Basic Information

Insect: Triatoma rubrofasciata
Gene Symbol: -
Assembly: None
Location: chr11:24643477-24647585[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.8 49 4.2 0.1 1 20 202 221 202 223 0.92

2 10 7.3e-05 0.0045 16.9 1.9 1 23 282 305 282 305 0.96

3 10 4.3e-06 0.00026 20.8 4.0 1 23 311 333 311 333 0.98

4 10 8.3e-07 5.1e-05 23.0 5.8 1 23 339 361 339 361 0.98

5 10 2.3e-05 0.0014 18.5 0.9 1 23 367 389 367 389 0.97

6 10 0.00044 0.027 14.5 0.5 1 23 395 417 395 417 0.95

7 10 5.4e-06 0.00033 20.5 1.2 1 23 424 446 424 446 0.98

8 10 0.00017 0.01 15.8 4.9 1 23 452 474 452 475 0.96

9 10 0.00028 0.017 15.1 0.5 1 23 481 503 481 503 0.95

10 10 0.0004 0.025 14.6 4.1 1 23 509 532 509 532 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.8	49	4.2	0.1	1	20	202	221	202	223	0.92
2	10	7.3e-05	0.0045	16.9	1.9	1	23	282	305	282	305	0.96
3	10	4.3e-06	0.00026	20.8	4.0	1	23	311	333	311	333	0.98
4	10	8.3e-07	5.1e-05	23.0	5.8	1	23	339	361	339	361	0.98
5	10	2.3e-05	0.0014	18.5	0.9	1	23	367	389	367	389	0.97
6	10	0.00044	0.027	14.5	0.5	1	23	395	417	395	417	0.95
7	10	5.4e-06	0.00033	20.5	1.2	1	23	424	446	424	446	0.98
8	10	0.00017	0.01	15.8	4.9	1	23	452	474	452	475	0.96
9	10	0.00028	0.017	15.1	0.5	1	23	481	503	481	503	0.95
10	10	0.0004	0.025	14.6	4.1	1	23	509	532	509	532	0.97

Sequence Information

Coding Sequence: ATGACACAGTCAGTACGATTGGTTGTTCGATTGACCGAAATTCGTCATTGTAGGTTGTGTTTTAGCGAAGAAGTTAATGAACATTCCTTATTTCAAATGGTTGATGTTAATGGAATTTCACTCAGCACTAAGATAGTGTTGTGCACATCTCTAATGATGGCCCAGGAAGACCTGTATTCGGAATATATTTGTCATAATTGTGTACAAATGATTGAATTATTTTATGAATTCCGAAATACATGCTTGAAAACGCATATATCTATGTACAATGTGATACATGGAATTTCTCCATCGAAATATAATCTCATAGACCAAGAAAATGTGGAAAAGGAAAGTGGGGGAGACATCAGTGCTAATCCAGAAGTAGAAATATTCAATGAAAATAATGACACAGAACATTCAGTTGAAATTGAGTCAATGGATGTTGATAAAAGAGAAAACACATTATTAAGTACAACTCCAAATAAAGCAGAATTAAACGAACATGTTGATATTAATGAAGATTCTTCTAGACAGTTTCAGGTAGGATGTTATATACCAATTACAGATGCGGAGAATACTCATTGTAGCGACACTAAAGAAACTGACTTATTACATAGACGTTTTAAATGTATGAATTGTAAAAATGTTTATGCAACATTGTTGGAATTAGATAATCATTGGGATATGTGTGAAAATGTAAAAGCGGATAGAGAAATGAAAATACTTAACCAGGAGTTAGCTCATACCCGACATTCAGATGAAGTTTGTTATGAGGATACTGCCATCATTGAAACGATTGAACAGGAACAAAATATTGACAGGGAAGAATACAAACCAAGGAAACGATCATCTGGGAGAGAATTTTGTTGCGAATCATGCGGTCAGGTTTTTAAACAGTTATTACTATTAAAACGTCATATTCAGGTTAAACATGTATGTGTTCGGCCGTACAGTTGTCCTCATTGTCCTAGAAAGTTTTTTGACAAATATGAGTTAAAATATCATCAACGTTTGCACGAAGATATAGAAGATTTCTGTTGTAATATTTGCAAAAGGAGGTTTTCTAGAAGATCCGGGCTAAAGACTCATATGCGCAGCCATACTGGTGAAAAACCATTTGATTGTAATGTGTGCAATAGGAGTTTTGCTCATTTTAATAGCCTTATAGCTCACGAAAGGGTACACACAGGAGAACGCCCATACCTTTGTAACTATTGTCCAAGGACTTTTGCACAATATTCCACAGCTAAGAGCCACGAAGAGATGCATATGGGTGGTTTGAGAATGTTTCAATGTGAAATTTGTGATAGAATGTTTAAGACTGAAACAGATTTGTCAACACATCGTACATCCCACGAAGGTTTACATGAATATAAATGTTTATCTTGTAATAGAGGTTTCAAAAAACAATCCGATTTGAATAAACACAACCAAAGACATCATTGTGATAACAAACCTTATCCTTGTAATCAGTGTTCCAAATCATATGTTACTTTGAGAGAACTACAGTTACATTCAACTGTACACACGGGAGAATTACCTTTTACTTGCTTTTTATGTTCTAAAAGTTATCGTTTAAGTACGACACTAAAAAGACATATGTATAAGCAACATTCTAATTCAGTTGGTTTAAATACATTTGAAATGAACGTTGTTAAAACTTAG
Protein Sequence: MTQSVRLVVRLTEIRHCRLCFSEEVNEHSLFQMVDVNGISLSTKIVLCTSLMMAQEDLYSEYICHNCVQMIELFYEFRNTCLKTHISMYNVIHGISPSKYNLIDQENVEKESGGDISANPEVEIFNENNDTEHSVEIESMDVDKRENTLLSTTPNKAELNEHVDINEDSSRQFQVGCYIPITDAENTHCSDTKETDLLHRRFKCMNCKNVYATLLELDNHWDMCENVKADREMKILNQELAHTRHSDEVCYEDTAIIETIEQEQNIDREEYKPRKRSSGREFCCESCGQVFKQLLLLKRHIQVKHVCVRPYSCPHCPRKFFDKYELKYHQRLHEDIEDFCCNICKRRFSRRSGLKTHMRSHTGEKPFDCNVCNRSFAHFNSLIAHERVHTGERPYLCNYCPRTFAQYSTAKSHEEMHMGGLRMFQCEICDRMFKTETDLSTHRTSHEGLHEYKCLSCNRGFKKQSDLNKHNQRHHCDNKPYPCNQCSKSYVTLRELQLHSTVHTGELPFTCFLCSKSYRLSTTLKRHMYKQHSNSVGLNTFEMNVVKT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01301798;
90% Identity: -
80% Identity: -