaaagagaaagagacagactgTGCGACTACTGCCTCCCCTACACGCGCCTTCTTACCTGCTGCGCtgcgagagcttttttcagatgtcttgcACcatcctctttttctctgtctccCCCTCGAACTCTACTGCCAATACAGCTGCAGCCTCCGGAGTTTTGCACTATGAGCCGCGCGCAGTAAAAAAACGCCTCTTCGTCGTTacccatcgtcgtcgtcgtcatgatACAACTCGGCGCGCATCACCGAGCTCCGTGGGCTTCGCACTCGCTGTAGCGCAGATCTTTAatcgccgccgcagccgcacAGCTCGAACAGTATCGTTGCGCGGTCACGCACATATTATGGACGAATGGGCGAAACGACGAGAGAAATTCGTTACTCAACGCGTACATGTTTTGGGTGTTTCGGGTGACAGCCCTCCATCCATGTTTGAATGTAGTTGTATTACCATCACAGGTCTGGAGCGGGTCGCCGAGGAGTTGATGGGCCGTAGGAAATGGAAGCAATACTCGGACAATATCTACACCAACGACACCAACAATACAAGCTCCACGCCGGCGTCCGACGCggcccagcagcagctacagctcCTACAATTACAGCAGCTGGCACAGGTGAGCTCAAGCACATACTATTATAGCCGCGCATACGTAGTAACCGCGAGTGCACCAACGAATATTCAGAGGCCAACCATAAATATTCGACTCGATAAAGTTCCCAGTACGATATCGATTCAAAAGAAATGTTTACGCGGACCCGAGGTGCAGCAACAAGCAAAGCCAGCCGATTCGCCGAGTCAAACGCTGAAAGCAAACTTGGCCAATCAGTTGCAGACAACTACTATTCAGCAAAGGTCAACGGTAAGCGCGCTAACGGGAGGCGAGCCATCGCCTCTCTGCGCAGACGAAGTCGCGACGACGGGTGGCCCAGAGAACGGACGCTTGGCCGAGGTTGCCCGGGAAAACGGTGAAACGACAGGAGGCGGTGGTGGCAGCGGTACTGGCGACTCTCGACACAACAACGAGACGACCGGCCAGCACCTCGATCATCTTCTCTCCAACGAGCTTCGCGCCTCCGACGACGAGGATCAAATAAGGATCAAGCGCGAGAGACTCGACGACGAACAGAAAACGATACCTAGCCCGTTGGACAAGGATCCCAACGATTCGGAAGGGACCAAGataaaggaagaagccaactCAGAAACGACGGTCAAAGTAACGCACGGTCTACTGAGGGTgaagaaagaggaagagcTTCAAGAGACACCGGGCCCAGGTGGCGGCGCCATCGGCATCGTTTGTCCGGTAAGGCCGACCTCGACGCCTCTgcacaacaataataacagcagcaacagcaataacaacaacaacaacaacaacaacaacaacaacggtccctctgaacagctgcaagagcAACGTAGCGCCTCGACTCCGCCGAAAAAGGAATTGGTGACTTTTAACGCGGCGGCGTATGTGCTAGGCAGAAGGCCAAGTCCGCCACCAGAGGACTGGAAGCCGCTCGACAAGTGTTACTTCTGTCTCGATGGCAAGTTGCCGAACGAAGAGCAGCCACCTCTTAGTCCACGCAGCGAAAGTAGTCAAAGTTCGCGTTCGGCCGAGTCACCGATGTCTGTACAAGTGGATCCGATGGCGGCGTCGGTGGTGGCTGCCGCTCTCAGCGGTACCTACCCGACTCTGCTGCCCCAGTGGGTCTTGCGACACCAAGATGCGGCACAGATCGCCGCCGCAGCGGCGGCCGCAGCTGCGGCTGGTCACACCGAGAACTCGGGTGCCGATCAGCCACTCGATCTCTCCGCAAAGCCAAAAATTTCGgACAACAATATATCTATACTGGATCAGCAAAAAATACCTCTACGAATGGCCGCAGCTATCGATCCAAAAGCTATCTTTAACACGTGCTACAGAGCGAAGCCAAGGGCGCAGGGTGGCGGTGCAGCGGGAGGCGGCAACGCGGTGCCCGTAGCGACAGGTGGTGGAGGTGGTCGGCGCACTTATACCGAGGACGAGCTGCAGGCGGCGCTGCGCGACATCCAGAGCGGCAAGCTCGGCACGAGGCGGGCCGCCGTGCTCTACGGCATCCCCAGGAGCACCCTGAGGAACAAGGTCTACAAGCTAGCGATGGAGCGCGAGAGGGACGCCACCCTCAACAATGCCacaagcaacaacaacaacacagcCACCACCCAGAACAATTCGAGCACGAACAACAACAGCACGACTCCGACGTCAcagaacaacaacaataacaacgaggtgacggcggcggtggtgctCGCTTCTAATAGCAATAACGGGCTCAAGCACAACAGCTGTGCCGACGTCATCGCCGCCGTCGCCACTGGCACTACCACCACCAACAACTCCACTATCACCACACCAAATACCAAACGACAAAATGCCACAACCGCGAACGCGCAACTGGACGAGGTGGACGATAAAGAGCTGTCCGGagcagaggaagaaaaagaagtggAAAAGGCACTGTTGAAACCTCTGCTGTCACTCGAAGACCTCGTGCGCTTTTCGCATCTCGAAGGTGGCAGTGGTGAGTCACTCAGGGCTCTGCTACAGCGTGGTCAGACGGAGACTGGGCCTGGTGGAGCTACCAACGAGTGGTCAAGTTTCGAGCACGCTGGTATCGGACCctatttgcaaaaaatgctCGCAGCTGCTGCGCCGTTTAAAGGAATGGATCCAGAAATTATGCGTCGTCTAATGAACGAGGATCAGAAGAAGATGAACGTCAACGGGGAACAGGTACAGCATCTTCATCACGCCTCGTTACAGCATCGTCTCACGGCTGGACAAAGAGGCCCGATGACGAACGACGACTTCAATCCAACGATCGAAGACGAGGCGAGCGACAGCGGTCAGGGTCGACCCATACTCAAAATTCCGTCCTACAAGCCGGCAAGTTCCGCCGGCTCGAGCAAGAACAACGTCGAGTCGGTGGCGGCCGCGGCGTTTGCCCAACAGTTCgcggcagccgcagcagccgcGGTCGCGGCCAACGCGGTCGGGACAGCCAGTCCGGGACTGCTCGAGCGAGCCAGCCCCGCGTTCTCGGGCACGAGCTCGCCCACGAATTCGCTCATTGGCAAAGGCATGGCCGTAAACTTTCGCGACGTCATTGCTAAAAGCATAAGCAGCAAGTTCCAGGAGGGCCAGTCAGCGAGTTCCGGGCCCGCTGGCGCCGCTCAGTCGATGATCTCCGAGTCGAACCCCTATAAGCGGGGTCGGTTCACGCCACCGCACGGCCAGCCACAGGGCCAGCAGTCGAAGCAGTCGGCCGCGGCTCAGCAGGCCGCCCAGGACAAACAGAACAAAAATGCCTCGGGGGGCAAGGGCACGAGACCGAAACGCGGCAAGTACCGCAACTACGACCGAGACAGCCTCGTTGAGGCGGTCAGGGCTGTGCAAAGAGGCGAGATGAGCGTGCACAGGGCTGGTAGCTACTACGGCGTTCCACATTCCACGCTTGAATACAAAGTCAAGGAGCGGCATCTCATGAGACCGAGGAAAAGGGATCAAAAGCAGCCAGACGATAAAACGAAAGATGCACCGATGTCGTCAAGTGCGACGCTGCGTACGACGCCATCCGTATCGCCGGAGAAAAAACCAATGATAAAGTCACCACAAAGCAAGCCATTCGCACCAGCCAGTGGCGCGAACGCTGCTAGCGGGGTGCCAGGACCGAACGGCATGAAGATGCCATCCTTCATCGACGGCATGCCGCCCTTGCCGTTCGGCCATCCCTTCAACTTCTGGAGCCCGACGCCTTTCATGCCAGGCCCGACCGCTTTCATGTcgggcagcggcagcaacgtACCTGCTTTGATTCCGGAGCAGTACTTTGCGTCGCAGCGCATGCGAGGCTTGCAGGAGCAGCAACGAAACAGCGGTATgagccagcagcaacagcaacgggACGCAGCGGGCGCCACGGGGGCCTCGAGCGATCAAGAAGCTGCTGCGTCGAATGCGCGAACCAGCTCACTGATCAAGTCGCCGCGCGAAATGGCAGAGAGTCTGTACGAAGGAGGATCGGCGGTGAACGGCAGCTTCCTGGACAACCTCATCAGGTCGAGTCTGGAATCAGGCATGCCACGCGATAGGTCGCTGGCTGAGATTCGAGGTGGTAAttcgcagcaacagcagtccgAGCACCTGAGCACGTCGTCGACGGGCAGCAAGGTTCTCATTGACCAGCTCTGCTGGAACTCGAGGCCGAATCTGGTCAGGCCGATGCAGACCGACAGCTGCAGCGAGGACGAAGGTGGCAAACCCTCGAGGCCGGAACGCGTGCCTACCGTCGATTTGAGCTCGTCGCCGCGACATTGTACGGACGAGGGTAGCGATCGGGGGCTAGCCTCGCCGCCTACGCCTGTATCTCTGTCGAGGCTCAGCAGCTCGGCCAGGGATGATGAAAATTCCAGGGGTAGCCGGGAACGCGAGGTACAGAACGGAGGTGGCAGCGAAAAAGAGGACGAGCGCCCACATCGGGCCTCGAGTGACAACAGTAATAGCAACATCAGTAACTGCAACAgtagcggtggcggcggtggggGCAGCAAGAAGCTGAACCACTTTTCGGACATTACGACAACTGACAACAAGCTCATCTTCAAGAATGCCGTGTCAagcgacaacaaaaaaagtgcCTGTGATAGTAAGCTTATAGTAGATCATTCGAGCCAGCAAAAGACTCATCAGCATCAAGCCAAAAAGGATTTGGTGTTGGGAAGTAGCAACGGGCGTCCGGCCAACGCTCTCAACAGCGGCAGTAGTCCAGGTGACGAAGAgatcgacgacgaggaagagGATGACGATGGCGTTAGGTCGCCCTTACCTTTGCTGCATCATCATAACAGTCAAGAGCAAGTCTTGGTGGCTGCTTCGCCGAAGCCGCCTGTAGTCGTGGCCATGGAGAAGGCAGCCGTCGA
- Protein Sequence
- MSRALCTCTESSLTQARPRTTRGYIHTSTGAPWWEVHRASAESRIRCKQLRERSERANARTTTLIVATTTTTTTTTTTTTTTTTTTITTTNNNQQSTSTTLHFATTATTSQQGSIAATVISIILDIRANILERVRVAPSREAREKERESDSSMNIMNVICHCNLSSRCFIMDRDEFKFDQRLIYVPLTSRDQCSYTTAILQPGSPSSCTDIIIRVRLGNIAFHLSWCHTIISGAASWVAIENGFLCVRYQEASGGVGDDEGYYSCNSPQPDVYRQAPAKGSRKRKKRVGEMKAQRGRKRRARWPLLVFADRELLPAALGNFIFVPEGKFSMIHARTKQTTQYWAFNSLENLFGNDCPWHSVNQIKKQKVNYALTKLSMPICERGKRKRQTVRLLPPLHAPSYLLRCESFFQMSCTILFFSVSPSNSTANTAAASGVLHYEPRAVKKRLFVVTHRRRRHDTTRRASPSSVGFALAVAQIFNRRRSRTARTVSLRGHAHIMDEWAKRREKFVTQRVHVLGVSGDSPPSMFECSCITITGLERVAEELMGRRKWKQYSDNIYTNDTNNTSSTPASDAAQQQLQLLQLQQLAQVSSSTYYYSRAYVVTASAPTNIQRPTINIRLDKVPSTISIQKKCLRGPEVQQQAKPADSPSQTLKANLANQLQTTTIQQRSTVSALTGGEPSPLCADEVATTGGPENGRLAEVARENGETTGGGGGSGTGDSRHNNETTGQHLDHLLSNELRASDDEDQIRIKRERLDDEQKTIPSPLDKDPNDSEGTKIKEEANSETTVKVTHGLLRVKKEEELQETPGPGGGAIGIVCPVRPTSTPLHNNNNSSNSNNNNNNNNNNNNGPSEQLQEQRSASTPPKKELVTFNAAAYVLGRRPSPPPEDWKPLDKCYFCLDGKLPNEEQPPLSPRSESSQSSRSAESPMSVQVDPMAASVVAAALSGTYPTLLPQWVLRHQDAAQIAAAAAAAAAAGHTENSGADQPLDLSAKPKISDNNISILDQQKIPLRMAAAIDPKAIFNTCYRAKPRAQGGGAAGGGNAVPVATGGGGGRRTYTEDELQAALRDIQSGKLGTRRAAVLYGIPRSTLRNKVYKLAMERERDATLNNATSNNNNTATTQNNSSTNNNSTTPTSQNNNNNNEVTAAVVLASNSNNGLKHNSCADVIAAVATGTTTTNNSTITTPNTKRQNATTANAQLDEVDDKELSGAEEEKEVEKALLKPLLSLEDLVRFSHLEGGSGESLRALLQRGQTETGPGGATNEWSSFEHAGIGPYLQKMLAAAAPFKGMDPEIMRRLMNEDQKKMNVNGEQVQHLHHASLQHRLTAGQRGPMTNDDFNPTIEDEASDSGQGRPILKIPSYKPASSAGSSKNNVESVAAAAFAQQFAAAAAAAVAANAVGTASPGLLERASPAFSGTSSPTNSLIGKGMAVNFRDVIAKSISSKFQEGQSASSGPAGAAQSMISESNPYKRGRFTPPHGQPQGQQSKQSAAAQQAAQDKQNKNASGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKRDQKQPDDKTKDAPMSSSATLRTTPSVSPEKKPMIKSPQSKPFAPASGANAASGVPGPNGMKMPSFIDGMPPLPFGHPFNFWSPTPFMPGPTAFMSGSGSNVPALIPEQYFASQRMRGLQEQQRNSGMSQQQQQRDAAGATGASSDQEAAASNARTSSLIKSPREMAESLYEGGSAVNGSFLDNLIRSSLESGMPRDRSLAEIRGGNSQQQQSEHLSTSSTGSKVLIDQLCWNSRPNLVRPMQTDSCSEDEGGKPSRPERVPTVDLSSSPRHCTDEGSDRGLASPPTPVSLSRLSSSARDDENSRGSREREVQNGGGSEKEDERPHRASSDNSNSNISNCNSSGGGGGGSKKLNHFSDITTTDNKLIFKNAVSSDNKKSACDSKLIVDHSSQQKTHQHQAKKDLVLGSSNGRPANALNSGSSPGDEEIDDEEEDDDGVRSPLPLLHHHNSQEQVLVAASPKPPVVVAMEKAAV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -