Basic Information

Insect: Tribolium castaneum
Gene Symbol: DCPS
Assembly: GCA_000002335.3
Location: NC:8614354-8624380[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 5.3e-06 0.00031 20.5 4.2 1 23 176 198 176 198 0.97

2 17 3.5e-06 0.00021 21.1 0.4 1 23 204 226 204 226 0.97

3 17 4.7e-06 0.00028 20.7 0.2 2 23 233 254 232 254 0.97

4 17 1.7e-05 0.001 18.9 4.0 1 23 260 282 260 282 0.99

5 17 5.3e-07 3.1e-05 23.7 1.4 1 23 288 310 288 310 0.98

6 17 3.2e-07 1.9e-05 24.4 1.9 1 23 316 338 316 338 0.99

7 17 4.1e-06 0.00024 20.9 0.0 1 23 344 366 344 366 0.98

8 17 0.00019 0.011 15.6 4.0 1 23 372 394 372 394 0.98

9 17 0.0018 0.11 12.5 1.1 1 23 400 422 400 422 0.96

10 17 1.9e-05 0.0011 18.8 2.6 1 23 428 450 428 450 0.98

11 17 0.00045 0.027 14.5 2.2 1 23 1262 1284 1262 1284 0.98

12 17 0.0017 0.1 12.6 1.7 2 23 1289 1310 1288 1310 0.95

13 17 4.2e-06 0.00025 20.9 2.2 1 23 1316 1338 1316 1338 0.98

14 17 1.9e-05 0.0011 18.8 0.4 1 23 1347 1369 1347 1369 0.97

15 17 1.8e-06 0.00011 22.0 0.1 3 23 1377 1397 1375 1397 0.96

16 17 5.6e-08 3.3e-06 26.8 1.9 1 23 1403 1425 1403 1425 0.99

17 17 1.1e-05 0.00064 19.6 0.4 1 21 1431 1451 1431 1452 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	5.3e-06	0.00031	20.5	4.2	1	23	176	198	176	198	0.97
2	17	3.5e-06	0.00021	21.1	0.4	1	23	204	226	204	226	0.97
3	17	4.7e-06	0.00028	20.7	0.2	2	23	233	254	232	254	0.97
4	17	1.7e-05	0.001	18.9	4.0	1	23	260	282	260	282	0.99
5	17	5.3e-07	3.1e-05	23.7	1.4	1	23	288	310	288	310	0.98
6	17	3.2e-07	1.9e-05	24.4	1.9	1	23	316	338	316	338	0.99
7	17	4.1e-06	0.00024	20.9	0.0	1	23	344	366	344	366	0.98
8	17	0.00019	0.011	15.6	4.0	1	23	372	394	372	394	0.98
9	17	0.0018	0.11	12.5	1.1	1	23	400	422	400	422	0.96
10	17	1.9e-05	0.0011	18.8	2.6	1	23	428	450	428	450	0.98
11	17	0.00045	0.027	14.5	2.2	1	23	1262	1284	1262	1284	0.98
12	17	0.0017	0.1	12.6	1.7	2	23	1289	1310	1288	1310	0.95
13	17	4.2e-06	0.00025	20.9	2.2	1	23	1316	1338	1316	1338	0.98
14	17	1.9e-05	0.0011	18.8	0.4	1	23	1347	1369	1347	1369	0.97
15	17	1.8e-06	0.00011	22.0	0.1	3	23	1377	1397	1375	1397	0.96
16	17	5.6e-08	3.3e-06	26.8	1.9	1	23	1403	1425	1403	1425	0.99
17	17	1.1e-05	0.00064	19.6	0.4	1	21	1431	1451	1431	1452	0.94

Sequence Information

Coding Sequence: ATGGACAGTAGCCTAAGTATCAGCAATTTCAGCAACATTTGTCGCACTTGTCTTGTTGAAAATGTTGAACTGAAAGATATTTTCAGTTCGTCTGTAGACAAGTTGTTGAAAGAATGCACCTCAATACAGCTTCAATCTGGAGACGGTTTACCAGAATTTATTTGCGAGACATGCATAAACAAAGTCAGTGAGGCATATTCCTTTAAATTACTATGCGAAAGCAGCGACCAAACTCTCAGAAATATTCTGCAAAACTCTGTGTTAGATGACGATAAGGAAGAAATGGGCATTTTGGAAAATTATGATGACTGTAGCAATGCTGATGATCCTGTACTTGAAACAGTCACTGATAAAGAATATTTCACCAATTCTCAAGATAATCTCAATGATCATTCCTACTTTGCCGAGGTTAAAGTTAACACGTTAGATGAATTAGAAGACATTGAGTGCAAGTTATGTGGTCAGACCGTACCAAAAAACCAAGAAAAAAGCCACATGGAGTCGTGCCATATCGGCGATAATTACCACATTTGCAACAAGTGCAAAAAAGAATTCACTGATGTCAAATTACTGAAAAGGCACATGAGGACGCACAAGTTGAAGAAAAACCACAATTGCCCCACCTGTGGAAAAAGCTTTTACGGCGCTAATGACCTAACAATCCACATCCGGGTCCACACTGGCGAAAAACCCCTAACTTGTACAGTTTGTTCCAAAGCTTTTGCCGACCCCAGAGGCTTGAACAGCCACATGAAGACCCACACTGGCAAAAAACCGTACACTTGTAACACCTGTGGCAAAAGTTTTGCCCACTCTTTTGTCCTCACAACGCACAAAAGGACCCACACTGCCGAAAGGCCGTACGTGTGCTCCTCCTGCGGCAAAACTTTCATTTACTCGCATAATTTGGCCATTCACATGCGGTCACACACGGGGGAAAGACCGTACCAGTGCCAGCAGTGCTACAAATCGTTCAGTTCAAGTTCCACACTTTCCGCTCATATGATGACACACACGGGCGAAAAGAGGTTTGTTTGTAGCGTTTGTGGGAAAAAGGTTGCAAGGTCGGGGGATTTGGCGATACATATGAGGATACACACAGGGGAAAGACCTTATTCTTGCAATTTGTGTTTTAAGCAATATAGGATGTCGTCTCATTTGTCAGCGCATATGAAATCGCACACGGGGGAGAAAAATCATATATGCAACACGTGTAATAAGGCATTTAGTAATGCGAGGATTTTAAGCTCGCATATGACTATTCACACAGGGGAGAAACCGTACACGTGTGCAGTTTGCAACAAGTCGTTTGCGCATTACAGTTCCTTGTCGACTCATCGAAAAATTCATATGCACGACAAAAACCAGAAAAAGGAGAACATCTCCCGATGTTTCAATTACAGATTAAAACTTAACTGCAATTGTCTGGTCGACTGTAATGTTCATGGTGCCTGCACCATTTTTGGTGCTATCTTCACCGATATTAAAATGGCCACCTGCGATGGCGTCATCGATTGTTCACCTCCCAAAAAAGCAAAATTGGCCGAAAATTCCGAAAAATGTAACGACGGCATTCACGAGACCCTCGCAGACTTGTCATCATTTCAGTTAGAAAAAGTCCTGCACAACAATACCAACAGAAAGACCGTGTGCCTTAAAGGAAAGTTTGCCGCGAAAAATGGGGACGCGTTAGTGCTCCTAGAGAAAACAGCTTTTGCCGAGGAGAACCTCACAGGGGACAGTGACTACTTCACGAAGGCGAGTTCCTTGGAGAAGGTGTTTCATAACGACATTTACGGAAATTACAACTATTTCCCGAAAATTAACCTCAACACGGTTAAAGCCACGATTATTCATCCGGCCACCGAAGAGCATTTCTTGAAGTACTCGCAACAGAATTGTCGCATCATTGACGAAACCCCCGAGATTTATGAACAAGTCGTCTTGCCCCAAATCACCTCGGAACAGTTTGATTTAAACTGGGTTTACAACATTTTGGAGCACAAATCAGAGTCTGATCGGATCGTGTTTGAGGACTCGGACCCCAACACAGGCTTTATTTTGCTACCTGACTTGAAGTGGAACGGTGAAGTTGACACACTTTACTTGCTAGCAGTTGTCCACAAACGTGGGATTAAATCGTTGCGGGACTTAACAGGGTCCCATTTGCCACTACTCAAAAATATACAAAAGAAGGGCATTGAAGCGATTAAATCGAAGTATGGGCTTGATGGCAACCAACTGAGAATCTATCTGCATTATCAACCATCATTTTACCACCTGCACGTACACTTTACTTATATCAAACATGAGGCGCCTGGAATTCTGGCCGAAAGGGCGCACTTGTTAGCAAACGTGATAAGTAACATTGAGCTGTTACCAGATTATTACCAAAAAGTCACTCTACCGTTTGTCGTCCGCGAAAACGACAAGTTATACAAAAAACTCAAATCCGTCAACGTCCTAATCAACTTGATATCGCCCCTCGAGGTCAGCAAAATATCCCTCAATGAGGACAGTTTCCAGATAATTGTGGACGAACACGTCCACACTGTTTCTTGCAAAAATTTAAAAATTGTGGTAAATTCGTTAAGCTCGTTGATTGTTACGCAAACTTACATTTCGTTCCGTTTTGCCACTGTTAACAGTTCGGACGACTGGGGCAGTTTCAAAACGGAGGTTTTAAAAACCGCAGGTTCAAATGTGCCCACAAACCTCCAAAATATTTTTCTAAAAGTGGCAGTACCTTACGTACTTCAGTGTAAAAATTGTTCGCAAAATTTGAGCGAAAATGTCAAGTTCGAGCGCGTTTTGCCCCTACCGTCGGAGAATTCCGACTCAAGTGACTGGTTTTGTCACTCGCATGGGGGCTCCAATGTTGCTGTTTTAAATCCGAAAGAAACCGATGTTTTTTATGGCTCTTGTTACTGTCATTTAAGCAAACCATTGGTGAGGAATGTGATAGAAAGTGAGAAAGTCGTGGTTTGTAAGAGGTGTCTCTCGTGGTTAGGGCTTTTGAAAATTTCCGAAACCTTCAAATTTTGGTTTAACACAGTCGCGTTCAAGGACGGAAGTGTAGTTCATAGTACGTCGCCACTTGGTGATACTTTTGCTGCTTTAAGGGAGGTTCTGAACAGCATTCTTTTCAATACTGCGAAAATTGTTCTTTGTTGCCAAAGCGGTAAAAAACAAAACGATTACATCCTTCTCTGGATTTTGGAAAAACAGTTAAATGTACAGCTTGGCGTGAAAGATTGTAAAGTGGCCAAAGTGTTGTTTAAATACGAAAATAACAAGAACGAAATTGTTAAAAAGTGGATGGAAGACAGCAATGTTCTAGATTTTAATTCCGTTTGTCGCACTTGTTTACAAAGTGAGAGTAATTTAACGCCTCTGCATCACTCAAAAGCCGCTGAAATGCTAATTTATTGCAACTTCTGCAAAGTGTGTGAGGACGATGGCTTTCCTGACAAAATTTGCCAAACTTGCTTGGAACTGCTAGATAAGTCTTACAGTTTTAAGAAGTTGTGCCAAAAATCTGAATCCATTTTAACTAAAACGTTTCAAGACAAACAAACTTTCGCAATAAAAAATAATTCAGAGGATTGTAACACTCAAAGCTCGTTAGACTCTAGCGATGATTTACGAAGAAATGAGATTTTTAACCAAATTACAGACTTACTTAAAAACGAGGAAAGTACAGCTGATTTTTCAGAAGGGGAAGCACAAATCCAAGAGGATTTTATATCATTTCTGGATGATCCTTTGCCGCCCCCTTTGCCATTTCAGTGTGAGAATTGTAGTCACTCTTTTAAGGAAGAAAAAGACTTAAAAATCCACCAGTCAGTACACAATTCTGACTTAACTTGTCTCGCATGTTCAAAAAAATTTAAGGGTCGCCAAAGCTTGAAGAGACATTTGAAAATACACCTTACTCAGAAACCACACGTTTGTAAAATTTGTAGCAAATCTTTCTCCGAGTCCTACGCTCTAGTTAAGCATTTGCGTCGCCACTCGGGGATTCCCCGGGAAAAAAGACACGTGTGTGGGGAATGTGGACAGGGGTTTTCAGAGCCTTACTACCTGAAAGTGCACGTGCGGAAGCACACAGGGGAAAGACCTCTGGCATGTCCTGACTGTGATAAAACTTTTGCTGACCCAAGGTCTCTCAAAACGCACGTCATGATTCACAGCGGCGAGAGACCTTTCAAGTGCAACTATTGCTCGAAGAGTTTCATTCAAAATGCGAATTTAACAAAGCATTTGAGGGTACACACGGGCGAGAAACCGTACGCTTGCGGCTTGTGTGATAAGAGGTTTACGCAGTCTTCCAGCCTAGAAAAGCACAAAAAAGTTTACAAGTGCAGGAGAAAGTGCAGAAACGGGGAAAATGTGTCTTTTTGTCAATAA
Protein Sequence: MDSSLSISNFSNICRTCLVENVELKDIFSSSVDKLLKECTSIQLQSGDGLPEFICETCINKVSEAYSFKLLCESSDQTLRNILQNSVLDDDKEEMGILENYDDCSNADDPVLETVTDKEYFTNSQDNLNDHSYFAEVKVNTLDELEDIECKLCGQTVPKNQEKSHMESCHIGDNYHICNKCKKEFTDVKLLKRHMRTHKLKKNHNCPTCGKSFYGANDLTIHIRVHTGEKPLTCTVCSKAFADPRGLNSHMKTHTGKKPYTCNTCGKSFAHSFVLTTHKRTHTAERPYVCSSCGKTFIYSHNLAIHMRSHTGERPYQCQQCYKSFSSSSTLSAHMMTHTGEKRFVCSVCGKKVARSGDLAIHMRIHTGERPYSCNLCFKQYRMSSHLSAHMKSHTGEKNHICNTCNKAFSNARILSSHMTIHTGEKPYTCAVCNKSFAHYSSLSTHRKIHMHDKNQKKENISRCFNYRLKLNCNCLVDCNVHGACTIFGAIFTDIKMATCDGVIDCSPPKKAKLAENSEKCNDGIHETLADLSSFQLEKVLHNNTNRKTVCLKGKFAAKNGDALVLLEKTAFAEENLTGDSDYFTKASSLEKVFHNDIYGNYNYFPKINLNTVKATIIHPATEEHFLKYSQQNCRIIDETPEIYEQVVLPQITSEQFDLNWVYNILEHKSESDRIVFEDSDPNTGFILLPDLKWNGEVDTLYLLAVVHKRGIKSLRDLTGSHLPLLKNIQKKGIEAIKSKYGLDGNQLRIYLHYQPSFYHLHVHFTYIKHEAPGILAERAHLLANVISNIELLPDYYQKVTLPFVVRENDKLYKKLKSVNVLINLISPLEVSKISLNEDSFQIIVDEHVHTVSCKNLKIVVNSLSSLIVTQTYISFRFATVNSSDDWGSFKTEVLKTAGSNVPTNLQNIFLKVAVPYVLQCKNCSQNLSENVKFERVLPLPSENSDSSDWFCHSHGGSNVAVLNPKETDVFYGSCYCHLSKPLVRNVIESEKVVVCKRCLSWLGLLKISETFKFWFNTVAFKDGSVVHSTSPLGDTFAALREVLNSILFNTAKIVLCCQSGKKQNDYILLWILEKQLNVQLGVKDCKVAKVLFKYENNKNEIVKKWMEDSNVLDFNSVCRTCLQSESNLTPLHHSKAAEMLIYCNFCKVCEDDGFPDKICQTCLELLDKSYSFKKLCQKSESILTKTFQDKQTFAIKNNSEDCNTQSSLDSSDDLRRNEIFNQITDLLKNEESTADFSEGEAQIQEDFISFLDDPLPPPLPFQCENCSHSFKEEKDLKIHQSVHNSDLTCLACSKKFKGRQSLKRHLKIHLTQKPHVCKICSKSFSESYALVKHLRRHSGIPREKRHVCGECGQGFSEPYYLKVHVRKHTGERPLACPDCDKTFADPRSLKTHVMIHSGERPFKCNYCSKSFIQNANLTKHLRVHTGEKPYACGLCDKRFTQSSSLEKHKKVYKCRRKCRNGENVSFCQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -