Basic Information

Gene Symbol
Arid4b
Assembly
None
Location
chr13:12708422-12745362[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4.5e-25 6.4e-22 77.3 0.1 1 89 296 381 296 381 0.94

Sequence Information

Coding Sequence
ATGGCTGAAGAACCACCCTATTTATCTGTTGATACTGACGTAAGTGCTAAATATAAAGGTGCTTTCTGTGAAGCCAAAATTCGGAAAGTTGTGCGGAGTGTAAAGTGTAAGGTTGTATTCAAACAAGGTTGGGGAAGCGCAACCATTCCAGATGACCAAATTAGAGGAACCTTAAGGATTGGTGCAGTAGTCGAAGCAAAGCATCCGGAAAAGAAGGAATTTGCCGAAGCAACTATTACAAAAATACAAGATTGTAGCCAGTATACCGTCGTCTTCGATGATGGAGATATCACAACATTACGTCGCACGGCACTTTGCTTGAAAAGTGGACGCCATTTTGCCGAAAGTGACACCTTGGATCAATTGCCATTGACACATCCAGAACATTTTAGTAGTCCAGTTATTGGCGGCCGTAGAGGAAGACGCAGGCTGGACGAGAACAGCGAGGATGAAGAGTTACTTCTTATTTCCGGGGCTGAACTGGAAGATGAACGAGAGGAGCATATTGGCCGTGTGGTATGTGTTGAAGGATCTGAGAAGAAGAAACAGAAAGACAATTGGTTTCCAGGATTGGTGGTGGCCCCGACCGCTCAGGATAACGTGCCTATCCATGTCAAGGAGGAGTACTTAGTTAGATCATTCAAAGATGGAAGATATTATACAGTACCGAAAAAAGAGGCCAACGAGTTTACCAGGGAAGTTGGAGCTCGAGTAGAACATCCCACGTTAAAAGCCGCCGTTGATAAGGCATTGCTATATCTCGACTGTAACGAATTGCCACCACACTGGGACCGTGATCTCTTGCTGTACGGACTTGGCGATGTAGCCAGTACGGACAATGATGCTGGACTTGATTATGAGAGTTCGGACGACGAGCCAAGAGAAGAAAAGGACCACTTTGTCGCTCAGTTGTACAAATTTATGGATGATAGTGGTACACCAATAAACAAAGGACCGACTATTGGTTCAAGGGACGTTGACCTATACAAGCTTTTTAAGGTTGTACAAAATCAAGGTGGTTACAATAGAGTTACCAACCATAATAACTGGAAGTTAGTGGCTTTGAAGATGGGCTTTGGCCAAGTTCCAATAACTGTAAATTTAGTTAAAATTGCCTATAAGAAGTTTCTTTTTACCTTCGAAGAATTTTACCGGAAACTTGGTTGTACATTATTGAACCATCCTAGTCGATTGAGTCGAAGTTGTTGCCGTGGAGGCAGGAATCTAATAAGAAACAAGGATTCCGGAAATTCAAGCGGCAGCCTTACAAAGACTGATACAAAAAGACAGGTTAAGGAGGTTAAAAACCAAAGTGACCTGAATGTGCCACCTGTGAAGATCAAAGTGGAAAAGGATGAATATTCCAACCAATCGCAGACTCAGGACGAGGAATTATATGGTGAAATAGCATCAGATGGTGTCTCCAAATCCCCAACACCGCCACCATCAACCACCAGTACCATCACTGCAATATCACAGCGTACAAAACGTAATATCGCCGCTGCTGGAGGCAGCAGTATAACATCATTTCAGTCGCCTACCTTGAAAATACATTTGCCAGTTAAGATTAAATTGGAACAGAATGAAAACAGCCAGCCAACGTCACCAGTTCAGACTTCGCCAACAAGATCTACAACACCGCCACCTCCTCCAGCTCGAACTAGGTCATCTTCACCAACACAGCCGGCCGCCCCACAACAGCAGCAGCACAATTTCTTACAGATCTCTCGACCAATTTCACCAGCCACACCGGCACTTCTGACACAGGCAATTTCCACACCGCAGAACACTTCACCCCAACAGCAGTCACCGAATGCCCACAAAAAGGAGCCGAGAGCTCGTCAGTTGAAGAAAACCACAATTGTGGAAAATATCGCTACTTCATCTTCGAATATCACCAAAGATTTGGACAATATTGCATCAGATTTAGAAAGCAATGTAGAAGTATCGCCAGTGAAAGAGAAAAAACGACGTGCAGCCTTCCCACGTGCAGTAGTTGCGGCGAAAAAAGTAAAACAGTATACACCAAGAATCACCAATCCCCATACACCAGGTCTGGCTGCATCGCGTACAAAACGTGCAGTCAATAAGGATAAGTTAAGAACGATAGTCAAAAATTTAAAAAGCAAATGGGTACCCTCCTCTGTACCAGGTACCAGCAACCAGGAAATCACTAAGGTTACTGTAAAATCAAAAACAACTAAAGAAGACTACATTACTAATATAAAAAATCGTAAAGATGATACCCAACTGCATAGTATTGTTAGTACTGAAGATAAAAAGAAAGGAGGCAGGAAGCGACGCGATAAACGATTATCAGAGGACCACTTTGTACCACTGCCTTACTACAAGACTATTCTGCCTGGTGATAAGCTCCGAGTTTACTATGGTCCAACTCTCGAGTCTAAAGTCACATACGAGGCGAAGGTTCTGAGCATCCGGACGGAAGGCAGTGAATCAGTATATTTGGTACACTACACCGGTTGGAATAACCGTTACGATGAATGGATTAAAACCTCAAGAATAGCCGATAATTTGTCATGGATACCTGGCAGAACGGCAAGAAAAGCCAACCAGACGCCTAAAACTCCAAAACGAAAAGGAAGCCATAAAAATGACACGGGTGGATTTGGTAGTATTAAAGACAGTCAACAGCCCTTAATGACTCCAACTCCCACTTCATCTTCAGCTTCGTCAACCTCATCCAATTCATCAACTACTATGAGCAAAAGTAATATAACATTTTCAATGAGCTCTGGCTGTAGGAAAACGTCCACACGGGCTTCCACAAGAGCGGCGGCCATCAAAAAGGAAATTCCAAGCACAGAATCGAATACTGAATATGACAGTGATACAAATACCGAATCAGAACTGTCTAAGAAATCTTCAATGGACTCAAAACCTAATAATGAATCCGATAAAAAAAGCTTTGGTAAAAAGCGTAAATTTGAGGAAATTTCAAAATCGGATTCAAATCTTCCAATAAAATTGGAAATTGAAGATTCTGATGAGGAATCACTGAACCATTCGAGAAATACTGAACATGTTGACAATGACGAAAATTCCGAAGATCATGTATTGAAAATTTTAAAATCTGATGCCATCAAAAAGGAGGACGTTAGTGAAAATGAATCCTGTATGAATAACGATAATGACGGCGGCAACAATCTGGGAAATGTGATCATTGTTGATGTGGAATTGAAAAATGAATCCGAAGAAGATTCTTTGGTTATCGATGAAAATCAAGAAATTGATGAATCTGAAGTCATCGAAGGTTATAGTAGCGTTGCAGCAACGGATTCAAAACCTGATTCAAAACTACATCCTACAAATCAAACCGGGAGAGATTTTGATCTAACACAGATTAGATCAGAACTGAAAGGAATCGAGACTAATGTAACTCGTCCGGATGACATTGAAGACCTCAATTTAGAGGAATCAAACACCTTAGACATTTACGAGTTTAAGGAGCCAGAGTTTGAAACTACTACGACATGCAAAATGGAGGACAAAAATAAGACTAAAAATAACATCGTTGTCAGAATGTTCAGCGATGTGATAAATAATGTTGCCATTAATCAAAAGGATTCAAAATCAAATGAAAGTAGGATTGATATCGTTGAAGCTAATAATACTACAGCCACCGCCTACAGTGTCCACAATACTTCCGCTGATTCACTGTCCGATGAAAGGCCAATTTTGAAGACTTGTGAGGAGGCTTTCGATCGAGCATGCGCAGAATCGCTTCGAGCGGCTACAGAACATCCACCAGCTGGATTCCTTTTCATGGACGAAGAAGAGGAAGAGGATGTTTATGACGATGATGACAGCCAGGATCGCTTGATAATCTCTGAAAGAGATTCAGACAATGATATCCCAGCGGAAATGTCTATTCATTTACCACCCACTGATTTTAACCAACAGTCCACTTCTATCCAAAAGGAAGTGCTTGAATCTAAGAGCATCACCGCTTTGGACGCTGATTGTGAGAAAGAGGTTATTAGTCGTGGAGATGACGAAGAGGATCTTGAGGACGAATTGTTGAATGTAGCAATTCAACGGGCAATTGAATCATCCGAAGATACAACAGATGGTGAAATCTTGTCCAGACATCTAGCACCAAGGCATATGTTTGCCGCGGACACTTTTAGTCCTGTATTGGACGTGGATAATAACAAAATACAACATGACAACGATACTGACAATATCATAAAGATCAGTATGTTAGCGACTAATCATCATGAATCACCTGCTAGTACGGAGGTTGCTGTTAAGGAGACAAACAGATCAACGGCTAGTGAATCACAGTTGTTGCAGCAGAATTCAGCGTTGGATCTGTCAGGTGCTAGTGAAGAGATACAGACTGATAGTGTAGAACTGTTAACCCAAGACGAAGAGATGATGTGCGAAGATGAAGTGGTCAGCCAAGAAGGTGCTGGTGAACCGGAAACGGTTATCGACACATTAGACATTGAATCCAACGTTGGCGCCGTAGGCGAAGATGAAGATGAAGATGATGATGATTTGATTACAGTAGAAGACTTGGCCTGTTCACAGGGTGACATATCCTGCTCACAGGGTGACTTGGCCGGTGCCGGGTGTGGAAGTAGTAGTAGTAGTGGTGGTGGTGGCGGTGGTGGTGGTAGTGCAAGAGGACCGCACACTCCGCCGGGTCCGGCCCCCGGTACTCCACCCGATACCGAGCTCGATGAGGATTATACAGAACAGTTCAACGCAAATGCCGTCATTGATGACCAATACGAAGAAGTTGCCGATCAGGAGATTGATCGTGATGAACAACCACCGCTATTAACTAGGGAAGTTGAAGTTGAAGACGAAAGTGTTGTCCGCCAAGAACTTGATGAAGAAGAAATTGCATGCAACGATGAGGAAAACGATGACACTAACTTAGTTTCCTTACTGTGTGAAGAAACTATACCGGGAAGTCCACAAGTAGCTGTGAATTCTGATAGTTATCAACTAAGTCCAGGAACTAACGATGAGGAGTCCATAAATGAAGTGACCATATCTAAGGAATTACAAGACAGTATTGTCGACAAAGATATCAAAGAAAAGGATGACCAAGTATTTGTGGCGAATATTGTTGAAAACGTTAACAATCCCGACAATGACCACCAACAGATTGGAGAAACAATAAATAATGCAACAACAAGTAGTTGCAGAAATCTGCAACAAAATGCACAAGTAAATCAAACACCGATACCATCACCGACCAGCTCTTTGTCGTCCAACAATTCACCGAGCAGAGAAGCAATACAGGCATCCCATAATGAAGTCATCCAACCACAGTCTTCTGGAGCTAATGAACAATATCAGGAACTTTGTCCAGCTGTGGTAGCGTCCACGTCTAGTGGAATTACCAAACCAACAGTGAGTGAATCAATCAGAACGCGTAAGAGTGATACCAGAAGTACCAGTGGTAAAAAGAGTCGCCGGACAAGGAAACGATCTGAAGAAGTAGCCAAGAGGAAGTACCGATCAAAGCACCATGCGAGCGACAGCGATGATCACTGTGAGAGTTCGAACCGTGGATACCAGGGTCGATCTAGGACTCCGCCCCGATTAAGGAAGTACAACTTCAGCGTACAATTGTCTCCCGAGATGGATCATCAGCAACGTGTGAATCAGATTCTGAATGCCATGGGTGATATACGCAAAGCCTACGCCAGTTTAAAACTGGAAATAGCATCAATCGAACGTCGACGTAAAAAATTACGTCGCAGAGAACGTGAATTTAGATTATAA
Protein Sequence
MAEEPPYLSVDTDVSAKYKGAFCEAKIRKVVRSVKCKVVFKQGWGSATIPDDQIRGTLRIGAVVEAKHPEKKEFAEATITKIQDCSQYTVVFDDGDITTLRRTALCLKSGRHFAESDTLDQLPLTHPEHFSSPVIGGRRGRRRLDENSEDEELLLISGAELEDEREEHIGRVVCVEGSEKKKQKDNWFPGLVVAPTAQDNVPIHVKEEYLVRSFKDGRYYTVPKKEANEFTREVGARVEHPTLKAAVDKALLYLDCNELPPHWDRDLLLYGLGDVASTDNDAGLDYESSDDEPREEKDHFVAQLYKFMDDSGTPINKGPTIGSRDVDLYKLFKVVQNQGGYNRVTNHNNWKLVALKMGFGQVPITVNLVKIAYKKFLFTFEEFYRKLGCTLLNHPSRLSRSCCRGGRNLIRNKDSGNSSGSLTKTDTKRQVKEVKNQSDLNVPPVKIKVEKDEYSNQSQTQDEELYGEIASDGVSKSPTPPPSTTSTITAISQRTKRNIAAAGGSSITSFQSPTLKIHLPVKIKLEQNENSQPTSPVQTSPTRSTTPPPPPARTRSSSPTQPAAPQQQQHNFLQISRPISPATPALLTQAISTPQNTSPQQQSPNAHKKEPRARQLKKTTIVENIATSSSNITKDLDNIASDLESNVEVSPVKEKKRRAAFPRAVVAAKKVKQYTPRITNPHTPGLAASRTKRAVNKDKLRTIVKNLKSKWVPSSVPGTSNQEITKVTVKSKTTKEDYITNIKNRKDDTQLHSIVSTEDKKKGGRKRRDKRLSEDHFVPLPYYKTILPGDKLRVYYGPTLESKVTYEAKVLSIRTEGSESVYLVHYTGWNNRYDEWIKTSRIADNLSWIPGRTARKANQTPKTPKRKGSHKNDTGGFGSIKDSQQPLMTPTPTSSSASSTSSNSSTTMSKSNITFSMSSGCRKTSTRASTRAAAIKKEIPSTESNTEYDSDTNTESELSKKSSMDSKPNNESDKKSFGKKRKFEEISKSDSNLPIKLEIEDSDEESLNHSRNTEHVDNDENSEDHVLKILKSDAIKKEDVSENESCMNNDNDGGNNLGNVIIVDVELKNESEEDSLVIDENQEIDESEVIEGYSSVAATDSKPDSKLHPTNQTGRDFDLTQIRSELKGIETNVTRPDDIEDLNLEESNTLDIYEFKEPEFETTTTCKMEDKNKTKNNIVVRMFSDVINNVAINQKDSKSNESRIDIVEANNTTATAYSVHNTSADSLSDERPILKTCEEAFDRACAESLRAATEHPPAGFLFMDEEEEEDVYDDDDSQDRLIISERDSDNDIPAEMSIHLPPTDFNQQSTSIQKEVLESKSITALDADCEKEVISRGDDEEDLEDELLNVAIQRAIESSEDTTDGEILSRHLAPRHMFAADTFSPVLDVDNNKIQHDNDTDNIIKISMLATNHHESPASTEVAVKETNRSTASESQLLQQNSALDLSGASEEIQTDSVELLTQDEEMMCEDEVVSQEGAGEPETVIDTLDIESNVGAVGEDEDEDDDDLITVEDLACSQGDISCSQGDLAGAGCGSSSSSGGGGGGGGSARGPHTPPGPAPGTPPDTELDEDYTEQFNANAVIDDQYEEVADQEIDRDEQPPLLTREVEVEDESVVRQELDEEEIACNDEENDDTNLVSLLCEETIPGSPQVAVNSDSYQLSPGTNDEESINEVTISKELQDSIVDKDIKEKDDQVFVANIVENVNNPDNDHQQIGETINNATTSSCRNLQQNAQVNQTPIPSPTSSLSSNNSPSREAIQASHNEVIQPQSSGANEQYQELCPAVVASTSSGITKPTVSESIRTRKSDTRSTSGKKSRRTRKRSEEVAKRKYRSKHHASDSDDHCESSNRGYQGRSRTPPRLRKYNFSVQLSPEMDHQQRVNQILNAMGDIRKAYASLKLEIASIERRRKKLRRREREFRL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-