Tcas003118.1
Basic Information
- Insect
- Tribolium castaneum
- Gene Symbol
- Xbp1
- Assembly
- GCA_000002335.3
- Location
- NC:15263351-15265531[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-13 7e-11 41.5 14.3 2 62 41 101 41 113 0.89 2 2 6.6 4.2e+03 -2.6 0.0 42 58 136 152 128 156 0.53
Sequence Information
- Coding Sequence
- ATGACGAGTGCAGTTCCGGCCATTTTAAAGTATTTGAGCGACAGCAGCAACTACAATATTGACCAAAATATGGAGGCCCCTGTTAGGGCCAAAAAGAGGCGGTTGGACCATCTGACGTGGGAGGAAAAACTACAGCGAAAGAAGCTCAAAAACCGCGTGGCTGCCCAGACGTCCCGCGACCGCAAAAAGGCCAAGATGGACCAGATGGAGAAGGCCCTCCAGGAGTTGTTTTCGAAGAACGAGGTTCTGGTGCAGGAGTGTGAACGCTTGAAGGGCTTGAACGAGCGGTTGTCGGCAGAGAACGCGTCGCTACGAAGCCGATTTTCGACGTGCAGTTGCCCCCAGAGCCGGTCTGTCGAATGTGAGAGTGCAAGTGGACCAGCAGTGTCCCTTCTTCGGCCGCAAGGAGCGCTCACACATTCAGCAGCGGCTCTGAGCCAGCAAACGGCACTGTTGAAGATTGTGTTGGCCTGCTCTCTACCGGACCTCCTTGACGAGCTCAACAGCGACGTGGACATCTCCTCCCTCGAGCAGCTCACGCAGAGCCTCCTTCAGGATATCGCCAGAGACCTGGAGGCTGCTGCTGAAAAGGCAGATATTCAAGAACAAGTTGCTTGTCAAGAAGACAGTGCAGGACAAGTGGTGGGGCCGGCACCAGAACAACTGGAACCCGATGGAAGTGAAGTGTTGAGTGAAAAGCAAGATCCGCTCATTAAAGATATCTCACAGTATCTTTTGCTACATCACAATTACAGCGCAAGACCACCACCTGAAGATGAAGTGAAAGCACGACGCACGAGCACGACGAGGGCGCAACAAAGAAATAAATTAGCTTCGGATTATGTGTTGGGTACTTATGACGAAAGCACGAACTGTATCACGATTATTGTGGATGAGGATATGGAGACAAGTACGATTGAAGAAGGGGTTTCCCCCGGTGATGATGAGAGTTTGTTAAGAGTCGAAACGTCGCTCGAGTGTACTTCCCCGAGGTCGAGTTCGAGCTCGGATTGTGGGTACGAGTCGCTTGGGTCGCCTGAGAGTCAGAACGAGGATTTGTGGGATGATAGTGTCTCGGAATTGTTTCCATCGCTTTTGTAA
- Protein Sequence
- MTSAVPAILKYLSDSSNYNIDQNMEAPVRAKKRRLDHLTWEEKLQRKKLKNRVAAQTSRDRKKAKMDQMEKALQELFSKNEVLVQECERLKGLNERLSAENASLRSRFSTCSCPQSRSVECESASGPAVSLLRPQGALTHSAAALSQQTALLKIVLACSLPDLLDELNSDVDISSLEQLTQSLLQDIARDLEAAAEKADIQEQVACQEDSAGQVVGPAPEQLEPDGSEVLSEKQDPLIKDISQYLLLHHNYSARPPPEDEVKARRTSTTRAQQRNKLASDYVLGTYDESTNCITIIVDEDMETSTIEEGVSPGDDESLLRVETSLECTSPRSSSSSDCGYESLGSPESQNEDLWDDSVSELFPSLL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -