Trub005315.1
Basic Information
- Insect
- Triatoma rubrofasciata
- Gene Symbol
- bab1
- Assembly
- None
- Location
- chr1:77788161-77800742[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.6e-17 1.2e-13 50.0 0.0 1 43 55 98 55 100 0.95 2 2 2.2 3.5e+03 -2.7 0.1 7 15 161 169 160 170 0.86
Sequence Information
- Coding Sequence
- ATGTTGGAGTCATCGCATGCATGGCTTGGTGCATCGACGTCTTCACTGGCGGCAGACAGTTACCAGTACCAGTTGCAGTCGATGTGGCAAAAATGTTGGAATACCAACCAAAGTTTAGTACATAATTTAAGGTTTAGAGAGCGAGGGCCTTTGAAATCCTGGCGACCTGAAACAATGGCTGAAGCGATATTATCAGTTTTAAAAGAAGGATTGTCGTTATCACAAGCGGCCAGGAAATATGACATACCATATCCAACTTTTGTACTGTACGCCAACCGGGTGCACAATATGTTGGGACCTTCGGCTGATGGAGGTTCTGACTTAAGGCCTAAAGGAAGAGGACGACCGCAGAGGATTCTTTTAGGTATTTGGCCTGAAGAACATATTAGAGGCGTAATACGAGCGGTAGTATTTAGAGATCCGCAACATATTAAAGAAGAACCTACGCTGAATTTAGCCTATCATCGAATTCCCGTAACTGCTGCAGCAGCTCATTGTGCCAATGGAACTAATCTTCACCCCTCACTGTTGCATTCACCTAGCCCAGTAGATAGTTCTCCCCGTTCGTCTCCACTTACTCAGCCCAACAATAACATGGAGATGGGCTTGAACTTGGGATTCAAACCTATGGTAAATGATACCTTACAAAGTCAAAGAAATGAACACTTATTCCAAGATGAAATAGAAGACCTCGTAAAAAGGCCTCAACCTAGTGATACTCCTAAAATTAAGTCTACTAGTATGTCCTATCAGGCGACACCAAACGACCTGTCAATGAGGGCCGATCATCTCTTCCAAGATGAGATGGAAAGTATTATGAAAAGAAGTTCTGTATCAGAGCCACCTAAAGTGAAGGTTGGGATAGGTGTGAGCGGTATGCCTTATAAAACCACTTGTGAAGGTTACATGACATCGACAAGACCTGAATCGTTATTCCAAGAAGATATAGAAGATCTAGTAAAAAGTCCACCACCGCAAAGTAATAAAAAGGAACCAATACATTTATCAACCGCTGTTGACCAGAGGTCCGACTAG
- Protein Sequence
- MLESSHAWLGASTSSLAADSYQYQLQSMWQKCWNTNQSLVHNLRFRERGPLKSWRPETMAEAILSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGSDLRPKGRGRPQRILLGIWPEEHIRGVIRAVVFRDPQHIKEEPTLNLAYHRIPVTAAAAHCANGTNLHPSLLHSPSPVDSSPRSSPLTQPNNNMEMGLNLGFKPMVNDTLQSQRNEHLFQDEIEDLVKRPQPSDTPKIKSTSMSYQATPNDLSMRADHLFQDEMESIMKRSSVSEPPKVKVGIGVSGMPYKTTCEGYMTSTRPESLFQEDIEDLVKSPPPQSNKKEPIHLSTAVDQRSD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -