Basic Information

Insect: Triatoma rubrofasciata
Gene Symbol: -
Assembly: None
Location: chr7:5230570-5236587[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.00011 0.0067 16.3 3.3 2 23 16 38 16 38 0.95

2 17 0.052 3.2 7.9 1.7 1 23 41 63 41 63 0.96

3 17 3.8e-05 0.0023 17.8 0.3 2 23 70 91 69 91 0.97

4 17 0.00054 0.033 14.2 0.9 2 23 98 119 97 119 0.97

5 17 0.036 2.2 8.4 1.0 2 23 126 148 125 148 0.95

6 17 0.00012 0.0071 16.3 4.6 1 23 153 176 153 176 0.97

7 17 3e-06 0.00018 21.3 2.3 1 23 183 205 183 205 0.95

8 17 1.2e-05 0.00071 19.4 0.8 1 23 210 232 210 232 0.98

9 17 6.8e-06 0.00042 20.1 3.4 1 23 262 284 262 284 0.96

10 17 0.00052 0.031 14.2 2.6 1 23 288 310 288 310 0.98

11 17 0.027 1.6 8.8 2.2 2 23 317 339 316 339 0.95

12 17 0.00041 0.025 14.5 6.4 1 23 346 368 346 368 0.98

13 17 0.062 3.8 7.7 1.9 1 23 377 400 377 400 0.94

14 17 0.00093 0.056 13.4 2.5 1 23 405 427 405 427 0.97

15 17 1e-06 6.1e-05 22.8 0.2 1 23 433 455 433 455 0.97

16 17 1.6e-06 9.6e-05 22.1 1.7 1 23 461 483 461 483 0.98

17 17 0.0061 0.37 10.9 6.7 1 23 489 511 489 511 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.00011	0.0067	16.3	3.3	2	23	16	38	16	38	0.95
2	17	0.052	3.2	7.9	1.7	1	23	41	63	41	63	0.96
3	17	3.8e-05	0.0023	17.8	0.3	2	23	70	91	69	91	0.97
4	17	0.00054	0.033	14.2	0.9	2	23	98	119	97	119	0.97
5	17	0.036	2.2	8.4	1.0	2	23	126	148	125	148	0.95
6	17	0.00012	0.0071	16.3	4.6	1	23	153	176	153	176	0.97
7	17	3e-06	0.00018	21.3	2.3	1	23	183	205	183	205	0.95
8	17	1.2e-05	0.00071	19.4	0.8	1	23	210	232	210	232	0.98
9	17	6.8e-06	0.00042	20.1	3.4	1	23	262	284	262	284	0.96
10	17	0.00052	0.031	14.2	2.6	1	23	288	310	288	310	0.98
11	17	0.027	1.6	8.8	2.2	2	23	317	339	316	339	0.95
12	17	0.00041	0.025	14.5	6.4	1	23	346	368	346	368	0.98
13	17	0.062	3.8	7.7	1.9	1	23	377	400	377	400	0.94
14	17	0.00093	0.056	13.4	2.5	1	23	405	427	405	427	0.97
15	17	1e-06	6.1e-05	22.8	0.2	1	23	433	455	433	455	0.97
16	17	1.6e-06	9.6e-05	22.1	1.7	1	23	461	483	461	483	0.98
17	17	0.0061	0.37	10.9	6.7	1	23	489	511	489	511	0.99

Sequence Information

Coding Sequence: ATGTCATTAGCTGAAGAAGAAGAAGATACAATAATTGGAACAAACACATGTGGAGATTGTGGCCAACAATTTAAGACAAAATTAACATTAAGAAAACATATAAAAGAATGTCATTCAAATTATGTTTGCCGGGAATGTGGTGCAAAGTTTACATGTATAAGGTACTTGGCCAGACATGAATCACGACACACAGCAAAAGCTACGATTCCATGCAATCTATGCGACAAATTATTTATAAACAATTCAGAAATGAGAGAACACCAGAAATCGCATAAAATTGGCGAGCCAATAACGTGTACTTTGTGCGGTTATGTAACTTTATATAAATCGAATCTGTCTAGACATTTGAAAAGGCATAATAAAGATTATACAGTTTATTGTGAACAATGCGGTGATGGGTGTTATAATAAAGATGAACTTTACAGTCATCAGATCAAAAAACACGGCGCAATACCCTATTATTGTACAGTTTGTACGAAAACATTTACAAGTCGTGGTTGTTTGAATGAACACAATAAGACCACACATTGCACAACTACTAAAGACTTTCTATGTAAAACTTGTGGGAAAGCGTTTAAAACTAAAACAGCTACTAAACGTCATATGAAAGTGCATTTGGGTTTGAAATTTCGTTGTAATCTATGCAATAAAGCTGTCAATTCAGCGTATTCACTTAAAAAACATTTGAAAGCACATTCTGAAAGTTCAAATTCGAGAAATGTCGCCGAAAAAAATATGGAAAAATCTACAGAGAAAAATGAAAAAGCAAAAAAATCCAAGGAATATCTGTGCAATGAATGTGGGAAAAAATTTAACGATAAAGAGAAATACTGTAGACATATAGACACACATGTGAAAGTGTATAATTGTAGTGAATGCACTTACAAAAGTAAATATGCAACAAACTTTAAAATACATATGATGAAACATAGAGGTGAATATTTGATCAAATGTAAAGTTTGTAAAAAAGGATATTATAATATGCAATATTATAGAGATCATTTTAGATTGAAACATAGTAATGAAATATCAACATTTAAATGCCACGAGTGTGATCACATTTATAGGAGTAAAGTGAGATTAAAGCAGCATTTAAGATATCATACAACACATTTGAATGGTCAAAAATATCAGTGTGAAATTTGTGGCAAATTATGTTTATCATATAAAGGTATGAAAACGCATCGCCTGACCATACACGAAGATAGCCGTCATACTTGCGATATTTGTAATAAAATCGTCACATCATTGCAATCGTTGAAATATCACAAAATGAGGCATAAACGTGAAAAAACACATGTTTGCGACATTTGTGGTAAAGGTTTTATTGGGCAGAGTAACTTATTGGTACATAAAAGGATACATACAGGTGAACGGCCATACAAATGTAATCTGTGCGACCGCAGTTTTACACAGAAAATTACTTTAATTGTGCATAAAAGGCAGCACAATGATGAACGCCCGTTTCAGTGTATGTTTTGTGATAAAAGATATGTTTGCAAAACGAATTTGAATAGACATAAGAAGACTCACAGATCTTAA
Protein Sequence: MSLAEEEEDTIIGTNTCGDCGQQFKTKLTLRKHIKECHSNYVCRECGAKFTCIRYLARHESRHTAKATIPCNLCDKLFINNSEMREHQKSHKIGEPITCTLCGYVTLYKSNLSRHLKRHNKDYTVYCEQCGDGCYNKDELYSHQIKKHGAIPYYCTVCTKTFTSRGCLNEHNKTTHCTTTKDFLCKTCGKAFKTKTATKRHMKVHLGLKFRCNLCNKAVNSAYSLKKHLKAHSESSNSRNVAEKNMEKSTEKNEKAKKSKEYLCNECGKKFNDKEKYCRHIDTHVKVYNCSECTYKSKYATNFKIHMMKHRGEYLIKCKVCKKGYYNMQYYRDHFRLKHSNEISTFKCHECDHIYRSKVRLKQHLRYHTTHLNGQKYQCEICGKLCLSYKGMKTHRLTIHEDSRHTCDICNKIVTSLQSLKYHKMRHKREKTHVCDICGKGFIGQSNLLVHKRIHTGERPYKCNLCDRSFTQKITLIVHKRQHNDERPFQCMFCDKRYVCKTNLNRHKKTHRS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -