Basic Information

Gene Symbol
kdm5bb
Assembly
None
Location
chr2:61401238-61405665[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 7.4e-23 1e-19 70.2 0.0 4 88 98 177 96 178 0.94
2 2 0.16 2.2e+02 1.8 0.0 22 44 918 939 902 982 0.64

Sequence Information

Coding Sequence
ATGGAATCACGCCCAAAAGAACCAGTCAAAACCACACCTCGAAAAGGGAAGCCAAGGTTTGTCTTTCAGCCGCCTCCTGAAGCACCAGTTTTCAGGCCTACAATTGAAGAATTTGAAAATCCTTTACATTACATAAATAGTATTAAGCCCCTTGCCGAAAAATGTGGTATTTGTAAAATCATTCCTCCTAATGGGTGGAAATCACCCTTTGTGCTTGATATGGATAAATTGAAATTCACACCTAGAATTCAGAGAATTAACGAACTTGAAGCCAGAACTCGTATAAAGTTATATTTTATTGACCAATTAACAAAATTTTTTGCCAATAAAGGTATAACATTTCAAATCCCTTTGATTGAAAAAACACCTCTTGATTTATATACCCTCCACAGGTGTGTCAGAGACCAAGGAGGTGTTGAAAATGTAAATAAAGAAAGAAAATGGAATGATATTGCTATAAAAATGGGTTTTAATGGGAAAGGTGCCCCAACTTCATTGAAATTACATTATGAGCACTTGCTACAACCGTTTCTCATTTCTCAACAAGAAAAAAATGAAAAACCTAATAATTCCACAAATCATTCTTATTTCGATGAGAAAAGTGAAATGCATGTTGACCGAGAAGGTGGAGATAACGGAACAGGGCTTCACTTAAGTAAACAGTTGTGTCTTTTGGATGACTCTGATGATAGTAAAGGGTCAGCTTTAAGAGAATTAAAAAGTTTAAAATTTTTAGGTCCTGGTCCCAAAATGGCAGTTTTTGATGGGCCTGTGAAAACAATGAAAACAAGAACTAGAGGGAAAAAAATTCTTTACGAATTCGACCCTTTAGCTAAATATATGTGTAAGAGTTGTTGTAATGGCGATATAGAAGAATCATTAGTTACTTGTGTTTCTTGTGAAGATCGTTACCATGCTAAGTGTCTTTTCCCACCATTATTAGAAAAACCTATTGGTGATTGGAAATGCCCCAAATGTGTAGCTATTGATGTTTGTAAACCTTTGGAAGAATTTGGATTTGCTCAAGCTGAAAAAGAGTATACTCTCACTGAATTTAGGGAAATGGCTCATAGATTCAAACGTAAATACTTCAAGGCGAATCCTACTCAAGTTCCTACGCAGAAAGTTGAAGATGAATTTTGGCGAGTTGTGTCATCAATAGAAGAAGCAGTAACTGTGGAATACGGTGCAGATTTACACGTTATAGACCATGGTTCAGGATTCCCAGTTAATGGTAAAACTTCAAATATTAAAGGTATTGACAAGGAAACATATAATAAATATGCAGAATCTTCTTGGAATCTCAATAATTTGCCGGTGTTGAAAGCATCTGTCTTAAGACATATTAGTGCTGATATATCAGGCATGAAAATACCATGGATGTATGCTGGTATGTGTTTTGCCACCTTTTGTTGGCATAATGAAGATCACTGGAGTTATTCTATTAATTATTTACATTTAGGTGAACCAAAAACTTGGTATGGAGTTTCTGGAAACATGGCTGAAGAATTTGAGGAAGCAATGAAAGCTGCTGCCCCAGAATTGTTCGAGTCGCAGCCAGATATATTACATCAACTTGTAACAATAATGAATCCAAATGACATCATGGCAGCTGGTGTGCCAGTTTATCGAACAGATCAGAAAGAAGGTGAATTTGTTATTACATTTCCGAGAGCTTATCATGCAGGATTTAATCAAGGCTTTAATTTTGCAGAGGCCTGTAACTTTGCTCCTTATGATTGGTTAGCTATAGGAAGAGAATGTGTTACTCATTATTCTTCTCTTGGCAGGCCTTGTGTCTTCTCTCACGATGAATTAGTTTGTAAAATGGCATTAATGGCAGATGAATTGGACGGCAATATAGCATGGGCAACAGTAAATGATGGGAAAGCTATGCTGAATGCTGAAAGGAAACGAAGGCAAATTATTACAAAGCAGGGTGTGTACAAAGCTGTAAAGACAAAATTTGAAGACCTTCCTGATGATGAGAGACAGTGTGCAGTTTGTAATACCACCTGTTTTTTGTCAGGTGTGACTTGTCCTTGTGATGAAAGTAGACTTGTGTGTTTAGAACATGTAAGTGACTTGTGTGGGTGTCCTTATAGTGTTTACATAATGAAATATGAATACCAGATAGATGAAATAGCAAATATGCTAATGGTGTTAGAGAATAAGACGTTGAAATTCAATATATGGTTAGCTCGTGTAGAAGAAGCACTCTCAGGTAGTAAAAAACCAAAGATATCACTTTGTGAATTAACAGAATTGTTAATAGAAGCAAATGACAAAGAATTTCCCAGAAATGATCTGATTTCAATACTTCATTATCAAGTTAGCAAATGTATTGAAGTGTCTGCCTTAGCTCGAACCATCTTAAGTAATGCTAGGAAAAAAAATGAAGCAAGACGAATCACTGTAGAAGAATTGTCAATGTTTGCCAAAGAGATTGATAATTTACCATGTGCCCTAATGGAGACTACTGAAATTAAGCAATTATTAAATAGAGCAAAACATATACAGCGCATTGCAAACAAAAACCTTGCTGTGAGAAGTATTAAAACTTCTAAACTTGATGTTTGTCTTAAGTGGATGAAGTCTATCAATTTAGAATTTAAGGAATTACCATTGTTACAAGAAAGGCTAAAAGAAAAAGAGTGGCTAGAAAAAACTGATGCCCTTTTGTCGAGAAATGGGTCGGTTGAAATTGGTGTACTAGAAAACCTAATTAAGTTATCGGACTCTCTTCCACATTCACAACCTTTTGAGAGAAAAAAGGTGGCACTTTTAAAATTGAAAGAAACAGTGATTGAGCAGGAGAAAGTAATAGATTTAGAGGCTGAACATATATCGGATCCTCTTCACATATCAAATAATGCTCCTTCGCAGGTTGTAAGTGAATTAGATTTGGCAAAACAATGGCAAGAGAAAACGTCGTCAGTATTGAAGGGCGAAAGTGTTCTTACAACTTCTGCTTTAGCGGATCTGATTTTTCGAGGTCATACCTTCCCGTTTAAAGTTACAGGTATTGAAGAGCTTGAAGATAATTTTAAGAAAGTACAGTCTTGGAAGTCGTTAGCAGCTAGATCCATTTTAAAGAGGAAAAGTCCGTACACCTTATTACAAGCTCTGTGGCCTAGGAAATTTGTATCTCGAGATAATTATTTTAAGAAAAAAGATATAGTTTTGTTGGAGAATATGATAAACGATGGGGAACGAAATTTCACAAGAGTCCATTATAAATCCGCATCCAGTAGTCAAACAAAGTCATTATTTAAACTTAGATTGGATAATTTAGCTCAGAGAGCAAATTCAGAATTCGTTGGAATTCTTTGTATGTGTGGGCAAATTATTGCTGGTGAAATTATAATATGTGAGTTGTGCCAAAGTGCATATCACAATTCTTGTTTTAGGGTGGATGAAAATGTTGTGAAGTCGTATATTTATGGGTTTAGGGCCAAAGTTATATGTTCTTTATGTACTAGGACTAAACGACCCTCCTTGGTGGAATTAAATAATCTACTTTCTTCAGCCGAAAAGTTGAAAATTAAAATTCCAGAATATTTTGTATTGAGATATTTTGTTAGTAAAGTTAAGAGGTGGCAAAGAGAAGCAAGAATTGCCCTAAGTACGCTGGAAATGATGGTTTCTTTAAATTCAATTATTACTGCAATGAAGAAAAAGTGTACGCATGAAATGAAAAAAGTGGGAAAACCAAGTAATCTAATTGCTCGTTCGTTTGATAATCTTAATAAATTAGAAACTTCACAAGTAGAGTCTCCATCAAAAAACAATTCAGTTATTGAAATTAATAGAGAATCCCTTCTAAATTTGCGTCAGATTATGATGATGGGTGATTCCTATGAGGTAACAACTGCGGAGAGTTCTCAGTTATGGATACTTATTGATGCCTCCAAATCAGGCATCCTTCCAGATACTTGTCCCACCTCAATGGGTAATCTTAAAGTTTACGTAGTTGATCGAAATATTAATACTGAAAGCAAATTAGATGGTGTTAAAAAAATACCAATGAAGCAGAAACAAAAAATGAAGAATTCTCTCGTATTATCAAAAATTAAAATTAGAAAACAAAATCCTAGTCCCCTTCCTCAGATAGCTAATAAAGTTCGGAGAGCGGCGAAGAGAAAAAACACCGTAAAAAAGGGCATGTCCAGGGATATCAAACTTCATGGTATCACAGTGGAAGAGCATGAACCTGGTGAAGCATGTGCATCCGGTGGGAATTGTGTGCTACCAACTGATGAGTCTGTAGACTGGGTGCAGTGTGATGGAAGATGTGGCAAATGGTTCCATATGAAATGTGTCGACCTGACCAATGTTACTGAAGAGGATGTCTTTGTCTGTAAACTTTGTGAGGCTGATATTGTTCAACACATTAGTCCAAATAACGAAGCAGACCCATTATCCTAA
Protein Sequence
MESRPKEPVKTTPRKGKPRFVFQPPPEAPVFRPTIEEFENPLHYINSIKPLAEKCGICKIIPPNGWKSPFVLDMDKLKFTPRIQRINELEARTRIKLYFIDQLTKFFANKGITFQIPLIEKTPLDLYTLHRCVRDQGGVENVNKERKWNDIAIKMGFNGKGAPTSLKLHYEHLLQPFLISQQEKNEKPNNSTNHSYFDEKSEMHVDREGGDNGTGLHLSKQLCLLDDSDDSKGSALRELKSLKFLGPGPKMAVFDGPVKTMKTRTRGKKILYEFDPLAKYMCKSCCNGDIEESLVTCVSCEDRYHAKCLFPPLLEKPIGDWKCPKCVAIDVCKPLEEFGFAQAEKEYTLTEFREMAHRFKRKYFKANPTQVPTQKVEDEFWRVVSSIEEAVTVEYGADLHVIDHGSGFPVNGKTSNIKGIDKETYNKYAESSWNLNNLPVLKASVLRHISADISGMKIPWMYAGMCFATFCWHNEDHWSYSINYLHLGEPKTWYGVSGNMAEEFEEAMKAAAPELFESQPDILHQLVTIMNPNDIMAAGVPVYRTDQKEGEFVITFPRAYHAGFNQGFNFAEACNFAPYDWLAIGRECVTHYSSLGRPCVFSHDELVCKMALMADELDGNIAWATVNDGKAMLNAERKRRQIITKQGVYKAVKTKFEDLPDDERQCAVCNTTCFLSGVTCPCDESRLVCLEHVSDLCGCPYSVYIMKYEYQIDEIANMLMVLENKTLKFNIWLARVEEALSGSKKPKISLCELTELLIEANDKEFPRNDLISILHYQVSKCIEVSALARTILSNARKKNEARRITVEELSMFAKEIDNLPCALMETTEIKQLLNRAKHIQRIANKNLAVRSIKTSKLDVCLKWMKSINLEFKELPLLQERLKEKEWLEKTDALLSRNGSVEIGVLENLIKLSDSLPHSQPFERKKVALLKLKETVIEQEKVIDLEAEHISDPLHISNNAPSQVVSELDLAKQWQEKTSSVLKGESVLTTSALADLIFRGHTFPFKVTGIEELEDNFKKVQSWKSLAARSILKRKSPYTLLQALWPRKFVSRDNYFKKKDIVLLENMINDGERNFTRVHYKSASSSQTKSLFKLRLDNLAQRANSEFVGILCMCGQIIAGEIIICELCQSAYHNSCFRVDENVVKSYIYGFRAKVICSLCTRTKRPSLVELNNLLSSAEKLKIKIPEYFVLRYFVSKVKRWQREARIALSTLEMMVSLNSIITAMKKKCTHEMKKVGKPSNLIARSFDNLNKLETSQVESPSKNNSVIEINRESLLNLRQIMMMGDSYEVTTAESSQLWILIDASKSGILPDTCPTSMGNLKVYVVDRNINTESKLDGVKKIPMKQKQKMKNSLVLSKIKIRKQNPSPLPQIANKVRRAAKRKNTVKKGMSRDIKLHGITVEEHEPGEACASGGNCVLPTDESVDWVQCDGRCGKWFHMKCVDLTNVTEEDVFVCKLCEADIVQHISPNNEADPLS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01478658;
90% Identity
iTF_01478658;
80% Identity
-