Basic Information

Transcription Factor Domain

TF Family: zf-GATA
Domain: zf-GATA domain
PFAM: PF00320
TF Group: Zinc-Coordinating Group
Description: This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 1.4 2.2e+04 -2.8 0.3 6 12 37 43 36 45 0.83

2 3 0.5 7.6e+03 -1.4 0.0 9 14 81 86 77 90 0.82

3 3 6.4e-19 9.6e-15 55.9 3.2 1 34 107 139 107 141 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	1.4	2.2e+04	-2.8	0.3	6	12	37	43	36	45	0.83
2	3	0.5	7.6e+03	-1.4	0.0	9	14	81	86	77	90	0.82
3	3	6.4e-19	9.6e-15	55.9	3.2	1	34	107	139	107	141	0.97

Coding Sequence: ATGTTTTCTGGGACAAATACCATGGCATCAACTAGCTACATGGATACATCCAGTCCAAATGTTTATGGAAGTAGCAATGGAGCTGTTGTACAATATGTTGCACCCAGAACTAGTAGTACATCAGCATGGCAAGATCCTTATCAGAATCATCACGTAcatcaccatcatcatcatccgcACTTATctcatcatcatcaacagcaTCAGTTAACCCCACCACCAACAAATACATTTTATCCGACAATGATGTGGCGATCATACGATCATTATAGACCTCATTATGataccaGCGGTATGGAAATGGGCGAAGGTAGAGAATGTGTCAACTGTGGAGCTATCAGCACACCATTATGGCGAAGAGATGGTACTGGCCATTATCTCTGCAATGCTTGCGGCCTATATCATAAAATGAATGGTATGAACAGACCTTTGGTGAAACCGGCCAAGCGGATGGTCAGTCCACATACGGTAAGTTAA
Protein Sequence: MFSGTNTMASTSYMDTSSPNVYGSSNGAVVQYVAPRTSSTSAWQDPYQNHHVHHHHHHPHLSHHHQQHQLTPPPTNTFYPTMMWRSYDHYRPHYDTSGMEMGEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLVKPAKRMVSPHTVS*

Sequence clustering based on sequence similarity using MMseqs2