Tcas010486.1
Basic Information
- Insect
- Tribolium castaneum
- Gene Symbol
- pnr
- Assembly
- GCA_000002335.3
- Location
- NC:10445844-10466516[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.7e-17 7.8e-14 50.5 4.2 1 34 385 417 385 419 0.98
Sequence Information
- Coding Sequence
- ATGTGTAATGTACCGCCAAAGTTTTATCAGCTCTGTCGTCTTTGTTTATCGGTAGATAAGGATGGTGTCGGGATTTTCGAGGATGCAGGCGCCCACGACGACCTCCCGGCCAAGATAATGACGTGTCTCTCCATCCTGGTTGCCAAGAGCGACCCTCTGCCGCACGTCATCTGTGTGAGATGCATCGAACAGCTCGAAGCTCTCTACAGGTTCAAAGAGGTCGCCCGGAAAGCCGAAGACCTCCTCAACCAATTCCTAACGTATACGAAGCAGCTGGCCGGAACAGCAGAGGAGAGGATGAAGCGCTCGAATGCCGTTCTGGAGTCGATGATGAACGCCTCCACAATCCTAAAAGCCGAAGATACACCCAACAGTATTACAATCAGTCTGAGGACGGAACCGGAGTCGGCGAAAGAGGACCAAAACCCGCACACAACCGAACCAACAGACTTACGATATCCGCCAGATAGCGAACCGAACAGTATACCCTCGCCATCGATAGCACCCAGCTTCGGCGAGGGGGCGATGCAAATCGACGACTGTCCCAACCAGCCGGCCGACCTATCGAACAAGAAACCGGAGAACCTCACCTGCGTGCCGGAAATCGATTTCATCAAAGAGGAGGTGAACGACAACGCCTCGGACTACAGCAACAGCTCGGACCCCGAGCGGCTGGAGGTGGACATGTCGCAGGGCGTGGAGGAGCATTCCAATTCGACGACGGCGAGCGCCACCTCCCCCGTCCCCGACAACGTGCAGCCCGACGAAGAGGCGTCTTTGTGGCGCGCGCTGTCCCACAACGGCTACAACCCCAACGTGCCCTTGAGCGGCGAAGCCAGCCAACTACTCAGGAAACTGATAACGTGCCGAAAGCTAGGCATGAGCATAACCCCAGCACCTCCCTTCGTCCTCGACGGCCGAGTCAGCTCCCCCAGCGAACCCCTCAACATGGAAACCAACCCCAAGCCGTCGACGGGCCGGAGAAAACAGAGTTACCCCACCAAAGCCTCGATCGAGGACTCCAGGAGTCCGGCCCGCGACGACGGCGAGGACTACATCCCGGACTTCACCGGAAACAGCCCCTGGTGCAACCTCCAGATCGTGAAAGGGGGCAAAGGGGGCGCCGGAATGGCGCGACGGGTCGATCTCTCGTGCACGAATTGCGGGACGCAAACCACGACCATCTGGAGGAGGAACATGAAGGGGGAAATGGTCTGCAATGCTTGTGGGCTCTACTACAAGCTCCACGGCATTGATAGGCCGCATACGATGCGAAGGGACACGATCCACACGAGGCGCAGACGTCCCAAAGCGGCCGAAGCGCGGAACGAGAAGGACAAGTGCCGGGAGTACCCGACTATCAATAATCAGTTTAAAGCGCCGAAGAAGGGGCACGGGAACGCCGAGACCGCCGACACTGAAGACATGTTGAGCGCGCTGCGGCGACAGATCCAGCCCCACTTGGTGATGGCGTTGCAGGGACACAAAACCACCGCCTATCCTCACTTACAAGCAGCCAATTTTGCCCATTTCTTGCCGACGAGCGGTTCGCCGGGGGGCTCCGCCCCCGAGGTGGAGTCCGACGAGGAGAGTATAGCGGACTTGCCACTAAACCTTGTCTCGACTCAAATGACGGAAACGGAAAGTCATTGA
- Protein Sequence
- MCNVPPKFYQLCRLCLSVDKDGVGIFEDAGAHDDLPAKIMTCLSILVAKSDPLPHVICVRCIEQLEALYRFKEVARKAEDLLNQFLTYTKQLAGTAEERMKRSNAVLESMMNASTILKAEDTPNSITISLRTEPESAKEDQNPHTTEPTDLRYPPDSEPNSIPSPSIAPSFGEGAMQIDDCPNQPADLSNKKPENLTCVPEIDFIKEEVNDNASDYSNSSDPERLEVDMSQGVEEHSNSTTASATSPVPDNVQPDEEASLWRALSHNGYNPNVPLSGEASQLLRKLITCRKLGMSITPAPPFVLDGRVSSPSEPLNMETNPKPSTGRRKQSYPTKASIEDSRSPARDDGEDYIPDFTGNSPWCNLQIVKGGKGGAGMARRVDLSCTNCGTQTTTIWRRNMKGEMVCNACGLYYKLHGIDRPHTMRRDTIHTRRRRPKAAEARNEKDKCREYPTINNQFKAPKKGHGNAETADTEDMLSALRRQIQPHLVMALQGHKTTAYPHLQAANFAHFLPTSGSPGGSAPEVESDEESIADLPLNLVSTQMTETESH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01410452;
- 90% Identity
- iTF_01481353;
- 80% Identity
- -