Tcas001302.1
Basic Information
- Insect
- Tribolium castaneum
- Gene Symbol
- JARID2
- Assembly
- GCA_000002335.3
- Location
- NC:10273236-10287659[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.8e-22 5.9e-19 67.8 0.0 6 89 1234 1315 1230 1315 0.93
Sequence Information
- Coding Sequence
- ATGGTAATAAACCGGGGCGAAATGAAACGCAAACGCCGCGACGAGTGTTCATCCCCCTTACTCGACGAAAGCCCCAAAAGGACCAAAGTGCACGCGCAGCGCAAATTCGCCCAAGGCTCCAACGTAAACAGCCCCGTTATAACCCCAGTCAAAGAAATCGAAAAACAAGAAGTGGACGTCCTTCCCGAACCCGTGGAGCTGCTCCCCATCAAGAGACCAAACACCGAAGACTTCTTGACGTTTCTGTGCTTCAGGGGAACCCCAATCCTCCCCCCGAGCTTGAATTTCTTCAACACGGCTTCGATAGTGGACACCAATGGCCAAGTGCACGAAATCAAGAGTGAATCCCCGAAAAACGGCCCCATTGACACTTCCACGATCGCTAAAGCGGGCTCGGGGTCCTCCGACCGGCCGTTCATTGCGTTTGGGGTCCGAAAACGCGCGGACCCCATTGTTATCAGCCGCCAAATGGACAAAAAACGGCGGCATGCTCTCGCAGTCCAAGCGTTGAGAAGGAAGTACCAGGAGCAAAGAATGGCGAAAATTCGGGCTGTTACCATAAGCAAACTGTCGGAAAAAGTCGCCAGTAAAACGCTAGTTCGCTCGAATTCCGTGTCGAAAACCGAAGCGGTTAAGAAAAACGCCACGGTTCAGAAAAGTAAAGTTAGCGTTGAACCGAAACAAGTGAAAGTGGCGACGCGTTCGGTTAAAACCGCCCTCAGGCCGCAGATCAAGCAAAAAATGTGTTTGCGCAGTTTCAGGGGACGGTTTGTGCAGAAAGAGTTGCAGTTTAGAAATGTGAAGAAAAGGCCGTTGCCACCGGTTAAAAAACCGGTTAAGAAGAGTGAAGAAACGAGTGAATATTCGTCAGATGATGATAAACCGTTGAAGACGTCGAAAAGTGTGGTCCCTAAAGTGGCGAAGAAGTCGGCGCCGGGGCCCAAAAAACCAATAGAAATCAATTTCAGAATTACCCGTTCGAATAAATTTCTGAACAACAAAATCGTTTCAAGGCGACAACAGATCAAACAACGGATGTTGTTATCCACACCGAAAACAACAGTCAAGCCTAGAACTTTAAGATCGCAAACTGCGCAAAAATCAAAGATAGAAACGGCCAAAAAAGTTTTAATAAAAAGCAAAGAAGTTGGTAAAAAAGAAACAGTTGTAAAGAAATTAATAGAAACAAAAACGAAAGAATTAAAAGTTGAAGCTCTTAAAAAATCAGATCGTTTAAAGAAAGATGTTTCTCCAAAAATGGAAAAACCACCACCAAACGTCAAAAAAGACGTAGACAGTGGGAAGAAAACGAAAATTGTTCCGAAACCAACGCCAAAAAAAGACGAAACATCGAGTGAGAAGAAAGATTTGGTTAAGAAGAAAGCTGTAATGAAGAAAACGGCTCAAAAACCGGCCGAAAGTCCACCACGCAAAGACCCACCCAGTAAAAAAGTGGATGAAGATAAGAAAATTGATAAACCAACCGAACAAATGGAATCGAGAGCTTCTCAAAGACCGACTCGCAAAACCAAAGAAGCTGCCGCCATCTATATGGAAATTCTTAGTCACAAATTAGTAAACGAGAGTCGACTCGATGACGATAATGTCTCAATTGACAGTTTCCCAGAATTGCCAAATGTGAAAAAAACCGAACAGAGGGAAAACGAATTAAAAGCGAAAGCAAAAACGACGAAAACATCGGAGAGTGAAAGTGATACCAAAAAATCACCGAAAAAGGAAATGGAGGTGGAAAGTAAAGTTTTGAGGTCTGGTAGTGATAAGAAGAAAAGTGAAGAAAAGGTGAAGAAAAGTGAAGATAAGGTTAAGAAAAGTGAAGAACCGGTTTGTGATCGTAAAACCCGATCGGCGGTCGCTTCACCCTTGGAGCTTAAGGTGCACATAAATGCGATCGAGGTCACTTCCGAGAAGAAGAAAGAGAAGAAAGGCAAAGAAAAATTCGAAGATGATGAAAGTTCGAACTCGGACGTCTCTGACAATAATTTGAAAACGAAAGATAAAAGTGGAAAAAGTGATGAAGGGACTAAACGACAAACCAGGAACTCGTCCCAAAACATCAGGCATTTGGAGGATACTGATGATTCCGACGAGTCCTTTCGTGCGGACATCAGGATTCCGAGGAAAAAACAAATAACCAGAAGTAAAGTCTCAAAAAACTGTGACAGTGAGAACGACAAAAACTCTCTCAAAAAATCGCTAAGAACGAATTCGAGGAGTTACAGAGAGTGCAGTTCGAGTGAATCTGACCAGTCCACCACCTCCGATATAAAACCGACCATAGTTAATAAAACCAAAAAATTTACAAAAACGAGAAGTGTGCAAAAAGGGGAACAAAGCTTCAGCGATTCGGACGAAGAACCACTTTCGAAACTAACACAAAATAAACTTAGTGACGGTAAAGATGTTGCAATTAAGGAAGAACCGAAAGAAAGTGGGGAAAAAGAAACCAAACCGAAGCGCGAATGCGCCAAACGCCCCCAAAACTATCTCCCGATGTTCTCATCATCGGACGAAGACGAAAACTACTTTCAAGGTTTCAAAACAAAACCTGAAAAACCCAAAATTACGACTAAACTGCCATCGCCTGGCTGCTCTCACGCCAACACCACTGTGGACCTTAAAGACATAAGCCGACGTTTCGGCAAAGAAAAGGTTAACATGTCGACCGAACAGATCGAAAAGTGGCTCAAAGACTCCGCCATGGCTGGAAGTAGCGTCAAAAATGAAAATGACGCTATGTTGAAGTTTGGTGAAAAAATACCAACTGAGACCTCGCACAGTGTTGCCAATTCAATTGACACGGAGAAACTAAAATCGTTGCTTATTACAAACATCGAAAAGAAGGAAGTGTCACCGAAAGGTCTTCCGAACGAAATTAAGGCAATTTTGGCCAAACCAATGATCACCGATCGGAAATTAATTTTCCGCAATAAAGATCGAGTCGGGACAGTTGTAGGGGTTTCCCCCAATGTCAACGCCTTCTCCGTTAGTAACGAGAGCAGTGTTTATGCGTTCGGTGAAGAGGAGGACGTAATGAAGACTCCTTTCAGGAGGCCAACTAGACGTCCATCAAGCACTGCCACTTCAAGATCGGAAGATGAATCCTCAAAATTTGAGGAGTTTGCAAAATTCCGCAAACCAACCCTTGTCAAGCAAGAATCTGAAGATAACTTACCCCTTGGTGGCACCGAAGATAGTCCCTTCTTTACCCCACAGAGGGTAACTAAGCCAAAAATTGACAAAAAACCCATGGTGCCACCAAAACCTCCCCTTAAACAAACCCCCAAATCGTGCAATTCTGACGCTTCGGAAGAGTTTAAATACAAAGTACCAAGTTCGCCGAGCGCTAGCTCCTCATCCAGTGCGAAATTGTACAAACGACAATGCACTAAACCTAAAATCCGGGCGAGTGAAGTGGTTCCGGTCAAGTTACCAGATTTTCCAGTCAACGGGGCACAGTTAGTGGAAGGACCGACTTTTCATCCTAGTGAGAAGGAGTTTCAAGATCCGTTGGAATATATCGAGAAGATTCGGCCCAAAGCTGAACAGTTCGGGATTTGTCGGATTGTACCACCGAGTACTTTTAAACCGGAGTGTAAAGTGACCGATGATATGAGGTTTACTGCGTATAATCAGTACGTTCATAAAATGTTGCATCGGTGGGGGCCCAACTTTAAGGAGTTGATGGCGATTAAGAAGTATCTGTCCACGCAGAATATTAATCTGACTCATCCACCATGGATTGGCGGTATGGAGATTGACTTGCCACGTCTCTACCAAACCGTCCAGTCCCTCGGCGGTCTCAAAGAAGTCATCGAGAAGAAGAAATGGCCGAAAGTTTCCGACCTCATGAAAATACCAAAGTCGGCACAAGACAGAGTCACGAAACTAGACGACATCTATTGCAAATATCTATTACCATACGATACTTTATCACCTGCCGAACGCGAAAAATTATTTGACGAAGTCGAAACCGAATGGGCAAAACGCGAGTCAAAATCCCTCCTCAAAGCCCAACAAAACATCGACGATAACAACACTGAGATCGAGTCGGAATCCGACGATGAAGCCGAAGAGTGTATTGTCAAAGGGCGCAGTATGGCACTGAATGCGTTTTACCGAATTGCAAGAAATACAATGAGTATGTGGTTCAGGACTTGTGAACCGCCGGCCGAAGAGGTCGAGCAAGAGTTCTGGAAACATGTGACTGTGAAACAAAACCATATTTGTGTCCATTCGGGCTCGATTGACTCCGGGAATTGGGGCTATGGATTTGCAGTCTCGAAAAATAGCCCCTTTGCCAGACACGCGTGGAATCTCAAAGTGCTGACGAATAATAGTGGGTCGGTACTAAGATCCATGGGTCCAGTTATGGGCGTAACGGTACCAACCCTGCACGTGGGAATGGTGTTCAGTTCGTGCTGTTGGTACCGCGACCCCCACAGCCTCCCATGGATCGAGTACCTCCACACTGGGGGTAACAAAATCTGGTACGGCATTCCCGACTCAACCAGTGGTGCTTTTCACACCGCGTTGAAAACCTTAGTACCTAATTACTGTCGAAATAAGAGTCTCTGGTTACCATCAGACACAGTGATGGTACCACCAAACCTCCTAGTCGAAAATGGAGTCTCACTGTCTCGAATTGTGCAAGAACCGGGACAGTTTATTATAGTTTTTCCTAAAGCGTTCACCTCGAGTTTAAGTACCGGTTACGTGGTGTCCGAAAGTGTGTATTTCGCGCCTTCCTATTGGCTGAAGACCGGCAGACTTGTTTTTAACGAGCTGAGAAACAGTTGCGAACCGTCGATGTTTTCGTTCGATAGACTTTTGTTAAGTATAGTGAACGACGCGAGGTCGAATGTGGAGGTTTTGAAGCAGATCATACCAGCGGTTCAGGAGCTATGTGATAAGGAAAAGTCGGCGAGAGAAAGGGTTAGAAAGCTGGGCGTTTCAGCGACGGAAAAATTGCCTCTGCCGGACGCCCCAAAAAAGAAAAAGAAGCTTCATAATGAAGACGGGGAGTACGAGTGTGAAATTTGCAGAATGAATCTTTTTGTTTCAATGGTGATCGAATCGCAGGAAGACCTGGTTTATTGTCTAGACCATGCGGCTGAACAAATCGAACAAAAGAAAATACAATGCAAGAACTGTACTTTGAGTTTTACGTACGATGATACGGAGTTGGATGGACTGGTTGATAAAATCAAGTCGGCGATTTGTAACAAATTGCAAAAGAAAGTACCTAACCGATTTACAGGGATGCCAACGTTGCTTAAATGA
- Protein Sequence
- MVINRGEMKRKRRDECSSPLLDESPKRTKVHAQRKFAQGSNVNSPVITPVKEIEKQEVDVLPEPVELLPIKRPNTEDFLTFLCFRGTPILPPSLNFFNTASIVDTNGQVHEIKSESPKNGPIDTSTIAKAGSGSSDRPFIAFGVRKRADPIVISRQMDKKRRHALAVQALRRKYQEQRMAKIRAVTISKLSEKVASKTLVRSNSVSKTEAVKKNATVQKSKVSVEPKQVKVATRSVKTALRPQIKQKMCLRSFRGRFVQKELQFRNVKKRPLPPVKKPVKKSEETSEYSSDDDKPLKTSKSVVPKVAKKSAPGPKKPIEINFRITRSNKFLNNKIVSRRQQIKQRMLLSTPKTTVKPRTLRSQTAQKSKIETAKKVLIKSKEVGKKETVVKKLIETKTKELKVEALKKSDRLKKDVSPKMEKPPPNVKKDVDSGKKTKIVPKPTPKKDETSSEKKDLVKKKAVMKKTAQKPAESPPRKDPPSKKVDEDKKIDKPTEQMESRASQRPTRKTKEAAAIYMEILSHKLVNESRLDDDNVSIDSFPELPNVKKTEQRENELKAKAKTTKTSESESDTKKSPKKEMEVESKVLRSGSDKKKSEEKVKKSEDKVKKSEEPVCDRKTRSAVASPLELKVHINAIEVTSEKKKEKKGKEKFEDDESSNSDVSDNNLKTKDKSGKSDEGTKRQTRNSSQNIRHLEDTDDSDESFRADIRIPRKKQITRSKVSKNCDSENDKNSLKKSLRTNSRSYRECSSSESDQSTTSDIKPTIVNKTKKFTKTRSVQKGEQSFSDSDEEPLSKLTQNKLSDGKDVAIKEEPKESGEKETKPKRECAKRPQNYLPMFSSSDEDENYFQGFKTKPEKPKITTKLPSPGCSHANTTVDLKDISRRFGKEKVNMSTEQIEKWLKDSAMAGSSVKNENDAMLKFGEKIPTETSHSVANSIDTEKLKSLLITNIEKKEVSPKGLPNEIKAILAKPMITDRKLIFRNKDRVGTVVGVSPNVNAFSVSNESSVYAFGEEEDVMKTPFRRPTRRPSSTATSRSEDESSKFEEFAKFRKPTLVKQESEDNLPLGGTEDSPFFTPQRVTKPKIDKKPMVPPKPPLKQTPKSCNSDASEEFKYKVPSSPSASSSSSAKLYKRQCTKPKIRASEVVPVKLPDFPVNGAQLVEGPTFHPSEKEFQDPLEYIEKIRPKAEQFGICRIVPPSTFKPECKVTDDMRFTAYNQYVHKMLHRWGPNFKELMAIKKYLSTQNINLTHPPWIGGMEIDLPRLYQTVQSLGGLKEVIEKKKWPKVSDLMKIPKSAQDRVTKLDDIYCKYLLPYDTLSPAEREKLFDEVETEWAKRESKSLLKAQQNIDDNNTEIESESDDEAEECIVKGRSMALNAFYRIARNTMSMWFRTCEPPAEEVEQEFWKHVTVKQNHICVHSGSIDSGNWGYGFAVSKNSPFARHAWNLKVLTNNSGSVLRSMGPVMGVTVPTLHVGMVFSSCCWYRDPHSLPWIEYLHTGGNKIWYGIPDSTSGAFHTALKTLVPNYCRNKSLWLPSDTVMVPPNLLVENGVSLSRIVQEPGQFIIVFPKAFTSSLSTGYVVSESVYFAPSYWLKTGRLVFNELRNSCEPSMFSFDRLLLSIVNDARSNVEVLKQIIPAVQELCDKEKSARERVRKLGVSATEKLPLPDAPKKKKKLHNEDGEYECEICRMNLFVSMVIESQEDLVYCLDHAAEQIEQKKIQCKNCTLSFTYDDTELDGLVDKIKSAICNKLQKKVPNRFTGMPTLLK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01480640;
- 90% Identity
- iTF_01480640;
- 80% Identity
- -