Basic Information

Insect: Triatoma rubrofasciata
Gene Symbol: -
Assembly: None
Location: chr2:65062226-65076938[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.0014 0.082 12.9 0.9 1 23 247 270 247 270 0.93

2 11 4.9e-05 0.003 17.4 1.2 1 23 308 331 308 331 0.97

3 11 0.00016 0.0099 15.8 1.3 1 23 345 368 345 368 0.91

4 11 2.9e-06 0.00017 21.3 4.3 1 23 374 396 374 396 0.97

5 11 0.00059 0.036 14.1 4.3 1 23 402 424 402 424 0.97

6 11 1e-05 0.00062 19.6 3.4 1 23 430 452 430 452 0.98

7 11 8.7e-08 5.3e-06 26.1 2.5 1 23 458 480 458 480 0.98

8 11 6.1e-05 0.0037 17.1 3.7 1 23 486 508 486 508 0.98

9 11 1.1 66 3.8 6.6 2 23 515 536 514 536 0.92

10 11 0.00023 0.014 15.3 0.4 1 23 542 564 542 564 0.97

11 11 9.6e-07 5.8e-05 22.8 4.3 1 23 570 592 570 592 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.0014	0.082	12.9	0.9	1	23	247	270	247	270	0.93
2	11	4.9e-05	0.003	17.4	1.2	1	23	308	331	308	331	0.97
3	11	0.00016	0.0099	15.8	1.3	1	23	345	368	345	368	0.91
4	11	2.9e-06	0.00017	21.3	4.3	1	23	374	396	374	396	0.97
5	11	0.00059	0.036	14.1	4.3	1	23	402	424	402	424	0.97
6	11	1e-05	0.00062	19.6	3.4	1	23	430	452	430	452	0.98
7	11	8.7e-08	5.3e-06	26.1	2.5	1	23	458	480	458	480	0.98
8	11	6.1e-05	0.0037	17.1	3.7	1	23	486	508	486	508	0.98
9	11	1.1	66	3.8	6.6	2	23	515	536	514	536	0.92
10	11	0.00023	0.014	15.3	0.4	1	23	542	564	542	564	0.97
11	11	9.6e-07	5.8e-05	22.8	4.3	1	23	570	592	570	592	0.98

Sequence Information

Coding Sequence: ATGACATCACAAGAAGTGGAACATTTCGATGACGTAAATCCCCATAATTTATATGATTCTGCTTATTGTAGACTGTGTTGTGAAGAAAATAGTTGTGGTATTAATTTATTCAAAGAAAAATTTGATAACCAAAATTTGTTTGCCCTAATAAACGTTTATCTACCAATATTTGTTCAGGATGATGGAAAATTTCCTCAAACCATTTGCCCAGGTTGTCATATTCAACTGCAAGCAACCATTTCATTCTTCGACCTACTAATTTCTGGCCAGCAAAAATTGCGAGATTTGTTAAATAATAAACATAATGGTAGAGATGAAACTTCTGTCAATGAAGTATCAGAAAAATCTGGCAGTGGTCCACTATTCACAAGTGATCATCAGTTACATCAAAAGATTACTGGCTTGGACAAACCTAAGAGAGGAAGAGGACGTCCACGTAAAACCGTGTTGTCAGAGTGCACTCCTCCAGCTGCCACAGCTGTATTGAATCACCAGCCAAAGAGGAAAAGAAAATGTCCTGCAAGATTGGAAGGCACTGTGAATGGGCAAGAACTGGAAGATATTTATCTTGAAGAAGGTTTAATACATCCTAATGAAAAAGATTCTACCGAACTGCTTCCAAAAGATCCTGAAGTAATTGGGCATGTTCGAAGTGAAGGTCTGCAGCAAGGTGGGTGTGAAGTAGTCATCCAATCAAACAATCAAACGACAGGACTAAAACCGCGCACAACGATACAATTTAAGTGCGATGTTTGCGGTGCTGCGTACACCCATGAACCTAAATTGCATAAACATCGCGCTGAAGCGCACGAAATACACACTAACGATACAAATCCAGTCAACTGTGATATTGATAGTGCAGCACCAACATCATCAACACTACCAGATATTAGTAATGAAGATGTGGATAAAAAGAATAGATATACCTGTTCTATATGCAATAAAAAATTTAGGCTTGGATCCAGTCTGAAAGGCCATATGCTGTCACGTCATTCTTCTGGAAGCATAGTTGAACAAACCGAACAAGGTATATATCCTTGTAAATCGTGTGATAAGAAATTTGTACATTCATCTTCACTAGCTTATCACAAAGAAGCGGTACACAATAAAGGAAGATTATATGCTTGCAATAAATGTGATAAAACATTCAGACATCGGCAGCTTTTACGACGACATCAAACGGTTCATTCGGAAGTTCGAGCATATTTCTGTGATAAATGTGAAAGTAGTTTCAAAACGAAGGCCAATCTGATGCACCATAAATCAAGTCATGCCAAAGAAAAGAAATATTATTGTCATATCTGTGGAAATCAGTTTACCTACAAGACTAGCCTTACTCTGCATATTAGGAGCCATACGGGCCAAAGACCGTTTGAATGTGCTGTGTGTCATAAAAGGTTCACACAAAAAGGAAACCTTAAGGAGCATATTAGGACCCATACAGGTGAAAAACCATTCGAATGCCAAGTTTGTGAAAGGAAATTTACTACTTCATCGCAGTTCAGACTTCATTTTAAAAGACATATAGGTTACAAACCATGGAAATGTGAATATTGTGGGAAAGCGTTTCTTCATAAGAATACTTGGCATTGTCATTTGCGGAGACATCGAGGTGAAAAACCTTTTGAATGTAAAATCTGCCTTAAAACTTTCCCAGAATTATGGGCCTTAAGAAAACATAGTCGTCTACATACTGGGGAAAAGCCATATGCTTGTCCGACTTGTAATAGAACATTCTCTGATTGTTCTAATTTGAAAAAACATAAAAAGATGCATTTGTTAAATGAACAAAAATCTGCCGAAGTCAATAACAAAACCACCAACACTGACTTAAAACCGAATGAAGAAACTAACAATTACACAGATGATCAGATGTGGACATTAATTAGCCGTGATGCTGGTAATGATGTTGATATTAATGGTAGAGATGGACAAATAATATATCTCACTTTAGAAGATTCTGCAGTTCCTGGTGACAGAGATCAAGGTGAAGTAGAAGAGGAAGAAGAAGAAGAAGAAACAGAAGAGGAAGAAATTGCAGAAGAGCCTGTCCAGCAAACAGGAAATGAATTGAATAGAATATTTGTACCAGCCATGCATGTGATAGATGAAGACGGAAATCCATTTAAATTTGCAACGGATGGCACTCTTTTCCAAGTTACAACAATGGATGGAGAACCTCTGCAAGTTGCTCTTGGAGAAGATGACAATCATTTTCCCATAACTATAGCAGCTAATGGGGAATCAATAATTCATCAGATAAAGCCGTTAACTAACATTCCAATCGTAGGAAACATCGAAGAGAATATTACGGTTGCACCAAGAACTGCTGATGGAATAGAATTCGTATCAGATGATCAACACTTTAAATTAATTTCTGATTTGAACACAGCAGCGCTAAACCTTACTTCAGAATACCTTGAAATTGTATAA
Protein Sequence: MTSQEVEHFDDVNPHNLYDSAYCRLCCEENSCGINLFKEKFDNQNLFALINVYLPIFVQDDGKFPQTICPGCHIQLQATISFFDLLISGQQKLRDLLNNKHNGRDETSVNEVSEKSGSGPLFTSDHQLHQKITGLDKPKRGRGRPRKTVLSECTPPAATAVLNHQPKRKRKCPARLEGTVNGQELEDIYLEEGLIHPNEKDSTELLPKDPEVIGHVRSEGLQQGGCEVVIQSNNQTTGLKPRTTIQFKCDVCGAAYTHEPKLHKHRAEAHEIHTNDTNPVNCDIDSAAPTSSTLPDISNEDVDKKNRYTCSICNKKFRLGSSLKGHMLSRHSSGSIVEQTEQGIYPCKSCDKKFVHSSSLAYHKEAVHNKGRLYACNKCDKTFRHRQLLRRHQTVHSEVRAYFCDKCESSFKTKANLMHHKSSHAKEKKYYCHICGNQFTYKTSLTLHIRSHTGQRPFECAVCHKRFTQKGNLKEHIRTHTGEKPFECQVCERKFTTSSQFRLHFKRHIGYKPWKCEYCGKAFLHKNTWHCHLRRHRGEKPFECKICLKTFPELWALRKHSRLHTGEKPYACPTCNRTFSDCSNLKKHKKMHLLNEQKSAEVNNKTTNTDLKPNEETNNYTDDQMWTLISRDAGNDVDINGRDGQIIYLTLEDSAVPGDRDQGEVEEEEEEEETEEEEIAEEPVQQTGNELNRIFVPAMHVIDEDGNPFKFATDGTLFQVTTMDGEPLQVALGEDDNHFPITIAANGESIIHQIKPLTNIPIVGNIEENITVAPRTADGIEFVSDDQHFKLISDLNTAALNLTSEYLEIV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -