Basic Information

Insect: Triatoma infestans
Gene Symbol: -
Assembly: GCA_011037195.1
Location: JAAEAF010002944.1:1-22248[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 8.6e-05 0.033 16.6 2.7 1 23 474 496 474 496 0.99

2 8 5.1e-06 0.002 20.5 1.1 1 23 502 524 502 524 0.99

3 8 3e-05 0.011 18.1 1.7 1 23 530 553 530 553 0.97

4 8 3.1e-06 0.0012 21.1 2.0 1 23 559 581 559 581 0.99

5 8 3.7e-05 0.014 17.7 2.4 1 23 587 609 587 609 0.99

6 8 9.5e-06 0.0037 19.6 1.7 1 23 684 706 684 706 0.99

7 8 3.1e-06 0.0012 21.1 5.5 1 23 712 734 712 734 0.98

8 8 0.055 21 7.8 1.2 1 18 740 757 740 757 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	8.6e-05	0.033	16.6	2.7	1	23	474	496	474	496	0.99
2	8	5.1e-06	0.002	20.5	1.1	1	23	502	524	502	524	0.99
3	8	3e-05	0.011	18.1	1.7	1	23	530	553	530	553	0.97
4	8	3.1e-06	0.0012	21.1	2.0	1	23	559	581	559	581	0.99
5	8	3.7e-05	0.014	17.7	2.4	1	23	587	609	587	609	0.99
6	8	9.5e-06	0.0037	19.6	1.7	1	23	684	706	684	706	0.99
7	8	3.1e-06	0.0012	21.1	5.5	1	23	712	734	712	734	0.98
8	8	0.055	21	7.8	1.2	1	18	740	757	740	757	0.95

Sequence Information

Coding Sequence: ATTTGTCATTTCCTGGCCGACAGTACATCATTACAAAATCTGGGAGCAAATAGAGGAGTTTTCTTAACCGAAAATACATCCTTACAATCTCATGTTCTAGTGGCAAATAGAGGATATGTCTTAGCCGAAAATACATCATTACAATCTCACGTTTTGTTGGCAAATAGAGGACATTTCTTAGCCGAAAATACATCATTACAATCTCAGATTTTGGGGATAAACGGAGGACATTTCTTAGCCGGAAATACATCGTTACAGTCTCAACATTTGGAAGCAAATAGAGGACAATATATAGCTGAAAATACATCATTACAATCCCAGGTTGTGCTGGCAGATAGAGGACATTTCTTAGCCGAAAATAATACACCATTACAATCTCAACATATAACTGCAGATAGAGGCCATTTCTTACctgaaaatacattattacaatCTCAAGATGTGGGAACAAATAGGGCAGATGTTGTAACAGAAAATTCATTCTCACATTATCGACATCTACCGGCAGTTAGTGGACATTTCATAGGCGAAAATAAATCTTTACAATTTGAAGATGTGAGGGCAGATATAAAAGATTACTTAGGCGAAAATACATCCTTACAATCTCAGCATCTAGCAGCAGGTACAGGAGATATTTTAGCAGAAAATACGTCATTAAAATATGAAGATGTGGGGCCAGATAGAAAAGATTTCTTAGTCGAAAATACATCATTACAGTCTGAAGATGTGAGGGTAGATAAAGGAGATTTCTTAGtcgaaaatacattattaaaatctGAGGATACGGGGGTAGATAAAGGCAATTTCTTGGTAAAAAATACGTTAATACAATCTGATGATATAGAGGTAGATAGAAAAGATTTCATAGTCGAAAATACATCATCACAGTTTGAAGATGTGGAGGTAGATAGAGAAGATTTTTTGGTCGAAAATACATGTATACAACCAGAAGATGTGGAAGAAGATAGAAAAGATTTCATAGTCGAAAATCCATCATTACAGTATGACGATATGGGAGACAGAGGAGATTTCTCAGCAGAAAATACATCTTTACAATCAGCTGTGAAGGTAGATAGAGGAGATTTCTCAGTAGAAAATACATCTTTACAATCTGAAGATGTGGGTGTTGATAGAGCAGATTTCTCAGCAGAAAATACATCTTTACAATCAGATGTGAAGGTAGATAGAGGAGATTTCTCAGTAGAAAATACATCTTTACAATCTGAAGATGTGGGTGTTGATAGAGATTTCTTAGCCGAAAATACATCTTTACAAGCTAAAGAAATAGAAGGAGATAAAAGAGATTTCTTCGTTGAAAATAGATCATCACAATCTCAAAAAGTGGAAGATAGAGACATGATTACGAATCGTGGACAAGAAGAGAATACCTCCGCAGGGAGGTCTACACGCATGAAGCCATATAGATGTGGTGAATGCGGTTATAGTTGTTCAAAATCAACAGGCATGAAAGCGCACAAGCGAACACATTCTGGGGAGAAGCCGTTCAAATGTTACATATGTGGTTACAGATGTGCGCTATCTGGAAATTTGAATGCACATATACGAACACATTCAAGCGTGAAACCATATATATGTAGTATATGCGAATGCAGTTTTAAAAGACTCAGTTATTTAAAAGGACATATTATGCGAATACATTCAGGAgagaagccttataaatgtagttATTGTGAATACAGTAGTGCACATTCTGGAAATTTAAAAGCACATATACGAAGACATTCTGGGGAGagaccatataaatgtagtcaATGCGACTATAGTTGTATACAGTCCGGAAGTCTGAAAGAACATTTGCAATCACATACtgCAGCTGATAATGTGCCAGATTCTCAAGTTGCTTCGGCACAAATACAAGAAGTGCAAACGGATAACAATGGTTGTCCCCTCGTCCAAGAAAAGAAGGATTTAAAACATAACGTAAGTAACACAGCCGAAAATTCTGATGAACATGATGAATCTGGATACAGTTGTACAACTTCAGAAAATTCGAATGCAGATCCACGTACAAATTCAGATGataagccgtataaatgtagtgattgTAGCTACAGTTGTACTCAACCCGGAAGATTGAAAGCACATATGCAAATACATTCAGACGAGAAGCCGCATAAATGTACtgaatgcgattatagttgCAGAAAACTTAGCAATCTGAAAGCACATATACGGAcgcatacaggcgagaagccatataaatgtagcgAATGCGACTATCGCGGTACAACGTCCAAATCTTTGAAAAAAGAACTTTCTGatgaaaagtataaaaattattatcgaGTGACCCGTGCACAGTTTGCAGAAATTCATGGATTTATTAAAGAAGACATAGAATGTGAAGGATGCAATGCTTCAAAGCCTATCGGAACGGAAGAAAAACTGGCCGTATTTTTAagATACATTGCTTCAGGAAACTGCTTTAAAAGTTTGGGCTACAGCTACAGGGTGAGTGACCGAACAGTATCCAAAATTGTTAATGAAGTAGCAGGAGCTATTTAG
Protein Sequence: ICHFLADSTSLQNLGANRGVFLTENTSLQSHVLVANRGYVLAENTSLQSHVLLANRGHFLAENTSLQSQILGINGGHFLAGNTSLQSQHLEANRGQYIAENTSLQSQVVLADRGHFLAENNTPLQSQHITADRGHFLPENTLLQSQDVGTNRADVVTENSFSHYRHLPAVSGHFIGENKSLQFEDVRADIKDYLGENTSLQSQHLAAGTGDILAENTSLKYEDVGPDRKDFLVENTSLQSEDVRVDKGDFLVENTLLKSEDTGVDKGNFLVKNTLIQSDDIEVDRKDFIVENTSSQFEDVEVDREDFLVENTCIQPEDVEEDRKDFIVENPSLQYDDMGDRGDFSAENTSLQSAVKVDRGDFSVENTSLQSEDVGVDRADFSAENTSLQSDVKVDRGDFSVENTSLQSEDVGVDRDFLAENTSLQAKEIEGDKRDFFVENRSSQSQKVEDRDMITNRGQEENTSAGRSTRMKPYRCGECGYSCSKSTGMKAHKRTHSGEKPFKCYICGYRCALSGNLNAHIRTHSSVKPYICSICECSFKRLSYLKGHIMRIHSGEKPYKCSYCEYSSAHSGNLKAHIRRHSGERPYKCSQCDYSCIQSGSLKEHLQSHTAADNVPDSQVASAQIQEVQTDNNGCPLVQEKKDLKHNVSNTAENSDEHDESGYSCTTSENSNADPRTNSDDKPYKCSDCSYSCTQPGRLKAHMQIHSDEKPHKCTECDYSCRKLSNLKAHIRTHTGEKPYKCSECDYRGTTSKSLKKELSDEKYKNYYRVTRAQFAEIHGFIKEDIECEGCNASKPIGTEEKLAVFLRYIASGNCFKSLGYSYRVSDRTVSKIVNEVAGAI*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -