Tcas008840.1
Basic Information
- Insect
- Tribolium castaneum
- Gene Symbol
- F54F2.9
- Assembly
- GCA_000002335.3
- Location
- NC:13477517-13479393[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.4e-07 0.00019 21.0 0.0 2 35 273 309 272 323 0.86 2 2 1.3e-11 1e-08 34.6 0.2 2 44 354 400 353 402 0.93
Sequence Information
- Coding Sequence
- ATGATTATATTACGTGCAGTACTATTTATTTTTTGTTTAAAATCAGCGGCCGCGTGGGATTCGGAACAACTGGAAGTGTTTGATGTTGTCGACGAGGTTAAAGAAAATTTCTATACTCTCCTAAATGTCTCACAGACTGCTACAAACCAGGAAATTAAGTCCGCTTTTAGGGCACTGTCCCTCAAATTGCACCCTGATAAGAACCCCCACGTTGACACGTCAGTGCAATTCCGAAACTTGGTCGCAGTTTACGAAGTACTTAGAAGCAGTACCAAGCGACAATACTACGATGAAGTCCTTGTTAATGGACTTCCAAACTGGAGATCTGCTGTTTACTACTACCGATATGTGCGCAAAATGGGCATGGTGGAAGTTTGCATTATTTTATTTGTTATTGTTACCATTGGGCAGTATTTAGTTAACTGGGCTTCTTACTTTGAGAGAAAGTATACAATTGAACAAAATAAAAAAGTTAAACGCGGAAAAAAGTCCGACAAAACTCAAGAACCAGCTGTGATTTTAGAAAAACCCTCAATAACTGACACGTTGCCTGTGCAGATACCTCGTCTACTTTGGTTCATTATTATTTCCTTGCCTAAAGCTCTGGGTTTGATCAAAACTGCAGTAGTTCAACAAATTGAAGAAGTCAGGAAACCGCCGCCTCCAGAAGAACCAGAGGAGGCGCCAGTTCGAATTAAAACCGTGCGCAAGCGCAACAAAGGCTTCGTCTTGCCTGACAAACCCAATTTTGAAACAACATTCCACAATTCTACCACCGAATCAAATGCTTCATCTCCGCCTCCTGTTAGTTCAGGCGGATTGTGGACTGATGATGATTTGGCAGAATTGGTTAAACTAGTGAAAAAATATCCAGGTGGGACTTCGGGAAGGTGGGAGACTATAGCAGAAATAATGGGGAGGTCGGTCCCTGAAGTCACCTATATGGCAAACAAGATGAAAGAAAATTGTTATAAATTATCGAATGAGCAGGAGGAGGAACCAATTCAAGTGAAAGTGAAGCAAAAAACGAAGAAAGAAGTCGATGGGGGCGATGATGTGAAGAAGTGGAGCCAAAGCCAGCAAAAGGCGCTGGAGGAAGCGCTGGCTAAGTACCCAAAGGGCTGTGCAGAGAGGTGGGACAAAATTGCCGATTGTGTCCCTAATAAGACTAAGGAGGAATGCATGATGAGGTTCAGGTATCTCGCAGAAACGGTTAAAAAACAGAAAGAATCAACGGAGCAGCAACCTCCTGATTAA
- Protein Sequence
- MIILRAVLFIFCLKSAAAWDSEQLEVFDVVDEVKENFYTLLNVSQTATNQEIKSAFRALSLKLHPDKNPHVDTSVQFRNLVAVYEVLRSSTKRQYYDEVLVNGLPNWRSAVYYYRYVRKMGMVEVCIILFVIVTIGQYLVNWASYFERKYTIEQNKKVKRGKKSDKTQEPAVILEKPSITDTLPVQIPRLLWFIIISLPKALGLIKTAVVQQIEEVRKPPPPEEPEEAPVRIKTVRKRNKGFVLPDKPNFETTFHNSTTESNASSPPPVSSGGLWTDDDLAELVKLVKKYPGGTSGRWETIAEIMGRSVPEVTYMANKMKENCYKLSNEQEEEPIQVKVKQKTKKEVDGGDDVKKWSQSQQKALEEALAKYPKGCAERWDKIADCVPNKTKEECMMRFRYLAETVKKQKESTEQQPPD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01480804; iTF_01409923; iTF_00167591; iTF_00870503; iTF_01567818;
- 90% Identity
- iTF_01480804;
- 80% Identity
- -