Basic Information

Gene Symbol
grh
Assembly
None
Location
chr12:4531631-4581460[+]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 0.038 1.6e+02 0.9 0.1 10 58 122 170 113 189 0.79
2 3 2e-10 8.2e-07 28.0 0.1 27 81 421 480 406 487 0.74
3 3 9.6e-45 4e-41 140.2 0.1 85 221 505 637 493 639 0.94

Sequence Information

Coding Sequence
ATGTCCGAAGAGAGCACCGGCGAAGATGAGCCTTCTTGGCGACCGTATTACGAACAGCAACATCCACTGACGGCCGCAACTTCTGCCATGCTGGACATTTCCGGACAAGCGGGACACCATTTACATCACCACCATCTTCTCCATGATTACTATCAAATTGATCATCTAACCCATCACAAGAACAGTGGGGCTGCAAGTAGCCTATTGGGCACTGCTGCGGCAGGTCTGAAAGCTGGCTGCACAGGAACTGGCCTAGATCTGGCCGGCCAGCCCTTGGCCGACATACAGGGATTGTTTCTTGGTCAAGGGGCCGAGGCGGCCGGAGCAGCTGGTGCCGGCCAGGTCAAGAGGGAACCCGAAGATCTCAGCCATAGTCGGCAACAACAACACACAGCTAAAGAATCACATGAAAAAGGTATTAGGCATAAAGTGGTACTCGTGGCCACTACGAACTCTGGGGCGCACCAACAAGATCTCGTGGTCGATGTGGTTAACAATAATAGTAGTGCATCAATTAAGGACGAATTTATGCACTCACCACAGCAAACTAACAGGTCTATGAACGGAACCCCTTCTTCAACTTCATCAATGATGGCCCAAGACGTCGGACCACCTGCTCCTATTGAAATCATTTCCGAAAATCTGAAACCAAGTATAAATTATGGATCGCATCACATTTTCAGCACAATGACCGCCGGCCATACGGCCGATCAAGACAGCGACTCTCCATCGCCAAATCCATATACTGAACATCATTATAGTAGTGGCAGTTCAGCCGTGGCCAGTGCACACCATACCGGATATTTGCAAGGCGCTTCTAGCCGACAACCAACAGCTTTGTCCACATCATTCACTGATCCATATTACAGAGAATACTTCGCTGATACCAGCTATGCTGCACAGCTGAGGAATTTCGCTGATGGACCCGAACCGCCTGCTACTATTGTTGAAAGGTATGTCCGACAAAGTTCAGCATATCACAACAAAGGCGTGATAGCTGCAGCAGGCTTAACGGTGGACCTACCCTCACCAGATAGTGGCATTGGAGCAGATGCAATAACACCCAGGGATCAGACTACCATACAACAGTCATTCGAATATTCAGACATGTGCCCTGGTCCATTATTGACTGAGAGCGGGTGTCCTCGAGCGAGTTCTGCCCATTCATCACCCGGCACAGTGCCAGCCAGGTCTAGACCGTGGCATGATTTTGGCCGACAGAATGATGCCGATAAAATACAAATACCTAAAGTGTTCTCACAGTATGGTTTCAAATACCATCTGGAGACTCCGATCTCAACAAATCAAAGAAGGGAAGATGACAGGGTGACTTACATCAATAAAGGTCAATTCTATGGTATTACTATGGAGTATATACCAGATCCAGATAGGCCTCTAAAAACGCAGACTGTAAAAGTAAGTACTTATATTAAATCTGTTATTGTAGCATCGCTCAATGTATACGGTTATTTTATTTTACTTTTGGGAACATGGTCAACAGTGACCAGTACGGCCTCAAGGGAAGAGAAAAGCCCTGATGATGAAATCAAAGCTTGGCAATTTTGGCATGGAAGGCAGCATTCTGTTAAACAGAGGATTTTAGATGCAGATACCAAAAACAGTGTGGGCTTTGTTGGATGCATTGAAGAAGTAGCACATAATGCGATTGCTGTGTACTGGAACCCATTAGAAAGTTCTGCAAAGTTGAACATAGCTGTCCAATGCTTGAGCACAGATTTTAGCAGTCAGAAAGGTGTTAAGGGCTTACCGTTACATATACAAATTGATACATATGAAGACCCCAGAGAAGGACCAGTAATACATCGTGGATATTGCCAGATTAAAGTTTTTTGTGATAAAGGTGCCGAAAGAAAGACTAGAGATGAAGAAAGAAGGGCTGCTAAAAGAAAAATGGCAGCAACTGGTAGGAAAAAAATTGAAGAATTATATCATCCAGCTTGCGAAAGATCTGAATTCTACAGCATGGCAGATTTGACTAAACCTCCTGTACTGTTTTCACCGGCTGAAGATATTGATAAACTCACTTCGATGGAATTATCAGGATTTTATGGACACGACACTGATGCATCTAGTTTGTCAAACGGTGAGGCAGGTCCGTTAAAGCACAGTTCTCCATACCTGCTTCATTCAGTCCCCGCGGCAAAGCCGGGCGGCTGTCTAACTGGTCAGACGCTTAAGTTCCACAACCACTTTCCACCGGACGCTGCCATTAATGATAAGAAAGATGAAACACTGACAGCTGCCACGGAAAGTGGCGTGGTCTTCTCAAGCCCACCACTGAAAAGGCCAAAACTTGTTCCACCTTTAAACGAACGAGTTATGCTTTATGTAAGGCAAGAATCAGAAGATGTGTATACACCGCTTCATATAGTGCCGCCAACAACTACTGGCCTTTTAAATGCGATTGAGAATAAGTACAAAATTTCTGCTTCAAGCATTAGTAACTTATATAGAAAAAACAGAAAAGGGATTATGGCAAAAATTGATGAAGAAATGTTGACATACTACTGTAACGAAGACTTGTTCATACTTGAGTTTAGACATTCAGAAGAAAGTGAAGATCTGCTTGATATTATCCTAGCAGAACTTCCAGAACATTAG
Protein Sequence
MSEESTGEDEPSWRPYYEQQHPLTAATSAMLDISGQAGHHLHHHHLLHDYYQIDHLTHHKNSGAASSLLGTAAAGLKAGCTGTGLDLAGQPLADIQGLFLGQGAEAAGAAGAGQVKREPEDLSHSRQQQHTAKESHEKGIRHKVVLVATTNSGAHQQDLVVDVVNNNSSASIKDEFMHSPQQTNRSMNGTPSSTSSMMAQDVGPPAPIEIISENLKPSINYGSHHIFSTMTAGHTADQDSDSPSPNPYTEHHYSSGSSAVASAHHTGYLQGASSRQPTALSTSFTDPYYREYFADTSYAAQLRNFADGPEPPATIVERYVRQSSAYHNKGVIAAAGLTVDLPSPDSGIGADAITPRDQTTIQQSFEYSDMCPGPLLTESGCPRASSAHSSPGTVPARSRPWHDFGRQNDADKIQIPKVFSQYGFKYHLETPISTNQRREDDRVTYINKGQFYGITMEYIPDPDRPLKTQTVKVSTYIKSVIVASLNVYGYFILLLGTWSTVTSTASREEKSPDDEIKAWQFWHGRQHSVKQRILDADTKNSVGFVGCIEEVAHNAIAVYWNPLESSAKLNIAVQCLSTDFSSQKGVKGLPLHIQIDTYEDPREGPVIHRGYCQIKVFCDKGAERKTRDEERRAAKRKMAATGRKKIEELYHPACERSEFYSMADLTKPPVLFSPAEDIDKLTSMELSGFYGHDTDASSLSNGEAGPLKHSSPYLLHSVPAAKPGGCLTGQTLKFHNHFPPDAAINDKKDETLTAATESGVVFSSPPLKRPKLVPPLNERVMLYVRQESEDVYTPLHIVPPTTTGLLNAIENKYKISASSISNLYRKNRKGIMAKIDEEMLTYYCNEDLFILEFRHSEESEDLLDIILAELPEH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01479211; iTF_01301403;
90% Identity
iTF_01301403;
80% Identity
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