Trub009942.1
Basic Information
- Insect
- Triatoma rubrofasciata
- Gene Symbol
- br
- Assembly
- None
- Location
- chr9:2737346-2745263[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.3e-08 3.7e-05 22.9 0.0 14 38 212 237 201 240 0.86 2 3 8.2e-14 1.3e-10 40.3 0.0 6 41 255 289 250 292 0.90 3 3 7e-09 1.1e-05 24.5 0.1 4 38 354 388 353 390 0.92
Sequence Information
- Coding Sequence
- ATGTTGATTTTAAAAGATGGGTTTCAATGGGGCAGGTTTAGTTGTGATCATTTGGTGCCTTTCAATTTAAGGATGGAAGCTGCGGAAAAATATTGTATGAAATGGAGTAGTTATCAAAAACATATTGGATCTTTTTTATCTGAACTCTGCGAATCTGAAGTTTTAGCAGATGTTACCATTTGGGCGGAAAATCAGAAATTTAATTGCCACAGAGTTATTCTCTCAGCCTGTAGTCCATATTTTCAGGAAATTCTATCTAATACATTATGCAAACATCCAGTTATAATATTAGCCGGTATTCACGCGGAAGATATCAAAACCATAATTTATTTCATTTACCATGGGGAATTAGACAATATAACATACGATAGATTTATTTCAGTTTTAAAAACTGCCGAGATGCTTAAGATTTGTGGATTGACTGAGGTAATCGACCATATACCTCCGAGAAAGTGTTTAGAAGATTTAGAAGAGATAATAATGATGAACGAGGGAGAAAATGAATCCACCCAACCAATGCAAGAAGTAGGAATTTCCAAATCTTCTGAGGAAACTATTGAGAAAAACCAAAAACCAAAGAAACATCAAAGGAAATACAGCGAGGGCAGTCTTGGCTGGGCATTAAGCGATATGGAAAAAGGTATGTCATTAGTTGAAGCTGCAAGGTTACATAAAATACCAAGATCTACTTTATATGCTAAAGCCAAGCAACATTCTGGATTAAGAATTGCAAGCAGAAAAGAGCATACAAATCAAGATTGTCAGGCTGCTGTACAAGCTGTCGCAGGTGGTCTTAGTTTGAAAAGGGCAGCAGAACAGTATGGAATCCCAAAGACAGTTCTTTGGAGGAGAGTACAAAAACGGCTTGATATATCTTCTAATTTGAAATCTAGGAGGAAGAAACAAGAGCGCATCCTAAAATTAGAAGATGATAAAACCTGTATTTTGCAAGATGGAAAATTAATTGCCCAAAACAGAATCATTGGATCATCAATACGTGCAAACAGAATGAAAACAGTCGAAATGCATGATTTGAATACAAAGGATAGTAAACAGTACAGATTGGCTCAAGCGTTGAATGCCTGTAAAGAGGGTAAAATGTCTCAGGCTGTTGCATCTAGAACTTACCAGGTGCCAAAAACTTTAATATGGAGGCAATTACAAAAAGCGTGGTTAATAAATCAGAATGAAAGCGGAAATAAATCTGTAGAATCATCAGATAGTAATAAAACACCATGTGACGTAGAACCTTCAAAAAAGAACGATATAAAGTATATAGGTGTACTTTCCAATGTTGGCAATTATAACAATGAAGAAGATAAAAGTGATGATCATAAGTATGGAGGGAGCGTTAAGGAAGAACCATTCACTGAAGCGCCTCTGATTATCTTAACCTCAACAAATGATGTGCTACCAAAGGAAGAAATAGTGAACGATGATGAACTAATTGAGTCATTGAATGTACGCATTGAAAATGTCGTCGAGGTTGTATCTGATAAAGATGATATACATTGGCGATTAGAAACTTAA
- Protein Sequence
- MLILKDGFQWGRFSCDHLVPFNLRMEAAEKYCMKWSSYQKHIGSFLSELCESEVLADVTIWAENQKFNCHRVILSACSPYFQEILSNTLCKHPVIILAGIHAEDIKTIIYFIYHGELDNITYDRFISVLKTAEMLKICGLTEVIDHIPPRKCLEDLEEIIMMNEGENESTQPMQEVGISKSSEETIEKNQKPKKHQRKYSEGSLGWALSDMEKGMSLVEAARLHKIPRSTLYAKAKQHSGLRIASRKEHTNQDCQAAVQAVAGGLSLKRAAEQYGIPKTVLWRRVQKRLDISSNLKSRRKKQERILKLEDDKTCILQDGKLIAQNRIIGSSIRANRMKTVEMHDLNTKDSKQYRLAQALNACKEGKMSQAVASRTYQVPKTLIWRQLQKAWLINQNESGNKSVESSDSNKTPCDVEPSKKNDIKYIGVLSNVGNYNNEEDKSDDHKYGGSVKEEPFTEAPLIILTSTNDVLPKEEIVNDDELIESLNVRIENVVEVVSDKDDIHWRLET
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01479541;
- 90% Identity
- iTF_01479541;
- 80% Identity
- iTF_01479541;