Trub004266.1
Basic Information
- Insect
- Triatoma rubrofasciata
- Gene Symbol
- SCRT1
- Assembly
- None
- Location
- chr1:83627996-83631139[+]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 7.3e-05 0.13 11.8 0.7 14 38 126 147 120 152 0.87 2 5 0.0056 10 5.8 0.8 18 28 161 171 151 186 0.71 3 5 0.063 1.1e+02 2.4 0.2 18 28 187 197 178 208 0.82 4 5 5.9e-05 0.11 12.1 0.4 19 41 216 235 203 238 0.88 5 5 0.0093 17 5.1 8.0 2 43 228 265 227 266 0.87
Sequence Information
- Coding Sequence
- ATGACGTACACCAGCACGGGTGCAGCATTATCATTGCCGCCAAAAAAGAAGGATATCTATCGACCGTATTCATTGGACGATCGACCTACACAAACTACACCAACGGTAGCGCCTACTACACCTACAACCGTGATTACCGCTTCAACTTTTCGCGAAGAAGATATATCTGCGGCTCATGCAATACTTGACCTGAGTGCCTCCACCCCACCATTACCTCCCAATCATCATCACCACCACCATCATACTCAACTTAATACGGATAATGACGGTCCAGAGAAATCAATACCAACCAAGACGGTAGCCTATACATACGAGGCGTTCTTTGTCAGCGACGGCCGTTCAAAAAGGAAAACCACTGAAGTTCAACCGGATATAAAACAGAGATACACATGTTCAGAATGTGGTAAACAATACGCAACATCATCCAATCTGTCCAGGCATAAACAAACCCATAGGAGTTTAGATTCGCAATCTGCTAAAAAGTGCAACACATGCGGGAAAGCTTATGTCAGTATGCCAGCGCTGGCTATGCACTTGTTGACGCATAAATTGAGCCATGCTTGTGGTGTTTGCGGAAAACTGTTTTCAAGGCCTTGGCTGTTACAAGGTCATTTAAGATCACATACTGGGGAAAAACCATACGGATGTGCACATTGTGGTAAAGCGTTTGCAGATCGTTCAAATCTACGTGCACATATGCAAACACATTCGGCTGATAAAAATCATCAATGCAACAGATGTCATAAAACTTTTGCATTGAAATCCTATTTAAATAAACATCTTGAATCCGCATGTCTTGCTGAACCAACAGTTGGTGAACTTGTGGCGCCTGTTTCATAA
- Protein Sequence
- MTYTSTGAALSLPPKKKDIYRPYSLDDRPTQTTPTVAPTTPTTVITASTFREEDISAAHAILDLSASTPPLPPNHHHHHHHTQLNTDNDGPEKSIPTKTVAYTYEAFFVSDGRSKRKTTEVQPDIKQRYTCSECGKQYATSSNLSRHKQTHRSLDSQSAKKCNTCGKAYVSMPALAMHLLTHKLSHACGVCGKLFSRPWLLQGHLRSHTGEKPYGCAHCGKAFADRSNLRAHMQTHSADKNHQCNRCHKTFALKSYLNKHLESACLAEPTVGELVAPVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01479646;
- 90% Identity
- iTF_01479646;
- 80% Identity
- iTF_01479646;