Tbra014343.1
Basic Information
- Insect
- Trichogramma brassicae
- Gene Symbol
- JARID2
- Assembly
- GCA_902806795.1
- Location
- CADCXV010000781.1:33029-42101[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.1 1.2e+04 -3.3 0.0 69 82 142 160 129 161 0.65 2 2 6.4e-22 3.6e-18 65.7 0.0 6 89 1538 1619 1534 1619 0.94
Sequence Information
- Coding Sequence
- ATGGTTTTAAGCagaaatgataaaagaaagaggaagGAAGGAGATATTGTGGATCTCATGGATCCACTTGCACAAGGTCCTAAAagGACAAAATTTCAAGCACAAAGAAAATTTGCATCGGTTCAATGTAGTCCAGTTGTATCACCTGCAAAAGAGCCACAAGAAAAGACAAAAGGTCAACCTGTTTGCAATGAATTAATAACGCATAAAAGGCCTAATACAGCAGATTTTCTCACATTCCTTTGTTATAGagcccaaaaaaagaaaaatctcaaaattcTGCCAAGTCAGCAAATTCATCCAAAGTCAGTACTGCCAATTCTAAGCAAACAAACTCAACTAGTGTTACAAGTTCTTCTGCAAAAAGTAGTACCTGTCAAGGAGAAACCTgtagcaaagaaaaaagatgtgAGCCCTCCAAAACCAATAAAGCTCAAAACAACAAGTACTGCTGCGCAAgcattgaagaaaaaatatcaagagCAGAGACTGAAAAAGCTGAAACCAACTAGTATGAAAACCCGCTCTAGAGGTTCTTCTGATCCACCAAAACCCATAGCCAAATCAGTTagtcaaaaaaaagtagtCATTCCTAAAGTTGTAAAAAGACACTCACTTCGAAGTAATGTATCACTGGAAACAGAAGCTGTAAGTCCTCCTGTGAAAAAACAGTCAGTTTCTCAATCCAAAAAAAGATCAtcaaattcaaaagaaaatgatgattCTGAGTCTTCCTCgcctaaaattgaaaaagaaaccaAAAtagaagaagaaaagagagtaaCTCGATCTGCTCCAAGACCTGTATCACCAGCAAGAAGACCTACAAGAAAAACTAAGGAAGCTGCAGCAATTTATATGGAGATTTTAGGTAGAAAACTAGTTGGTTCCGATTTAGAGAACGAAGACAATATGTCGGTTGATAGTTTCCCTGAATTGCCAAATGCCAGAAAAACAGCACAAACTGAAAATgaactgaaattaaaaaatagggGTTCAAAATCTAGTAAGGATAAGGAAAACAAGAGCGTCATCAGTGGAAGAGTAGCAAAACAGAAGCCTTCCCCTGGCGTATCTCTTCGAAACAAACGTTTGACGAGGGAGCAAATCAGCGAAACCATTAACGATTCTAAAATCGCGAAGCGAAAGAGTCTCGGCTCGGTTTCACCTCTAAAATCGAAGCGCACGGCCAGGGTGCACAAGTATTGCGAGCTCGAcagcgaggacgacgaggaatCGTTCACTTCCGAGGAAACGAGCAGCGCAGCGACGCCAGCCCCGAAGCCGGAAGTTATCAAGACTCGAAAATCGGCCCCGGCAGCTATCCCTTCCACCGACGCGACGGATAATAACAAAAAGaaggagacgacgacgactccgcGCTCCTCTCGAAGCAGTATTACGTCCAAGAAAGCGACGACCGTCGCCGCCGATGCCTTCGCGAAACCGGCAAAAACGACGACgggaacagcagcagctgcggcGGCGCCAAAGGAGACGGCGAAGGAGACGGCGAAAGCTACCAAAGACAACAAGCCTAGCCCGGTAAAACGTAGCAAGGAAAAAGACAAGGAGAAGGCGAAAGCCAAGAGCACCGCCACCGCCAAAGCCTCGGAGGAGTCCGAGGAAGAGGAGAGCCTCAGCTCTTTGATCGACAAGctcaataagaaaaaagagagtgaaaagACAAGCAGCCCCGCTGCTACGGCGGCTTCGGCTGGCGGCAATAAAGAGACCATCGCTcaggagacgacgacgaagaagataAAGAGCATACTGGACGTGAAACTGCCTCAGCGCGGCGCCGAGCTGATGAAGAAATTCGTctccgacgacgaggagtcgTTCCGGGGCTTCACGCAGCGCTCGATCAACGGCGCCCACGCCCTCCTCGACGAGGCCATCGGCACGAAGAACCCATCCATACTGAAGACGCACGAGGCGATGAAGGCCCAGGAGACGAACAAGAAGCCCGACATGAAGGCCGTGTTCGGCTGCGTACTCGAGCCAATCGCAGCGGCAGCCGAgaaggtcgtcgtcgtcgggtcgTCTTCTTCCTCTCCTACGACGTCAGCCGCCAAATTAGCACcgaaagcagcagcggcggcggtaggAACGAGCAGCAACAATGCCATAATCGTCGGtaaccaccaccaccaccaccaccccgTGAAAGTGGAGTCCGATGAAGCGACGAAGAGCATGAGCGACGCGTtgctgccgcagcagcagcagcaacagctgaAGcCGCAGTCGAGATGCGTCGGTTCGAAGCTGACGTCGttgacgactacgacgacgatgcccaattgcggcggcggcggcggcggcgcaccAGCGGCGAACGTCATCGAGATGCCGTCGTccatgacgatgatgatgatgtcgAGTCACCACGGCCATCGCAAGGAGCGCGTCAACATGTCGACGGAGCAGATCGAGAAGTGGCTGAACGAGTCGTCGCTGGCCAAGGAGGAGTCCAAGGTCGAGATGGAGAGCGTCGCGTCGTCGTTCAAGTACGAGCCGCCGCCGATCACGACGGCAACGGCCACGTCGTCATCCTCGTCGTCGGCCATCGCGGCTTCGCTGCCCAGcaataatcatcatcatcatcatcatcatcatcgtcagcatcatcattatcatcaacGTTATCATCAACCACAACAACCACAacaaccaccaccaccatcaccgCATCATCAGCACGTGCACTCGCTGCCGATCGTCACGACCGGCCACCATCTGTCCATCTCGCCGAGGATACAGCACCTCGTGCGTCCGGTCAACGTCACCCTGTCCAAGCTCTCGGACAGACTGAAGCATCAGCAGCCACCGGTATCGGCCGCCGCCACAggctcctcctcctcgtttTTCGGTAGATCCACGTCGACGGCGACGATCGGCGGAAAGGTTACAGCCGCGGCCGCGGCCACGGccacgactacgacgacgtcgacgaccgCCGATTCGAGCGGCAGCATCAAGTCGCTCTCGACCGTGGCGTTAACGTCAACGaccacaacgacgacgacgacgacgacgaagacggcGATGGCGAAGCCTgccagcagcagaggcagcagcaaagAGACGACGCCCACCACGACCAACGCCGCCTCGTATCAGAGAAAGATGAGCAAAGACTCGTCGTTCGGCGACGAGCTCGGTGGTATCGCGAGCGATAAGAAGCACGCGTCCACGGACCAGGCCAAAGATGCCACCGTCGCCAAGAGGAGCGCTGACTCGAAGATGACGGCATCAGCAGCAGGAAAATCGAGCAAGCATTTAAACTTGCCGCAGGAAGCTCGGAAAAGCgcggcgagcagcagcggcggcagcaactCCCAGCCGCAGCCGACTACTCCCAAAACATTCGAGCTTCCGAAAAATTTCGCAGATCTGACCAACATACAGGTGTTACCACTCGACAAGCTAACAACAAGCTGGAGCGACGTAAACTGCAGTGCCTCGATTGCTGTCCAGGTGAATCTGGACCCGCAGCTgcaaaaaagcgaaaaaagcagcagcagcagcagccacgccGTCGAGGcagcggcgtcgtcgtcgacgtcgtcggcggcggcaagCGTCAAGAAGAGTCTCGGGGCTGCGACGTCAAAGCCGTCGACGAAGGGCAGCAGTTCTACAGtcaccgccgccgtcgccgggGCAGGCCGAGAAAagacagcagcggcagctgaCAAAAGCTCGACCACGTCGTCGTCCCGAACGCCACCAAAGTCGTCAACGATAGCGGTCGTCGACCAGAGCGAGGACCAGACGAcgacggacgacgacgacaacagcAGCGGCCAGCTGTTCTACATACCGCTGCAGGCGGTCGCGCGCAACTGCTCCGCACAGGGCGGACAACAACTCATCCAAGGTGTTGCTGTGAAACTGGGCACTGAGGGCCCCCAGGGGCCCAATCAGAAGGTCCTGCTCAAGGCCAAGCTGGTGACCAAGCCGCCCGTGACGGTGGCGCGCTGTCCGCCGATCGGCACGGTGCAGCCGACGGCGAGGGTCACCCAGTCGAGCGGTAGTCAACAACAGGTGCCCTCGACCTCGAGCGTCGGCGTCGCGGCGGCTgctgccaccaccaccaccaccaccaccaccgacgCGGGCTTCAAGACGCCCAAAGACAGAGTCATGAAGACGATCGTCGACAGCAAGCGAATACACAAATCTCCGACTCCGGAAAAACTCGTAAAACCCACCGGCAAGACTGCTACGAGCAGCGGCGTCGAGCGCAACAAAGTCCCGGCCGACGGTGCGAAAACGTCGAGCTCGAAGAAGCCGTCGTCGAAAACGAAGACGGACCACTATCAGCCGGTGAACGCCACGTCGTTCCCGTGCACACAGGACTCCAAGGAGAACGTGAAACTGGTCGAGGCGCCGATCTTTCGCCCGAGCGAGAAGGACTTTCAGGATCCGCTCGAGTACATCGACAAGATCCGGCCGATCGCCGAGAAATTCGGCATCTGCAAGGTCGTGCCGCCCGCCAACTTCAAGCCCGAGTGCAAGGTTTCGGACGACATGCGTTTCACCGCCTACAATCACTACATCCATCGCATGCTGAATCGCTGGGGGCCGAACGTGCGCGAGATGATGGCCATCAAGAAGTACCTGGCCACGCAGAGCATCAGCCTGACGCAGGCGCCCTGGATCGGCGGCATGGAGGTCGATCTGCCCTATCTCTACCAGACGGTCCAGACGCTGGGCGGTCTGAAGGAGGTCATCGAGAAGAAGAAGTGGCAGAAGGTCGCCGACGGCATGAAGATACCGCGCtcggcgcaggatcgcgtcaccAAGATCGACGACATCTACTGCAAGTATCTGCTGCCCTACGATACACTGTCGCAAGgcgagagagaaaaactatTCAAGGAAGTCGAAGCCGATTgggtgaaaaaagaaagcaggGCCGAACGCCGATCTAACGATGAGTctgacaacgacgacgacgacgatgacgacgacgacgacgatagcAGCAGCGAAGAGATCGAAGAATGCATCGTAAAAgGCCGCAACATGCCGCTGAACGCGTTCTATCGGATAGCCCGGAACACGCAGCGCATGTGGTTCGGCGAGCGCCAGTGCAGCCCGAGCGGCGAGTCGGAGGGCGCCTCCGCGGCCGAGGTCGAGGCCGCCTTCTGGAAGCACGTGGTGGAGAAGCGCCGCCACGTGTGCGTGCACGCCGCGTCCATCGACTCGGGCGGCCGGGGCTTCGGCTTCAGCCAGGCCAAGAACTCGCCGTTCGCCCGCCATCCCTGGAACCTCAAGGTGCTGACGAACAACGCGGGCTCGGTGCTGCGCGCCCTCGGGCCCCAGATGGGCGTCACCGTGCCCACCCTCCACGTGGGCATGGTCTTCAGCACCTGCTGCTGGTATCGCGATCCGCACTGTCTGCCCTGGATCGAGTACCTGCACACGGGCGCCAAGAAGATCTGGTACGGCATCCCCGACACGGAGAGCGAGGCGCTGCGCGACACGTTGGCGCGCATGTTTCCGCGCTACTGCAAGAGCACCAAGATCTGGCTGCCCTCGGACACGGCCATGGTGCCGCCCGACATGCTCGTGCGCAACGGCGTGCCCCTGTGCCAGACCGTCCAGGAGCCCGGCCAGTTCATCGTCGTCTTTCCCAAGGCCTTCACCTCGAGCATATGCACCGGCTACGTGGTGAGCGAGAGCGTCTACTTCGCGCACCCGTCGTGGCTCGACACGGCCGAGCAGGTCTTTCAGGATCTGCACGACAGCTGCGAGCCGTCCATGTTCTCCTTCGAGAAGCTACTGTTCAGCATTATCAACGATGCCAAAACTAGTACCGATGTACTTAGACAGATTTTACCCAGCGTCAGTAGAATTTATAACCGAGAGGTCGAGAATCGCAGAAAGCTCAAAGAGTTGGGCCTTACGAAGACGGAAAAATTGCCCCTGCCCGAGAACGACAAGAAAGCCAAGAAGAAGGCGCTGCAGGAGGAGGCAGATTACGAGTGCGACACGTGCCGAGCCAACCTGTACGTTTCCTGCGTGAGCAATCCCACGGAGGAGGCCATATTCTGCCTGACCCACGCAATACCCTACATAGAGAGGAAGAAGAGCGTACTGAAAAATTGCACCCTCATCTATACTTACAGCGAGGTAAGGATTTAA
- Protein Sequence
- MVLSRNDKRKRKEGDIVDLMDPLAQGPKRTKFQAQRKFASVQCSPVVSPAKEPQEKTKGQPVCNELITHKRPNTADFLTFLCYRAQKKKNLKILPSQQIHPKSVLPILSKQTQLVLQVLLQKVVPVKEKPVAKKKDVSPPKPIKLKTTSTAAQALKKKYQEQRLKKLKPTSMKTRSRGSSDPPKPIAKSVSQKKVVIPKVVKRHSLRSNVSLETEAVSPPVKKQSVSQSKKRSSNSKENDDSESSSPKIEKETKIEEEKRVTRSAPRPVSPARRPTRKTKEAAAIYMEILGRKLVGSDLENEDNMSVDSFPELPNARKTAQTENELKLKNRGSKSSKDKENKSVISGRVAKQKPSPGVSLRNKRLTREQISETINDSKIAKRKSLGSVSPLKSKRTARVHKYCELDSEDDEESFTSEETSSAATPAPKPEVIKTRKSAPAAIPSTDATDNNKKKETTTTPRSSRSSITSKKATTVAADAFAKPAKTTTGTAAAAAAPKETAKETAKATKDNKPSPVKRSKEKDKEKAKAKSTATAKASEESEEEESLSSLIDKLNKKKESEKTSSPAATAASAGGNKETIAQETTTKKIKSILDVKLPQRGAELMKKFVSDDEESFRGFTQRSINGAHALLDEAIGTKNPSILKTHEAMKAQETNKKPDMKAVFGCVLEPIAAAAEKVVVVGSSSSSPTTSAAKLAPKAAAAAVGTSSNNAIIVGNHHHHHHPVKVESDEATKSMSDALLPQQQQQQLKPQSRCVGSKLTSLTTTTTMPNCGGGGGGAPAANVIEMPSSMTMMMMSSHHGHRKERVNMSTEQIEKWLNESSLAKEESKVEMESVASSFKYEPPPITTATATSSSSSSAIAASLPSNNHHHHHHHHRQHHHYHQRYHQPQQPQQPPPPSPHHQHVHSLPIVTTGHHLSISPRIQHLVRPVNVTLSKLSDRLKHQQPPVSAAATGSSSSFFGRSTSTATIGGKVTAAAAATATTTTTSTTADSSGSIKSLSTVALTSTTTTTTTTTTKTAMAKPASSRGSSKETTPTTTNAASYQRKMSKDSSFGDELGGIASDKKHASTDQAKDATVAKRSADSKMTASAAGKSSKHLNLPQEARKSAASSSGGSNSQPQPTTPKTFELPKNFADLTNIQVLPLDKLTTSWSDVNCSASIAVQVNLDPQLQKSEKSSSSSSHAVEAAASSSTSSAAASVKKSLGAATSKPSTKGSSSTVTAAVAGAGREKTAAAADKSSTTSSSRTPPKSSTIAVVDQSEDQTTTDDDDNSSGQLFYIPLQAVARNCSAQGGQQLIQGVAVKLGTEGPQGPNQKVLLKAKLVTKPPVTVARCPPIGTVQPTARVTQSSGSQQQVPSTSSVGVAAAAATTTTTTTTDAGFKTPKDRVMKTIVDSKRIHKSPTPEKLVKPTGKTATSSGVERNKVPADGAKTSSSKKPSSKTKTDHYQPVNATSFPCTQDSKENVKLVEAPIFRPSEKDFQDPLEYIDKIRPIAEKFGICKVVPPANFKPECKVSDDMRFTAYNHYIHRMLNRWGPNVREMMAIKKYLATQSISLTQAPWIGGMEVDLPYLYQTVQTLGGLKEVIEKKKWQKVADGMKIPRSAQDRVTKIDDIYCKYLLPYDTLSQGEREKLFKEVEADWVKKESRAERRSNDESDNDDDDDDDDDDDSSSEEIEECIVKGRNMPLNAFYRIARNTQRMWFGERQCSPSGESEGASAAEVEAAFWKHVVEKRRHVCVHAASIDSGGRGFGFSQAKNSPFARHPWNLKVLTNNAGSVLRALGPQMGVTVPTLHVGMVFSTCCWYRDPHCLPWIEYLHTGAKKIWYGIPDTESEALRDTLARMFPRYCKSTKIWLPSDTAMVPPDMLVRNGVPLCQTVQEPGQFIVVFPKAFTSSICTGYVVSESVYFAHPSWLDTAEQVFQDLHDSCEPSMFSFEKLLFSIINDAKTSTDVLRQILPSVSRIYNREVENRRKLKELGLTKTEKLPLPENDKKAKKKALQEEADYECDTCRANLYVSCVSNPTEEAIFCLTHAIPYIERKKSVLKNCTLIYTYSEVRI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01484430;
- 90% Identity
- -
- 80% Identity
- -