Tcas012161.1
Basic Information
- Insect
- Tribolium castaneum
- Gene Symbol
- Tef
- Assembly
- GCA_000002335.3
- Location
- NC:3759264-3760874[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.6e-14 4.2e-11 42.2 11.1 1 63 121 183 121 185 0.97
Sequence Information
- Coding Sequence
- ATGGATCAAAATGTTCACTACAATTTTGGCGGAGGCGCCGGGAACAGTCTCCTGCCAGTGTCGGCTTTCTCGGCCTACAGCTTGCTGAGGAGGTGCAATTATTTTCTGACACCACAAGCACCAGAAATTCACGCCAAAGCAGCACCTGTTCAAAGAATCCCTCCTGAAGATATCTCGTGCAAAGATAACGAAAAATGTTTCTTAAACCTACCATCACCACCCCTTTTTGGCTACCCTCACCATCTTCCACCAAACGAGCAACTAAATACTCGTCTTAATGCAACATCTCCGTGCTCGTCTTTATATTCCGCCAACTTTCGGCGACAAAGAGGTGAGAAGAAACCAATACCGGAGGAGCAAAAAGACGAGAAATATTTCGAACGAAGACGCAGGAATAATCAAGCGGCGAAAAAATCAAGAGATGCGAGAAAAATGAGAGAAGACCAAATTGCGCTAAGAGCCACTATTTTGGAGCACGAAAATGCGATTTTAAGGGCACAGGTGTTGACTTTAAGAGAGGAAACGTCGTCTCTGAGGCAAATGCTGCTCCAGAAGAAAGCGCTAGAAATCGCCGCAAGAGACACGCAAATTTGCGGCTCTTGA
- Protein Sequence
- MDQNVHYNFGGGAGNSLLPVSAFSAYSLLRRCNYFLTPQAPEIHAKAAPVQRIPPEDISCKDNEKCFLNLPSPPLFGYPHHLPPNEQLNTRLNATSPCSSLYSANFRRQRGEKKPIPEEQKDEKYFERRRRNNQAAKKSRDARKMREDQIALRATILEHENAILRAQVLTLREETSSLRQMLLQKKALEIAARDTQICGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01480608;
- 90% Identity
- -
- 80% Identity
- -