Trub003871.1
Basic Information
- Insect
- Triatoma rubrofasciata
- Gene Symbol
- -
- Assembly
- None
- Location
- chr1:81832160-81847360[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 28 0.00018 0.011 15.7 3.3 1 23 161 183 161 183 0.95 2 28 3.3e-05 0.002 18.0 1.2 1 23 194 216 194 216 0.98 3 28 0.0047 0.29 11.2 3.3 1 23 238 261 238 261 0.97 4 28 0.0065 0.4 10.8 0.4 2 23 268 290 267 290 0.95 5 28 0.017 1 9.5 0.2 1 23 382 405 382 405 0.93 6 28 0.014 0.87 9.7 0.8 1 23 435 458 435 458 0.95 7 28 0.34 21 5.4 0.8 3 23 466 487 465 487 0.96 8 28 0.00018 0.011 15.7 0.6 2 23 566 588 565 588 0.97 9 28 0.066 4 7.6 0.5 2 23 634 657 633 658 0.90 10 28 0.0068 0.41 10.7 0.1 2 23 667 689 667 689 0.95 11 28 0.0023 0.14 12.2 0.1 1 23 695 718 695 718 0.97 12 28 0.0013 0.081 12.9 2.5 1 23 726 748 726 748 0.97 13 28 0.0012 0.075 13.0 0.6 2 23 821 843 820 843 0.95 14 28 0.00034 0.021 14.8 3.5 2 23 850 871 849 872 0.95 15 28 0.0043 0.26 11.3 2.8 2 21 890 909 889 910 0.94 16 28 4.3e-05 0.0026 17.6 1.8 1 23 929 952 929 952 0.98 17 28 0.35 21 5.3 0.5 1 23 955 978 955 978 0.95 18 28 4.4 2.7e+02 1.9 1.3 6 23 1020 1038 1015 1038 0.81 19 28 0.36 22 5.3 0.1 2 23 1045 1067 1044 1067 0.93 20 28 0.0021 0.13 12.3 1.4 2 23 1076 1097 1076 1097 0.97 21 28 0.044 2.7 8.2 0.4 1 23 1102 1124 1102 1124 0.96 22 28 0.0016 0.097 12.7 0.4 1 23 1183 1206 1183 1206 0.93 23 28 0.12 7.3 6.8 0.5 2 23 1294 1316 1293 1316 0.95 24 28 2.5 1.5e+02 2.7 0.7 2 23 1323 1345 1322 1345 0.93 25 28 1.8 1.1e+02 3.1 1.0 2 23 1357 1378 1356 1378 0.91 26 28 0.0044 0.27 11.3 0.0 1 23 1438 1460 1438 1460 0.98 27 28 0.00032 0.02 14.9 0.9 1 23 1466 1489 1466 1489 0.94 28 28 0.0019 0.12 12.5 0.4 1 21 1494 1514 1494 1515 0.94
Sequence Information
- Coding Sequence
- ATGAGTAATCCAGAGGTAGAAAATTATGAGGAATTATGTCGGTTGTGTGCATCTTATGATGCCATTAAAATGGATATTTTTAGTGACAAAGGAAAAAAAAGAAGACTTGTGGATAAAATAACAACTTGTCTTCCTTTTGAGGTGTCAGAAGATGATTTGTATCCTAAATCATTATGTTATCGTTGTATATATAATTTGGAAACATTCTATGACTTTCGTCGAGGTTGTATTGCTGCAAAGGCTAAGCTGGAAACAGTGATTAAACGAGCTAATGAAAAGATTTCAAGGGATAAAGTGGAATCTAATGATGTAGCTGGCAAAGTGCGTGGGTTTTCTTCTAATCATCTTCAGGAAAATGAAGAAGGAATTATAGTGTCAGATGACGAACAGCAACCCAATCCAGCCGACTTTCTTGAAGCTTGTTTGGGAGAATCACCACATCATTCCTTGGGAACCAAACAAGATGAGGAATGGGGGCCATTTTGTTGCAAGACTTGTGGGCGTATGTTTAATTCAAGAAGCGCCCTCACAATTCATGCAAAATTTCATCAAGAAAAGAGTGATGCTGAGAGGGAGGTATTTTCTTGTTATGTTTGCGAGAAAGTGTTTTCAAGCAAAGGTCATTTGGCACTGCATTCAAGGGTTCACATTGGAGAAACCAACTCTCCTATGCTTGCTAATTCTAGAGGATCAAGTCCACAAATTAAATTATACCGTTGTGACTTATGCAGTAAATCATATTCAATGGCTAAGCATCTGTGGGGCCATGTAAGTACATGTCATAAGGGTGATCCTTTAGTTACATGTGCACTTTGTATGCGAACATTTTCATCAATATCCAACCTTGAAGACCATAGGAAGGTGAAACACAAGGACGAGATCATTGAAAGACCGGTAAAACTACCACCGCCGCCACCACCACCACAATTACTACAACATCCGCAGCTTGAAAATGTTAGAATACCAAATGAACTTGTTGTCACCATAGCAGGAGGAGATGATTCCAGTGAAACAAAAAATCAAGAAGAAAATACAATATCTAACAAAAGAAAAAGTACCAAACCAAGAAAAATTGAAAGAGAATCAACAGGGCTACCAGGTGAAGGTGAAGATCCGCAAAGGATGAATCAAGATGGATTACTGTATTCATGTATTGTTTGTGGGGAAAGGTTTATTGATCTACAGAAATTGAGGGAACACTTGTCTTCTTCTCATAATTATGAAGAACCATTAGATTTTGATAATCTCGGGGATTATGGTGAAAATGAATATGTTGACAGCATGATGGAAGCGGAAACTGTTTTCTGCTGTGAAATATGTATACGAGAATTTAATGATCGTGCCTCATTGTGGCTTCATATGCTTTATTCTCACAGAGAGGAGGCTTCCAAGGCTTGTGGTATTTGTTTAAAAATATGTGGAGATACAGAAAATCTAGCGCAACATGTTGAAACATGTCATCCAAAAAATAAGACTGATCAGCGAAGGTATAGCTGTCAGGTTTGTGCTAGGCAACACGATTCTAGAAAGAAACTGGTTACTCATGCTAAAATCCATAAATTAACTGATAGTCAGGGTAAGTTAGTTGATCCAGAATCAGTGGTGGTGCTCAACAGTGATTATTACCCACAAGATATGGTAGGAGGTCAACCAGGAATGCTTCCCATGCAAACAGATGATAACAACTTCTTATCCAGTTGTGATATATGCTTCAAAGTGTTTGAAAATGAAGCTAAATTAAGTAAACACAAGCGTACGGCCCATAAAGAGCTTAATTCATCAAATAATGCCAGTCCGTATCATTTCTTTTTCGCTTGTGAGTTGTGTGGACTATCACATCTTTCTCGTTCTGAACGGTGGCGGCATATGGTACTGTCACATTCTGGCGATCCTGCAGTAACTTGTCAGCAACAAGAATGTGGAAAAGTATTTCCAACATCAGCTGTTAAACGTGAACATGAAGAAACCCATCATGCCATTCAGGGCCAATATCCAAATACTTGTGAAGTTTGTGGAAAGATGTGGAAGACAAGAGTGGAATATTGGAAGCATATGATGGGCGTACATACTGATTATTTGCCCTTTGTATGCGGAGTTTGTTTGAAGGTGTTTACTGAACTGTCTCCACTAGTCAACCACGTTAGATCTACTCATTGGCCCTTGTTGGGTGGTGATTTTTGTTGTGACATATGTGGCCGTCCATATTCTAAAGTATCAAAGATGTCTCGCCATAGAAAGGTCCACTATGTACCAACGAATTGTCCAGAGATGAGAGCTATCTTAGAAAATCCAAAGATTGAAGGTGTTGCCGGTACAATTAAAGTGGGCAACGACAGACATTTCTTACAAAATGATTTTCCAGCACTCTGTTGTGATCTTTGTCAAAATGTTGAAGAGCGTGTGGACTTCGCGAATCTAGAAGAATTAGGAAAACATAGATTTGAAAAACATAATGTTATGCCTTGTGATCTTTGTCCAAAATACTATGGCCGTACATCTCATCTTTGGAAACACGTTAATAAAATACATAAAGGTCATCCAGATGTTACGTGTCCTGTTTGCCATCGTACTTCAGCATCTAAATCTCACCTTGCCACACATATCGCCAAACATCATAAATCGTCTGCAGACACAGACTGCTATGAGAGAGGAGAAAACGGTGTCACAAAATGCAGCAAATGTAAAAAAGTATTTAGAAAAGAATCATTGGTCAGAAAACATGTTAAACATTGCAAAGGCCCACGTCCTGAACCAATAGCCTTACCACCACCTGTCGATGGAATGTATACTTGCGAAAGATGTAATAAAACATTCACCGCAGAGAATCTGCTTTATAAACACATGCGAAGTTCTCATATAATGTACAAATGTGAATTATGCCAAGCTAAGAAAAGTTCCAAAGCAGATTTATACAACCACGTTAAAGAAGAGCATGGTGATCATCCAAATGTTAGATGTGCAATTAGAGATTGCACACAGATTTTAAGATGTAAAGCGGATCTTGATCGTCATGTAAGGGATCATAGACAGAATTCTCAATTGCACATATGCATATTCTGTGCAGAGTTGGTCACCAGCAAGTTTAAATTAAAACGTCATCTTAAATCAATTCATGCCCAGGAATCGAAGTTCTTATGCTTCCTTTGTCTAAAACCACTCGCAAGTTTCGAGGAGTTGAGGGCACACATTGTAACCGCGCATGCAGCTGCACTGGAGAGACCAAATACTTGTCCGATATGTGCAAAACCTTGTTCCAGTAAGTCAAAAATGATGGAGCATATAAAATATCACGGTCCAACATTCCATCCATGTCGGATTTGTTTGAAAATTTTGCCATCACGAAACGAGCTTGAATCACATTTGAATAACCATCCTACCGACTCTGGAGATGAAGATGATCTACAGATTGATGAAGCTGCCCTAGATCCGGATAGTATCATGGATATCATTGGAGCCCCAACGGATATCAAAGTAAAACGAAATATTGAAGAGGAAGAAAAGAATCAAACTGAAGGCGAACCACCTAATAAAAAGGTGAAAATTGAATATCCATGTGATGGATGTGAAACTTCATTTACTACTGATTCTGAACTAGCAGAACATTGTAGATCTGCTCACAAAGATGACAGCAATAAGACAAGCATCCTAGAGTCTGTATTGTCCGAAGGCAAACAACCACGTATAAAACAAGAAGATGTAGAAATTGTAGAAAGTCGTAAAGAAAATGGAGTTACTAGCAGCAGTGTAAAGACTGAGTCTGATAAAAACTTTATGCACCAGCTGGGATTGATGCCCGATACTACCGATAAATCTTCAATAACGCCGATTTCGAAAATAAAAATTGTAAGAAAAGTATATATAAACGATGATACCCCTAGTAAATGTGAAATGTGTGGTAAAGAATGGCCGGCAAAGAGGCATCTTTGGCAACATCTTATCAGATATCACCGTGCAGAAGCGAGTACAACTTGTGGAGTTTGTTTGAAGTATTGTTCTTCTTACGCGAGATTGAGTGTTCATTTAGTAATGGATCATCCAGACATATTTGACGGGGATGGTACAAATTTGTCTTGTAAAGTTTGTGGAAAATATCACAATGCCAGATCTAAACTGTTGAATCATGCCTCAGTACATGGAGCAGAAGAGGAAAGAGCTCAGGCATCATATCATTGCTGTCTAATTTGTGAATCTACGTATCACGCTTTTCCACACTTAGCGAGTCATATGGAAGTGGAACATAAGAAGGAGATGGTTCAAGATAAGGTAAGGAAACCACCACAACCACCAAAAGGTACAGAAAAATTGCCTTTTTTTTCTTGTGAAATATGTTCGCTGGTGTTCGCATCTGGAATTGGTCTAGCTAATCATAGGCGTATACATGAACATTCTGATAGATTTAAGTGTGGCCAATGTGGTGAAGTTTGTACTACCGCCGATGCTCTCACCTCGCATAAATTACAACGCCATCAAGGCGCCGAATTTGTTTGTGCTGATTGTAAAGCTCAATTTTCTACGTATTCCCAATTGACAGAACATAATAGAAAATGTAAGGCAAAAGCTAGACATTTCTCTGAAACTGCCAGTTCTGATTTGATGGTATCGCTTGAGGCAGAAGATGAGGGTGAAAATGATGAAGAAGAAGTTGACGAGGATGAAGATGTAGATGCAGAAGAGGAAGTTGAAGAAGACGATGACGATGAAGATAACTCTGATGTTGATGAAAAATCTAAAGATGTTGAATCTTCTCTTGAAGGTGAAACAGAGGATATTGAAGATGTTGTTGAAACTAAATCTGGAGATGAAGAGGAAGAGGAAGATGAAGATGATGATGTCGAAGAGGAAGTTGGTGATGATGAGCCAGCCGAAGGAGATGATGATGAAGAAGTTGATGGGGATGGCGAGGAAGTTGATGGGGAAGAAAATGATGGTGAAGCGGAAGATGGCGAAGGTGAGGAGGATGTTGAGAATGATGTCGAAGAAGCTGAAGAGATGGAAGTAGAAGAGGAAGATGAAGATGATGATGTCGAAGAGGAAGTTGGCGATGATGAGGAAGGAGCAACAAGTATAACAGAAGATCAGAAAGAGGTAAAAGCTATTGAGGCTTACATGTGTGAAGAGAACATGGTTGAAGTTGTACAAGTTGATCTTTCCGATGATGGATCCAGTTCCAAACCGATTGATAACTAA
- Protein Sequence
- MSNPEVENYEELCRLCASYDAIKMDIFSDKGKKRRLVDKITTCLPFEVSEDDLYPKSLCYRCIYNLETFYDFRRGCIAAKAKLETVIKRANEKISRDKVESNDVAGKVRGFSSNHLQENEEGIIVSDDEQQPNPADFLEACLGESPHHSLGTKQDEEWGPFCCKTCGRMFNSRSALTIHAKFHQEKSDAEREVFSCYVCEKVFSSKGHLALHSRVHIGETNSPMLANSRGSSPQIKLYRCDLCSKSYSMAKHLWGHVSTCHKGDPLVTCALCMRTFSSISNLEDHRKVKHKDEIIERPVKLPPPPPPPQLLQHPQLENVRIPNELVVTIAGGDDSSETKNQEENTISNKRKSTKPRKIERESTGLPGEGEDPQRMNQDGLLYSCIVCGERFIDLQKLREHLSSSHNYEEPLDFDNLGDYGENEYVDSMMEAETVFCCEICIREFNDRASLWLHMLYSHREEASKACGICLKICGDTENLAQHVETCHPKNKTDQRRYSCQVCARQHDSRKKLVTHAKIHKLTDSQGKLVDPESVVVLNSDYYPQDMVGGQPGMLPMQTDDNNFLSSCDICFKVFENEAKLSKHKRTAHKELNSSNNASPYHFFFACELCGLSHLSRSERWRHMVLSHSGDPAVTCQQQECGKVFPTSAVKREHEETHHAIQGQYPNTCEVCGKMWKTRVEYWKHMMGVHTDYLPFVCGVCLKVFTELSPLVNHVRSTHWPLLGGDFCCDICGRPYSKVSKMSRHRKVHYVPTNCPEMRAILENPKIEGVAGTIKVGNDRHFLQNDFPALCCDLCQNVEERVDFANLEELGKHRFEKHNVMPCDLCPKYYGRTSHLWKHVNKIHKGHPDVTCPVCHRTSASKSHLATHIAKHHKSSADTDCYERGENGVTKCSKCKKVFRKESLVRKHVKHCKGPRPEPIALPPPVDGMYTCERCNKTFTAENLLYKHMRSSHIMYKCELCQAKKSSKADLYNHVKEEHGDHPNVRCAIRDCTQILRCKADLDRHVRDHRQNSQLHICIFCAELVTSKFKLKRHLKSIHAQESKFLCFLCLKPLASFEELRAHIVTAHAAALERPNTCPICAKPCSSKSKMMEHIKYHGPTFHPCRICLKILPSRNELESHLNNHPTDSGDEDDLQIDEAALDPDSIMDIIGAPTDIKVKRNIEEEEKNQTEGEPPNKKVKIEYPCDGCETSFTTDSELAEHCRSAHKDDSNKTSILESVLSEGKQPRIKQEDVEIVESRKENGVTSSSVKTESDKNFMHQLGLMPDTTDKSSITPISKIKIVRKVYINDDTPSKCEMCGKEWPAKRHLWQHLIRYHRAEASTTCGVCLKYCSSYARLSVHLVMDHPDIFDGDGTNLSCKVCGKYHNARSKLLNHASVHGAEEERAQASYHCCLICESTYHAFPHLASHMEVEHKKEMVQDKVRKPPQPPKGTEKLPFFSCEICSLVFASGIGLANHRRIHEHSDRFKCGQCGEVCTTADALTSHKLQRHQGAEFVCADCKAQFSTYSQLTEHNRKCKAKARHFSETASSDLMVSLEAEDEGENDEEEVDEDEDVDAEEEVEEDDDDEDNSDVDEKSKDVESSLEGETEDIEDVVETKSGDEEEEEDEDDDVEEEVGDDEPAEGDDDEEVDGDGEEVDGEENDGEAEDGEGEEDVENDVEEAEEMEVEEEDEDDDVEEEVGDDEEGATSITEDQKEVKAIEAYMCEENMVEVVQVDLSDDGSSSKPIDN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01478954;
- 90% Identity
- iTF_01478954;
- 80% Identity
- -