Basic Information

Gene Symbol
XBP1
Assembly
None
Location
chr3:55683910-55687759[+]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 7.1e-16 4.7e-13 48.4 14.9 1 64 67 130 67 131 0.96
2 2 0.00081 0.54 9.8 1.3 29 57 109 137 108 139 0.86

Sequence Information

Coding Sequence
ATGATATTTCGAAAAGTTTTCAAACCGTTGTATACAGAATCAATTCAGAAGGATAAAGTTAGAGAAATGTTGATTGCATCAGCAAATTATCCGTATTCATTACCCTCACATGAGGATAATACTGTTGATTTATCCTATGCGAAGGTTATAACTACTATTAGTCCACCTAAAAGAAAACGCCGATTAGACAATTTAACACCAGATGAAAAGTTATTGAGGAAAAAATTAAAAAATAGAGAAGCAGCACAAACTTCAAGGGATAAAAAGAAGGCCTATATAAATGACTTGGAAGTTACAGTTAAAAAATTGAAAGAACAGAATGAACTTCTTCACAAACGCATACAAATCCTCACCAGTGAGAAGAAAGAATTACAAACGAAAAACGAGAATTTAGAGAAGGTGATTGGGCAAATTTCTCTGTCGGATGTGAATACTGGCGAGCCAGCAGTGCTCATTAGCGCTCCCCTGCCGCGGGATGTACCAGTGATATATGCGACAGTTTTGTCAACTCTTCTTCTACTAACATGTCTAACATTATGGATTTGGACGATTTTGATTGGCTTGATAATATCACAAACCCTTCCAATCTTGAGGAATTGGAGGAAATTGCCAATTCTTTGTCAAAAGAGGCCACTAAATTGGAGGCTGAGATGTCAAAGAATGAAGGAGTGGTGGGGTCGGTACCAGAAATCATGGAATCCTCCAATGTTATTCCATGTATAG
Protein Sequence
MIFRKVFKPLYTESIQKDKVREMLIASANYPYSLPSHEDNTVDLSYAKVITTISPPKRKRRLDNLTPDEKLLRKKLKNREAAQTSRDKKKAYINDLEVTVKKLKEQNELLHKRIQILTSEKKELQTKNENLEKVIGQISLSDVNTGEPAVLISAPLPRDVPVIYATVLSTLLLLTCLTLWIWTILIGLIISQTLPILRNWRKLPILCQKRPLNWRLRCQRMKEWWGRYQKSWNPPMLFHV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-