Trub011230.1
Basic Information
- Insect
- Triatoma rubrofasciata
- Gene Symbol
- lola
- Assembly
- None
- Location
- chr10:25757257-25797696[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 2.8e-12 4.3e-09 35.4 0.0 1 39 561 600 561 604 0.90 2 4 5.9e-13 9.3e-10 37.6 0.1 2 39 616 653 615 656 0.92 3 4 6.2e-17 9.8e-14 50.3 0.0 2 45 671 715 670 715 0.98 4 4 1.7e-17 2.7e-14 52.1 0.0 1 42 722 764 722 765 0.96
Sequence Information
- Coding Sequence
- ATGAGCGAGCACTTCTGCCTGAAATGGAACAACCACCAAACAACATTAGTATCTGTATTTGATAAATTATTGGAATGCGAGTCTTTGGTAGACTGCACACTTGCCGCCGATGGGAGATATATGAAAGCTCACAAAGTTGTACTCTCAGCATGCAGCTCATATTTAGAAGAAATTTTAAGGAATCATGAAGATAAGCATCCAATATTAATATTCAATGATATAAGTTACAGTGAGTTAAAAGCAATGTTGGAATATATGTATCGAGGCGAGGTTAATGTTTCTCAGGAACAATTAAATACATTCCTGAAAGCGGCAGAAGCCCTAAAAATTAAGGGTTTAACAGATCAAGGTGGGGGCGGCGGCACCAGCGATGGGGGAGGACAGGACAATCTTAAACGAAAAATGGGAGCGGCACAAAGTAGAAAAACGCAAAGTCCTGTATTGGGAATGACACCAGTAGAAAGGCCAACCTCACCAAAACGTAGAAAACCCGCACGACGTCAGTCTAGGGATGAAAATTTTCCAGGTGATTCAAATTCATGCGATACTGCTCCCACGCCGCCCCCATCCCAGCCTCAGCAGGTCAATTCAATAGCCGCGAGGATAGAAGAAAAAGTTGCAAAAATTAAGAAAGAATCCGGGTCTACCCCATCGGGTGCTGAACCACCCGGAGGTACATCTGCGCTTTCGGCGCTTGGAATGCTCCAACCAAAGACTGAGTTTCTTGAAGAATCTGGAAATGTGGAAGATTTGACTTTGGAAGAAGAAGAAGAATATGGACCTAACCCTGGAACTTCACAAGGATCTTTTTCAAGTCAAGACTTCAACAACTGGCAACTAGGAGATCCTACAAGTGATGAGGTCTTTATGGCCTCGCAACACGACCTGAATAATTCGGCTGGCAATTCACAAGAAAGACTGGCGTCCGGTAATAACCAACAGGTACGAGAAGAAGGAACCGTTCCTATGTGTAGGTATTTAAAGAGGTGGGAAGCTACTGTTGGTTTTCAGGGAAACATGTTCGTGGATACAATTGAGTTGAACATTCCTGCAGATGCCAGAGTCATTAAAAGAACACAAGCTTTTGTTGATGTTACTCTTGCATGCAATGATCAGTCTCTCAAAGCGCACAAGGTTGTCCTATCTGCGTGTTCTTCCTATTTCCAAAAACTTCTACTAGAAAACCCATGTAAACATCCCACCATCATTATGCCACAAGATGTTTGCTTCACTGATCTCAAGTTCATCATAGAATTTGTCTACAAAGGAGAAATTGATGTTTCGCAAGCTGAATTGCAGTCCTTGCTGAAGACAGCTGACCAGTTGAAGATTAAGGGATTATGCGAGGTGGAAGATGGTAAGGAAGGTGCTGAAGTTACACCACTTCCACCGATGCCAAGGAGACGCATCTCCCATAGGCAACAAAGACTGGCAGCGAAGAGACACTTATATAGACAGAGGTTGCAGAGTGATGCTCAGTTTGATATTTATCTGTATCAGACGGTGCAGACTGTTGACGAGGAGGACGATCCAGCCATGCACACGATGATGATTACACCAGAACTCTTAGGGCTCATTCCTTCATCACAATCAGATTGTAGTGATGTTTGTTCCACATCTACAGTGAAAAGTAATTATTCCACCATTTGTACGGGACTAAATGGTACAAACAAATCGTGGACACAAGAAGATATGGATCAAGCTTTGCAAGCACTTAGACATCAAACTATGTCATTGAGTAAAGCCAGTGCCACTTATGGTATACCCTCTACAACTTTGTGGCAACGGGCCCACCGACTTGGTATTGACACGCCCAAGAAAGAAGGACAAACCAAGTCATGGACTGAACATAGTCTTAATACAGCACTTGAAGCTTTAAGAACTGGTCAAATTTCTGCAAATAAGGCTAGCAAAGCTTATGGCATTCCCAGTAGTACACTATATAAAATTGCAAGACGGGAAGGTATTCGTCTTGCGGCACCGTTCAATGCAGCACCAACTGCTTGGGTCCCAGAAGATCTTGAAAGAGCTTTAGATGCTATTCGTTCTGGACAGTGTACGGTGCAAAGAGCGGCCGCTGAATATGGAATACCATCAGGCACATTGTATGGCAGATGTAAAAGAGAAGGTATCGAATTATCCAGAAATAATCCCACACCTTGGTCTGAAGAGGCGATGATGGACGCTCTGGAAGCAGTCAGAATTGGCCAGATGAGTATAAATCAAGCGGCAATTCATTTTAATCTTCCATATTCGTCGCTTTATGGTCGTTTTAAACGAGGTAAGTATGAAAGCATAAGTGGTAATCAAGATGTTACGGGCACACCTCAGCAGCAACCGCAACAAGAGCAAGCTCGGACAACTGCACAACAGACACCACCGCCACCTCCACCGTCTGCTGCTACAGCAACACAGGAAATTGAACAGAATGATCTGGCAAATCAACAACAGCAACAACAACCACCCCAACCACAACAGCAACATAGTCCAACAAATACAGCTCAACAACAACAAACCGCAGATTATGTTAGTACAGTATCAACAGCCATTGCACGTTTATCAGCCAGCAACGGCTACATGAGTGTTACACCCAGCCGCTACGCATCTATATATTTCTTAAAGTTTACACTCATGGCAAATATGCGGGTGGCACTAGCGTGTCACTGGCGCAATAAAAATGCATTCGTGTTGGTGTGCAATGTTGTCGTTTGTGTCGCAATATGA
- Protein Sequence
- MSEHFCLKWNNHQTTLVSVFDKLLECESLVDCTLAADGRYMKAHKVVLSACSSYLEEILRNHEDKHPILIFNDISYSELKAMLEYMYRGEVNVSQEQLNTFLKAAEALKIKGLTDQGGGGGTSDGGGQDNLKRKMGAAQSRKTQSPVLGMTPVERPTSPKRRKPARRQSRDENFPGDSNSCDTAPTPPPSQPQQVNSIAARIEEKVAKIKKESGSTPSGAEPPGGTSALSALGMLQPKTEFLEESGNVEDLTLEEEEEYGPNPGTSQGSFSSQDFNNWQLGDPTSDEVFMASQHDLNNSAGNSQERLASGNNQQVREEGTVPMCRYLKRWEATVGFQGNMFVDTIELNIPADARVIKRTQAFVDVTLACNDQSLKAHKVVLSACSSYFQKLLLENPCKHPTIIMPQDVCFTDLKFIIEFVYKGEIDVSQAELQSLLKTADQLKIKGLCEVEDGKEGAEVTPLPPMPRRRISHRQQRLAAKRHLYRQRLQSDAQFDIYLYQTVQTVDEEDDPAMHTMMITPELLGLIPSSQSDCSDVCSTSTVKSNYSTICTGLNGTNKSWTQEDMDQALQALRHQTMSLSKASATYGIPSTTLWQRAHRLGIDTPKKEGQTKSWTEHSLNTALEALRTGQISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTAWVPEDLERALDAIRSGQCTVQRAAAEYGIPSGTLYGRCKREGIELSRNNPTPWSEEAMMDALEAVRIGQMSINQAAIHFNLPYSSLYGRFKRGKYESISGNQDVTGTPQQQPQQEQARTTAQQTPPPPPPSAATATQEIEQNDLANQQQQQQPPQPQQQHSPTNTAQQQQTADYVSTVSTAIARLSASNGYMSVTPSRYASIYFLKFTLMANMRVALACHWRNKNAFVLVCNVVVCVAI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01479495;
- 90% Identity
- iTF_01479495;
- 80% Identity
- iTF_01479495;