Tbra000627.1
Basic Information
- Insect
- Trichogramma brassicae
- Gene Symbol
- kn
- Assembly
- GCA_902806795.1
- Location
- CADCXV010001472.1:380449-392967[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 3e-66 5.1e-62 209.9 0.0 229 335 1 155 1 159 0.99 2 3 5e-27 8.5e-23 80.4 8.6 331 452 183 300 179 346 0.70 3 3 0.00015 2.5 6.2 11.6 442 520 397 469 369 525 0.83
Sequence Information
- Coding Sequence
- ATGTTCGTGCACAACAACAGCAAACACGGACGTCGAGCGAAGCGACTGGACCCGAGCGATCCTTCGGAATACAATGAATATTCGGATAATTTCACCTCGACGCTCTCGCGTGCTCTCGGgtgtgcgcgcgatatattACATCGAATTTCGCCAAGAGCTCGTGTGCGCACATACGAACGAGCGGGGCTGTATCCACCCCTGCAAATGGCTTCGCCCTGCATAAAGGCCATGTCGCCGAGCGAGGGTTGGACATCGGGCGGCTCGACCGTCGTCATAATTGGCGATAACTTCTTCGACGGGCTTCAAGTCGTCTTCGGCACCGTGCTGGTCTGGAGCGAGCTAATTACGCCGCACGCGATGAGGGTTCAGACGCCACCCAGACAGATACCCGGCGTCGTGGAGGTCATACTGTCGTACAAGGGCAAGCAGTTCTGCAAGGGAGCACCGGGCCGCTACGTATACGTCTGTAAGTTTTTGCACAGGGCGAACGGCAGCGACGCCAACAACAACTACAACGACAACGATAATCATGCTTTAATCATCGATGACTTTGTTGATACAGCACTGACCGAGCCGACGATCGCCTACGGCTTCGAGCGCCTGCAGAAGGCCATACCGCGCCATCCGGGCGACCCCGACAAGCTGCCCAAGGAGATCATACTGAAGCGCGCCGCCGATCTGGCCGAGGCTCTGTACGGCGTGGGCGGCCGCGGTCccgtgccgccgccgcgcagTCCGGGCTCGAACGTCGGTCACTCCTCGGCGGTGCAGTCGCAGCCGCCGACCTCGACGACCTCCGGTGCGACGGCCTTCAACTCGTACTCGGGCCAGCTCGCCGTGACCGTGCAGGAGAACGGCGCGTCATCCAAATGGACCGACGGTTCGTtgaacaataacaataacaattgtCAGTTCGATCTCCAGTCGTATTACgccacgtcgtcgtcgtcgtcgtcgtcgtcgtcgcaacagcaacagcaacagcagcatcatgATTATCCCGCaacaaagacgacgacgacgacgacgacgatgaatcATCGTCTGAACAGCCAAGAACTAACCGACAGGTTATTACTTTTAGATGGCACGCAGCAGTCGGCCCAGAATGCACCGGGTAGCactggcggcggcggcggcggcagcaccGGTGGCAacaccagcaacagcagcaacggcagcgccGGTGCGCCACCGCCCGAGGCGTATCATCgccagagcagcagcgccagtCCCCGGggccacaacaacaacaacaacaacaataacaacaacaacaacggagGCTCCAACGGCTACTGCGGAGGCGGCAGTGGTTCGGCCGCGAGCACGCCGCACAGCCACAGCACCAGCTACTCCGTGGGCAGCAATCCCTACGCGGGCAGCCCGACCCTCTACACGTCTCGTAAGTCCTCCGACGAAGAGTATTATTATTCCGAAGATTTGGATCGGTCGGTCTGCTACGAAGACGTGCAGTCGTACACGCACTTTTTGGCCCAGCACAATCCACAACAGTTACAGCCACCACACAATTACATATCGGACTCTGACAGTAGCTTGATAGAGGCGCAGGCCGCCGTCGCTACGATGACGAGCCACTATCAGAGTTACGGCGGCATGCCGTGCAACAATCAGCTTTATCACACGGCGACACCACAGGCTAAGCGACTTCGTCGTCGGCTCGTCGCCCTTCAACATGagtcatcatcaccatcatcatcatcatcatcctcaTCATCATCCGTTCATGCTGCCGCCGAgttgcaacaacaacagcggtggcagcggctACGACTCGAGCAGCCTCAACGGCAGTCCCCAGCAGCTGCTGTCGCCCAACAGCAGCGTTGGCAGTGCCGGCGGCAAGTAGCCGTCGCAGCTACGAGACTGTTATATCATACCGTTTATATAATAACTTCATCATTAATTGGAGTAATACTGATGAGCCATTGCAAACTGCGTGCTCGACGTCGCCAAGCTGCGTGCTCGAGGATGCTCGTTACACGCTCCGCGAGCTCCGCTGCTCGCGGCTGCACTCCGCAATTCGCTCGTGTACGCCACTACAACGCTAATTTATCATTCGCGCACAGCGTTATTATAATCTTGTTATTTTCATGCATCTCCTAA
- Protein Sequence
- MFVHNNSKHGRRAKRLDPSDPSEYNEYSDNFTSTLSRALGCARDILHRISPRARVRTYERAGLYPPLQMASPCIKAMSPSEGWTSGGSTVVIIGDNFFDGLQVVFGTVLVWSELITPHAMRVQTPPRQIPGVVEVILSYKGKQFCKGAPGRYVYVCKFLHRANGSDANNNYNDNDNHALIIDDFVDTALTEPTIAYGFERLQKAIPRHPGDPDKLPKEIILKRAADLAEALYGVGGRGPVPPPRSPGSNVGHSSAVQSQPPTSTTSGATAFNSYSGQLAVTVQENGASSKWTDGSLNNNNNNCQFDLQSYYATSSSSSSSSSQQQQQQQHHDYPATKTTTTTTTMNHRLNSQELTDRLLLLDGTQQSAQNAPGSTGGGGGGSTGGNTSNSSNGSAGAPPPEAYHRQSSSASPRGHNNNNNNNNNNNNGGSNGYCGGGSGSAASTPHSHSTSYSVGSNPYAGSPTLYTSRKSSDEEYYYSEDLDRSVCYEDVQSYTHFLAQHNPQQLQPPHNYISDSDSSLIEAQAAVATMTSHYQSYGGMPCNNQLYHTATPQAKRLRRRLVALQHESSSPSSSSSSSSSSVHAAAELQQQQRWQRLRLEQPQRQSPAAAVAQQQRWQCRRQVAVAATRLLYHTVYIITSSLIGVILMSHCKLRARRRQAACSRMLVTRSASSAARGCTPQFARVRHYNANLSFAHSVIIILLFSCIS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -