Trub008277.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Triatoma rubrofasciata
Gene Symbol
ZNF219
Assembly
None
Location
chr8:3302796-3314649[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 19 3.7 2.2e+02 2.1 0.1 15 23 68 76 64 76 0.91
2 19 0.0001 0.0063 16.4 7.5 1 23 82 104 82 104 0.99
3 19 1.3e-06 7.8e-05 22.4 2.4 1 23 110 132 110 132 0.99
4 19 1.8e-06 0.00011 22.0 2.0 1 23 138 160 138 160 0.99
5 19 0.00072 0.044 13.8 3.5 1 23 166 188 166 188 0.99
6 19 1.5e-05 0.00093 19.0 4.1 2 23 195 216 194 216 0.97
7 19 1.6e-07 9.9e-06 25.2 3.5 1 23 222 244 222 244 0.99
8 19 5.6e-06 0.00034 20.4 2.0 1 23 250 272 250 272 0.99
9 19 0.13 7.8 6.7 1.2 1 17 278 294 278 295 0.93
10 19 7.6e-06 0.00046 20.0 3.9 1 23 339 361 339 361 0.99
11 19 5e-06 0.0003 20.6 0.7 1 23 367 389 367 389 0.99
12 19 8.2e-07 5e-05 23.0 2.8 1 23 423 445 423 445 0.99
13 19 7.8e-06 0.00048 20.0 1.8 1 23 451 473 451 473 0.99
14 19 4e-06 0.00024 20.9 0.5 1 23 479 501 479 501 0.99
15 19 3.5e-09 2.1e-07 30.5 1.3 1 23 507 529 507 529 0.99
16 19 3.6e-06 0.00022 21.0 4.0 1 23 535 557 535 557 0.99
17 19 0.001 0.061 13.3 4.4 1 23 563 585 563 585 0.99
18 19 6.5e-05 0.0039 17.1 3.6 1 23 591 613 591 613 0.98
19 19 0.00045 0.028 14.4 2.0 1 23 619 641 619 641 0.96

Sequence Information

Coding Sequence
ATGAAATTTCCAATTTCCCATGCTGTGGATATACCTTCATCCAATCGCAGTTTGCGAGTCAGTTGTCTTATTACTGCTGTACGGGATACTTGTATATGCGCACCACTGTTCCTCTCCTTCTCCATTTATACACTTTCAACTGGAAGTTACTTGCCTCCACCGATTGCATCTGTTTCACAATCAAGTTGTGCGGCATTCCGAGATTTGAAAGTGCACATTCGTATACATTCAGGCGAAAAACCATATAAATGTAGTCATTGTGATTACACTTGTAAACAACAAGGATCTTTGAGAATTCATTTTCGTAAACATTCTGGCGAAAAGCCCTATAAATGTAAAGAATGTGATTACAGTTGTCCAACACCCTCAAGATTGAAAGTACATATGCAAACACATTCAGATGAGAGACCATATAAGTGTAATGAATGCGATTACAGCTGTGGATCGTCATCAAGTTTGAGAATACATATACAAACACATTCTGGCAAGAAGCCATTTAAATGTGATGAATGTCACTACAGTTGTGCGACATTTGGGGTTTTGAAAATACATGTTCGGACTCATTGGGGCGTGAAGCCACTTAAATGTAGTCAGTGTGATTACACATGTGCACATTCCGGATCTTTGAAAATACATATGCGAACACATACAGGTGAGAAGCCATATAAGTGTAATGAATGTAATTATAGTTTCACAAAATCTTCAAGATTGAAGGAACATATGCGAACACATACAGGCGAGAAACCGTATAAATGTAATAACTGTGATTATAGTTGCGCAAGAGCCTCAAGATTAAAAGAACATATTCGAATACATACAGGCGAAGAGCCTTATATTTGTACTGAATGTGATTTCAGTTGTGCAACATACTCAAAATTGAAAATTTGTCACATCTTAGAAGATACTGATTCACAAGAAGGGAAATCATATAGGGAAGAAATACATACTTATCCTAAACTTCCTGAGGAACAAGAATTGGAAGTAACTGCAGCCACACTTACTGAAAATAAACAGTTTAAATGCAGAGTTTGTGATTGTAGTTTTACATCAGCGACGCGTTTGAAAATACATATGCGAACACATTCAGGCTATAAGCGATATAAATGTAAAGAATGTGATTACAGTGCTGCAACATTCGCATATTTGAAAGTACATATGAGAACACATTCAAGAGAGAAGCCACATCAAGGTAATGAAAGTGATAATAATAGTGCGACATTCGGTTGTTTGAATATGCTAATGCGAACACATTCAGGCGAGAAGCCGTATAAGTGTAATGAATGTGATTACAGTTGTTCAACACTCGCATATCTGAAAGTACATATGCGATCACATTCAGGAGAAAAGCCATTTAAGTGTAATTTATGTGATTATATTTGTGCAACATTAGCATATTTGAAAATACATATGCGTACACATTCAGGCGAGAAGCCATATAAGTGTAATGAATGTGATTACAGTTCCACATCAGCCTCGGCGTTGAAAGTACATTTTCGTATACATTCAGGGGAGAAACCATACAAATGTAACGAATGTGATTACAGTTTTACCTCATCCTCAGGATTGAAAGTACATATGCGAACACATTCAGGCGAGAAGCCATATAAGTGTACTGAATGCGATTACAGTTGTCCAAGATCCTCAAGATTGAAAGAACATATGCGAAAACATTCAGGTGAGAAGCCATTTAAGTGTAATGAATGTGATTTCAGTTGTGCAACATCCCAAAGATTCAAAGAACATCTGCGATCACATTCTGGCGAGAAGCCATATAAGTGTAGTGAATGTGAATATACTTGTACAACCTATTCAGGATTGAAAATACATAGGCGATTACATTCAGGCGAGAAGTTGTATTTGTGTAATGAATGTGATTACAATTGTAGAACTCTCCCAAGATTGAGTGTACATATGCGAACACATTCTGGCTAG
Protein Sequence
MKFPISHAVDIPSSNRSLRVSCLITAVRDTCICAPLFLSFSIYTLSTGSYLPPPIASVSQSSCAAFRDLKVHIRIHSGEKPYKCSHCDYTCKQQGSLRIHFRKHSGEKPYKCKECDYSCPTPSRLKVHMQTHSDERPYKCNECDYSCGSSSSLRIHIQTHSGKKPFKCDECHYSCATFGVLKIHVRTHWGVKPLKCSQCDYTCAHSGSLKIHMRTHTGEKPYKCNECNYSFTKSSRLKEHMRTHTGEKPYKCNNCDYSCARASRLKEHIRIHTGEEPYICTECDFSCATYSKLKICHILEDTDSQEGKSYREEIHTYPKLPEEQELEVTAATLTENKQFKCRVCDCSFTSATRLKIHMRTHSGYKRYKCKECDYSAATFAYLKVHMRTHSREKPHQGNESDNNSATFGCLNMLMRTHSGEKPYKCNECDYSCSTLAYLKVHMRSHSGEKPFKCNLCDYICATLAYLKIHMRTHSGEKPYKCNECDYSSTSASALKVHFRIHSGEKPYKCNECDYSFTSSSGLKVHMRTHSGEKPYKCTECDYSCPRSSRLKEHMRKHSGEKPFKCNECDFSCATSQRFKEHLRSHSGEKPYKCSECEYTCTTYSGLKIHRRLHSGEKLYLCNECDYNCRTLPRLSVHMRTHSG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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