Tcas009435.1
Basic Information
- Insect
- Tribolium castaneum
- Gene Symbol
- Jra
- Assembly
- GCA_000002335.3
- Location
- NC:14555129-14556461[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.5 6e+03 -3.2 0.3 41 52 10 21 5 28 0.45 2 2 9.8e-16 6.2e-13 48.1 10.7 4 65 154 215 151 215 0.94
Sequence Information
- Coding Sequence
- ATGAGCGGACCCAACTTTGAAAGTCAGCAAAAAAACCTCAGTAACATGAAGAAAAATCTCACTCTTGATCTTAATCAGTCGAAAATGAACATGAACCTATCGTTATCCCCCGACATCACGTCCGTCCTCAAAGTAGATACCCCTGACCTCCTCAAAGTGGACACACCCACCATTGAGAACATCATCTTGGCGAATAATATTTCACACACGCCTTCCCCTTCACTTATCTTCCCGCGGGACGTCACTGTGGAGCAAGAGAAGTTTGCAGGCGGTTTCGTCGAAGCGCTTAATTATCTTCACAATGGCAATTCTCAGCAAGGTTCTGACAGTAATGCCAGTACGGTTTACAGCGAACAGCAGAATTTCATGCCTGTGATCAAAGAGGAGCCCCAAACGGTGCCCAACGTGAATAATACGCCCCCAATGTCTCCTGTCGATATGGAATATCAGGAAAGAATGAAATTGGAGCGAAAGAGACAAAGGAATAGACTCGCAGCCTCTAAATGTCGTTCCCGCAAATTGGAACGAATCTCGAAATTGGAGGATAAAGTCAAACTGTTGAAAAGTGAGAATGTTGAATTGGCTTCAGTGGTCAACCAGTTGAAGGAACACGTGGGGATGCTCAAATTGGAAGTGATGGAACATGTGAATGCTGGCTGTCCCATCATTGCGGGACAGTTTTAA
- Protein Sequence
- MSGPNFESQQKNLSNMKKNLTLDLNQSKMNMNLSLSPDITSVLKVDTPDLLKVDTPTIENIILANNISHTPSPSLIFPRDVTVEQEKFAGGFVEALNYLHNGNSQQGSDSNASTVYSEQQNFMPVIKEEPQTVPNVNNTPPMSPVDMEYQERMKLERKRQRNRLAASKCRSRKLERISKLEDKVKLLKSENVELASVVNQLKEHVGMLKLEVMEHVNAGCPIIAGQF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00852427;
- 90% Identity
- iTF_01480604;
- 80% Identity
- -