Tcas002378.1
Basic Information
- Insect
- Tribolium castaneum
- Gene Symbol
- Kdm5
- Assembly
- GCA_000002335.3
- Location
- NC:5899887-5909589[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.3e-25 2.8e-22 78.4 0.0 2 89 110 193 109 193 0.95 2 3 4.7 9.9e+03 -3.5 0.0 48 76 796 822 794 832 0.65 3 3 0.079 1.7e+02 2.2 0.0 32 79 1230 1276 1227 1286 0.73
Sequence Information
- Coding Sequence
- ATGACTACAAAAGTGGATAAACCCACCAGTCCTACTAAAAACCACGCGAAAAACACCAGCCCGAAGCAAGACTCGGGCTGTGGCTACAAAGAAGAGTGTTTCGAGTTCGAGCCTCCACCGGAGGCTCCCGTTTTCCACCCAACCGAGGAGGAATTCAACGATCCGCTCGAGTACATCAACAAGATCAGGAAGTATGCTGAGGGATCGGGCATTTGCAAGATCAAACCGCCTCCAAATTGGCAACCGCCCTTTGCCGTTGACGTTGACAAACTTAGATTTACGCCACGAATTCAGAGACTTAACGAATTAGAGGCTAAAACTCGCGTCAAATTAAACTTCCTCGACCAAATCGCCAAATTCTGGGAACTGCAAGGTTCCACACTGAAAATCCCAATGGTAGAAAAACGCTGTATTGACCTGTACACGTTGCACAGCATTGTTCAAAGTCAAGGTGGTTTTGACCAAGTAACCAAAGACAGAAAGTGGTCGAAAATTTCGGTCTCTATGGGGTACCCATCTGGTAAGAGCATAGGGACCATTCTAAAAACGCACTATGAGAGGTTGCTTTACCCGTTTGATCTTTTCAAACAAGGCAAAACTTTGAATTTTAAAATGACATCACCCTTAAATGAGGAAAGCGAGAAGGCTGATAAAGACTATAAACCGCACGGGATTGTGGGGCGAATGGCGATCAAACCACCACCTGAGAAACACGCTCGCCGATCTAAACGATTTGATGCCGACCCGAGAGTCGAAGACGATGTCAAAGAAGATTGCAAAGACGACAATAAAGAACTGAAACGTTTGCAATTCTACGGCGCCGGCCCAAAAATAGCCATTAGCAAGGACAAAGACGATGACAAAAGAAACAACAAAACTGTCAACTACGACTTTGATCCTTTGGCAAAGTACGTCTGCCACAATTGCAACCGCGGCGATTCTGAAGAGTACATGCTGCTGTGTGACGGCTGCGACGACAGCTACCACACCTTTTGCCTGATGCCACCCTTGAACGAGATCCCGAAAGGGGACTGGCGGTGCCCGAAATGTGTGGCCGAGGAGGTGTCCAAGCCAATGGAAGCCTTCGGCTTCGAGCAAGCTCAAAGAGAGTACACTTTGCAGCAATTCGGCGATATGGCCGACCAGTTTAAATCCGAGTATTTCAACATGCCGGTTCACATGGTGCCCACAAACGTCGTGGAGAAGGAATTCTGGCGCATTGTCTCGTCAATTGACGAAGACGTGACGGTCGAGTACGGCGCCGATCTGCACACTATGGACCACGGCTCGGGCTTTCCCACCAAAACGTCCCTGAACCTCCTGCCTGGGGATAAGGAGTACGCCGATTCCGGCTGGAATTTGAACAACCTCCCGGTTTTGGAGAACTCGGTTTTGGGGTACATTAACGCGGATATTTCCGGGATGAAGGTCCCGTGGATGTACGTCGGGATGTGTTTCGCGACGTTCTGTTGGCACAACGAGGACCATTGGAGCTACTCCATCAATTACCTCCATTGGGGCGAAGCCAAAACTTGGTACGGAGTTCCTGGGAAAATGGCCGAGGCCTTCGAAGAGACGATGAAATCGGCCGCTCCCGAGCTGTTCCAGTCACAGCCCGACTTGCTGCACCAGTTGGTCACAATCATGAACCCTAATATTTTGATGAAGGCTGGAGTTCCTGTGTTTCGGACGGATCAACACGCGGGGGAATTTGTCGTTACTTTCCCGCGGGCGTATCATGCCGGGTTTAATCAGGGGTATAATTTTGCCGAGGCTGTCAATTTCGCACCAGCTGATTGGCTGAGGATGGGCCGGGAGTGCATCTTGCACTATTCGAACTTGCGCCGTTTTTGCGTTTTCTCCCACGATGAGTTAGTGTGTAAAATGGCTCTGGACCCGGATAAGTTAGGTCTGACGATTGCCGCAGCTACATATCAAGACATGCTACAAATGGTCGAAACCGAGAAAACTTTGCGAAAGACGCTGCTTGATGCGGGAGTGTCTAATGCCGAGCGCGAGGCTTTTGAGTTGCTTCCTGATGACGAAAGGCAATGCGATCATTGCAAAACGACATGCTTCCTATCTGCGGTAACATGCAAGTGTTCACCGGACATTCTCGTTTGTCTTCGTCATTACAAAAATTTGTGTAATTGCAACCCGGAGAATTACACGTTACGGTATCGCTACACTTTAGATGAATTGCCGGTGATGCTCAAGTCCCTAAAACTGAAGGCGGAGTCGTTCGACCATTGGGTCAATCGCGTGAAGGATGCTTTAGATCCGAAAACTCCCAAAACACTGACGTTACAAGAGTTGAAAGCTCTACTCAACGAAGCAGACGGGAAGAAATTCCCGAAGTGTGATTTGCTTCAAACTCTAACCGACGCGGTCGAAGATGCCGAGAAATGTGCAAGAGTTATCCAACAGCTAGATCTAAATAAAATGCGAACAAGAACTCGAAACTCATCTGACACGAAATACAAACTGACGCTTAAAGAACTGATTCTTTTCCACGAAGAATTGGATAGTCTAGTGTGTGTTTTAGAAGAAGCTAAAAGTATTAAAGACTTACTAGAAGAAACGAAGAAGTTCGAAACAACTAGCAAGGCTTTACTCGAAATGAAACTGAGTGAATGTTCACTCTCCGACTTAGAGCAATGTATTAGTCAAGGAAATAATCTGTGTATAGAACTTCCGAATTTACGTAGTGTTAAAATGAGATTACGTCAGTGTGTTTGGCTGAACGACGTACTGTCCTACAAGAAGAAAACCGAAGTTCTTGGACTTGAGTCAATTAAAAATATTATTAAAACCGGTACTCAGCTACCACCAAATCCTGAAATTGAAGTCGAATTGAGCGAACTACAAGCCCTCCTGTCCAAAAGCGAAGAATGGGAGGAAAAAGCACAAGCAATTCTCAAAGATACCGGAAGCGAAGTACTTATCGAAGTCGATAAATTGCTAAAAGAAGCTGGACAAATCAATTCGTATCTTCCATCTGAAGAGTTCCTTTTTGAAGCCATGGACAAGTCTCGAGACTGGTTGCGTCAGCTAGAAGAAATGAATTCGGCTGAGTGTTACCCCTATTTCAACGACATGGAGGAGTTGATTAAAAGGGGACACCAGTTGGCGCTCCATTTGGTTGAAGTCAGCAAATTGGAGTCGTTTTTGGAGACCGCGAACGCATGGAAGGAGAAAACAAGTCGGGCGTTCCTTCGCAAAAACTCGTCCTGTACCCTAATGGAAGCCCTGTCGCCTCGAATACAATTCAACAGCAATTCGAAATGCCGCAAGAAGAATCAAGAGGACGAGCATGGCATTTTCAACCTGACCAGTGACATGGACCCTGCTACCGTTGTAGCACTTTTCAAGGATGCCGAACAAAATGAAATGGAGTTGATACGAGCAGTGCGCGCTGCAAACTTGGAGAAAAGCATGGACCCGAACGATTGTGCCTCGTTTTGCGTCTGCGGGCGCAGCCTTTTCGGCTTGATGATGCAGTGTGAGCTGTGCAAAGATTGGTTCCATTCAAACTGCGTCCCTCTTCCCAAAGTCGCGTCTTCAAAGTACAAAGGCAACTTTACGAGTGTTGCACTACATTTGGGATTCAAAGACTGTAAATTCCTCTGTCCTAACTGCTACCGGACCAAGCGTCCACGTCTAGACGCGATCCTCCTGCTCTTGATGTCCTTGCAGAAGCTCTTTGTCAGGGTGCCGGAAGGCGAGGCTTTGCAGAGTTTGACTGAACGCGCTATGAACTGGCAAGACCGTGCCCGCCAACTCATCCAACAACCGGAACTGGAAGCAGCTAAAAACAAACTCGCTTCGTTCAGTCAGAAGTATTCGGAAGCAGCAGCGAGGCAAAGAACTGAGAAGATCATTTCGAGCGAGCTAAAGCGCGCATATAAGAACCCCGATTTGTTACAAAGAGTGCAAGAGATAGCACCCTTCAGTGGAGTCACCCCGGATGATAAGTCGGATGATACGAACATCACCGATTCGTCAGACGACTCCAAGGGTTACGGTTCGGCGGATGACCGAATGGGAGAACACGCTTACTCCCTCCATTTCCCGAAATTTGACTCGGGAGAATATAAGTTGCAAATCGCTTCAGATATCAGGAAGCAGATTGAGGAGTTGTTGATGGAAGGGGATTTGCTTGAGGTTTATCTCGATGAAACTTTCCAACTCTGGAAGTTGCTCCAAGCGTCGCGGGATCCGGAGAAAGAGGCTATTTTGATCGATTTTGATATGAATTCGAAGACTGCGCCGTCGAAGCGCGGCCGCAAGCGTCGTTCGGACGAGGTCGAAATGATGAAGAAGTCCAAACTGGTGAAAGACGAAAACAAGAAGTCCAAACCGAAAACCAAAGAAACGCAAGGGAAGAAAGAGGGCACAAGACGCAAGGGCCGCCGGCGCCAGTCCACCGGCTCGGAGGACGAGGACGAGGACAGTTGCGCTGCACCGGGCTGTCTGAAGCCGTCGGGAGAGAACGTCGACTGGGTTCAGTGCGACGGTGGGTGCGATAAGTGGTTTCACATGGCCTGTGTCGGGTTGTCAGCGCAGGATATTTGCGAAGATGAGGATTACATTTGTATGACCTGCTCACAAAATGCTTACGGAACACTCAATGCCGTCGATAGTTTCTCGTCTATCAGTTCTGATTGTTCCACTTTATCCCAGCCTTCCACTTCGAAAGACTCTGTTCAGTGCAAATTTTAG
- Protein Sequence
- MTTKVDKPTSPTKNHAKNTSPKQDSGCGYKEECFEFEPPPEAPVFHPTEEEFNDPLEYINKIRKYAEGSGICKIKPPPNWQPPFAVDVDKLRFTPRIQRLNELEAKTRVKLNFLDQIAKFWELQGSTLKIPMVEKRCIDLYTLHSIVQSQGGFDQVTKDRKWSKISVSMGYPSGKSIGTILKTHYERLLYPFDLFKQGKTLNFKMTSPLNEESEKADKDYKPHGIVGRMAIKPPPEKHARRSKRFDADPRVEDDVKEDCKDDNKELKRLQFYGAGPKIAISKDKDDDKRNNKTVNYDFDPLAKYVCHNCNRGDSEEYMLLCDGCDDSYHTFCLMPPLNEIPKGDWRCPKCVAEEVSKPMEAFGFEQAQREYTLQQFGDMADQFKSEYFNMPVHMVPTNVVEKEFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKTSLNLLPGDKEYADSGWNLNNLPVLENSVLGYINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEAKTWYGVPGKMAEAFEETMKSAAPELFQSQPDLLHQLVTIMNPNILMKAGVPVFRTDQHAGEFVVTFPRAYHAGFNQGYNFAEAVNFAPADWLRMGRECILHYSNLRRFCVFSHDELVCKMALDPDKLGLTIAAATYQDMLQMVETEKTLRKTLLDAGVSNAEREAFELLPDDERQCDHCKTTCFLSAVTCKCSPDILVCLRHYKNLCNCNPENYTLRYRYTLDELPVMLKSLKLKAESFDHWVNRVKDALDPKTPKTLTLQELKALLNEADGKKFPKCDLLQTLTDAVEDAEKCARVIQQLDLNKMRTRTRNSSDTKYKLTLKELILFHEELDSLVCVLEEAKSIKDLLEETKKFETTSKALLEMKLSECSLSDLEQCISQGNNLCIELPNLRSVKMRLRQCVWLNDVLSYKKKTEVLGLESIKNIIKTGTQLPPNPEIEVELSELQALLSKSEEWEEKAQAILKDTGSEVLIEVDKLLKEAGQINSYLPSEEFLFEAMDKSRDWLRQLEEMNSAECYPYFNDMEELIKRGHQLALHLVEVSKLESFLETANAWKEKTSRAFLRKNSSCTLMEALSPRIQFNSNSKCRKKNQEDEHGIFNLTSDMDPATVVALFKDAEQNEMELIRAVRAANLEKSMDPNDCASFCVCGRSLFGLMMQCELCKDWFHSNCVPLPKVASSKYKGNFTSVALHLGFKDCKFLCPNCYRTKRPRLDAILLLLMSLQKLFVRVPEGEALQSLTERAMNWQDRARQLIQQPELEAAKNKLASFSQKYSEAAARQRTEKIISSELKRAYKNPDLLQRVQEIAPFSGVTPDDKSDDTNITDSSDDSKGYGSADDRMGEHAYSLHFPKFDSGEYKLQIASDIRKQIEELLMEGDLLEVYLDETFQLWKLLQASRDPEKEAILIDFDMNSKTAPSKRGRKRRSDEVEMMKKSKLVKDENKKSKPKTKETQGKKEGTRRKGRRRQSTGSEDEDEDSCAAPGCLKPSGENVDWVQCDGGCDKWFHMACVGLSAQDICEDEDYICMTCSQNAYGTLNAVDSFSSISSDCSTLSQPSTSKDSVQCKF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01480636;
- 90% Identity
- iTF_01409732;
- 80% Identity
- -